CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1381I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31381A1381IA2199InonsynGCaATa1581010.6392416860-6862
ORF1ab/nsp31381A1381IA2199InonsynGCAATT158570.3607596860-6862

Details of the mutation A1381I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31381A1381IGCaATa101158All0.000019
ORF1ab/nsp31381A1381IGCAATT57158All0.000011
ORF1ab/nsp31381A1381IGCaATa6293AY.250.000373
ORF1ab/nsp31381A1381IGCAATT3193AY.250.000186
ORF1ab/nsp31381A1381IGCaATa1221B.1.1.70.000011
ORF1ab/nsp31381A1381IGCAATT921B.1.1.70.000008
ORF1ab/nsp31381A1381IGCaATa611AY.1030.000037
ORF1ab/nsp31381A1381IGCAATT511AY.1030.000031
ORF1ab/nsp31381A1381IGCaATa35AY.260.000085
ORF1ab/nsp31381A1381IGCAATT25AY.260.000057
ORF1ab/nsp31381A1381IGCaATa35AY.440.000018
ORF1ab/nsp31381A1381IGCAATT25AY.440.000012
ORF1ab/nsp31381A1381IGCaATa34AY.30.00003
ORF1ab/nsp31381A1381IGCAATT14AY.30.00001
ORF1ab/nsp31381A1381IGCAATT24P.10.000032
ORF1ab/nsp31381A1381IGCaATa24P.10.000032
ORF1ab/nsp31381A1381IGCaATa23AY.470.000062
ORF1ab/nsp31381A1381IGCAATT13AY.470.000031
ORF1ab/nsp31381A1381IGCaATa12AY.200.000039
ORF1ab/nsp31381A1381IGCAATT12AY.200.000039
ORF1ab/nsp31381A1381IGCAATT12AY.230.00007
ORF1ab/nsp31381A1381IGCaATa12AY.230.00007
ORF1ab/nsp31381A1381IGCAATT12B.1.5760.000907
ORF1ab/nsp31381A1381IGCaATa12B.1.5760.000907
ORF1ab/nsp31381A1381IGCAATT12B.1.6210.000089
ORF1ab/nsp31381A1381IGCaATa12B.1.6210.000089
ORF1ab/nsp31381A1381IGCaATa11B.1.10.000018
ORF1ab/nsp31381A1381IGCaATa11B.1.2210.000071
ORF1ab/nsp31381A1381IGCaATa11B.1.2580.000067
ORF1ab/nsp31381A1381IGCaATa11C.370.000116