CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1374V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31374A1374VA2192VnonsyngCagTa286128590.9993016839-6841
ORF1ab/nsp31374A1374VA2192VnonsyngCAgTC286110.0003495286839-6841
ORF1ab/nsp31374A1374VA2192VnonsyngCAgTT286110.0003495286839-6841

Details of the mutation A1374V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31374A1374VgCagTa28592861All0.000547
ORF1ab/nsp31374A1374VgCAgTT12861All0
ORF1ab/nsp31374A1374VgCAgTC12861All0
ORF1ab/nsp31374A1374VgCagTa901901B.1.617.20.003393
ORF1ab/nsp31374A1374VgCagTa536536AY.970.911565
ORF1ab/nsp31374A1374VgCagTa181181B.1.1.70.000162
ORF1ab/nsp31374A1374VgCagTa140140AY.4.20.003036
ORF1ab/nsp31374A1374VgCagTa129129AY.50.002664
ORF1ab/nsp31374A1374VgCagTa109109AY.200.004236
ORF1ab/nsp31374A1374VgCagTa8888AY.250.000529
ORF1ab/nsp31374A1374VgCagTa7878AY.390.001927
ORF1ab/nsp31374A1374VgCagTa6363AY.40.000098
ORF1ab/nsp31374A1374VgCagTa5151AY.430.000226
ORF1ab/nsp31374A1374VgCagTa5151AY.440.00031
ORF1ab/nsp31374A1374VgCagTa4848AY.1030.000298
ORF1ab/nsp31374A1374VgCagTa3131AY.30.000308
ORF1ab/nsp31374A1374VgCagTa2323AY.1200.000855
ORF1ab/nsp31374A1374VgCagTa2222AY.290.000347
ORF1ab/nsp31374A1374VgCagTa1717AD.20.003722
ORF1ab/nsp31374A1374VgCagTa1717AY.1020.000451
ORF1ab/nsp31374A1374VgCagTa1717AY.260.000481
ORF1ab/nsp31374A1374VgCagTa1616AY.730.010645
ORF1ab/nsp31374A1374VgCagTa1515B.1.1770.000198
ORF1ab/nsp31374A1374VgCagTa1414AY.340.001358
ORF1ab/nsp31374A1374VgCagTa1414B.1.10.000254
ORF1ab/nsp31374A1374VgCagTa1414P.10.000221
ORF1ab/nsp31374A1374VgCagTa1313AY.99.20.001198
ORF1ab/nsp31374A1374VgCagTa1111B.10.000101
ORF1ab/nsp31374A1374VgCagTa1111B.1.1.5190.000437
ORF1ab/nsp31374A1374VgCagTa1111B.1.20.000097
ORF1ab/nsp31374A1374VgCagTa88B.1.1.4120.061069
ORF1ab/nsp31374A1374VgCagTa77B.1.2340.000924
ORF1ab/nsp31374A1374VgCagTa77B.1.4290.000165
ORF1ab/nsp31374A1374VgCagTa66AY.420.000241
ORF1ab/nsp31374A1374VgCagTa66AY.470.000187
ORF1ab/nsp31374A1374VgCagTa66D.20.00045
ORF1ab/nsp31374A1374VgCagTa55AY.140.00044
ORF1ab/nsp31374A1374VgCagTa55AY.4.50.000537
ORF1ab/nsp31374A1374VgCagTa55AY.860.004149
ORF1ab/nsp31374A1374VgCagTa55B.1.1600.000156
ORF1ab/nsp31374A1374VgCagTa55B.1.177.860.000917
ORF1ab/nsp31374A1374VgCagTa35B.1.2210.000213
ORF1ab/nsp31374A1374VgCAgTC15B.1.2210.000071
ORF1ab/nsp31374A1374VgCAgTT15B.1.2210.000071
ORF1ab/nsp31374A1374VgCagTa55B.1.221.10.014535
ORF1ab/nsp31374A1374VgCagTa55B.1.4270.000252
ORF1ab/nsp31374A1374VgCagTa55P.20.000933
ORF1ab/nsp31374A1374VgCagTa44AY.1170.000338
ORF1ab/nsp31374A1374VgCagTa44AY.1190.000141
ORF1ab/nsp31374A1374VgCagTa44AY.450.000487
ORF1ab/nsp31374A1374VgCagTa44AY.460.000416
ORF1ab/nsp31374A1374VgCagTa44AY.640.002381
ORF1ab/nsp31374A1374VgCagTa44AY.710.0019
ORF1ab/nsp31374A1374VgCagTa44AY.9.20.000147
ORF1ab/nsp31374A1374VgCagTa44B.1.360.000584
ORF1ab/nsp31374A1374VgCagTa33AY.1130.000427
ORF1ab/nsp31374A1374VgCagTa33AY.120.10.000963
ORF1ab/nsp31374A1374VgCagTa33AY.360.000445
ORF1ab/nsp31374A1374VgCagTa33AY.5.40.00083
ORF1ab/nsp31374A1374VgCagTa33AY.610.000314
ORF1ab/nsp31374A1374VgCagTa33AY.750.000168
ORF1ab/nsp31374A1374VgCagTa33B.1.258.170.000312
ORF1ab/nsp31374A1374VgCagTa33B.1.5250.000339
ORF1ab/nsp31374A1374VgCagTa33B.1.5260.000071
ORF1ab/nsp31374A1374VgCagTa33B.1.6210.000266
ORF1ab/nsp31374A1374VgCagTa22AY.1000.000092
ORF1ab/nsp31374A1374VgCagTa22AY.1180.000125
ORF1ab/nsp31374A1374VgCagTa22AY.160.000759
ORF1ab/nsp31374A1374VgCagTa22AY.39.10.000079
ORF1ab/nsp31374A1374VgCagTa22AY.7.20.001119
ORF1ab/nsp31374A1374VgCagTa22AY.700.000417
ORF1ab/nsp31374A1374VgCagTa22AY.90.000135
ORF1ab/nsp31374A1374VgCagTa22AY.980.000158
ORF1ab/nsp31374A1374VgCagTa22B.1.1.1980.002937
ORF1ab/nsp31374A1374VgCagTa22B.1.1.2140.000111
ORF1ab/nsp31374A1374VgCagTa22B.1.1.390.001019
ORF1ab/nsp31374A1374VgCagTa22B.1.1.830.00542
ORF1ab/nsp31374A1374VgCagTa22B.1.1.990.047619
ORF1ab/nsp31374A1374VgCagTa22B.1.177.600.000437
ORF1ab/nsp31374A1374VgCagTa22B.1.3510.000059
ORF1ab/nsp31374A1374VgCagTa22B.1.36.290.001035
ORF1ab/nsp31374A1374VgCagTa22B.1.4000.000858
ORF1ab/nsp31374A1374VgCagTa22B.1.5270.007407
ORF1ab/nsp31374A1374VgCagTa22C.370.000232
ORF1ab/nsp31374A1374VgCagTa11A.20.000662
ORF1ab/nsp31374A1374VgCagTa11AY.1010.00049
ORF1ab/nsp31374A1374VgCagTa11AY.1080.001103
ORF1ab/nsp31374A1374VgCagTa11AY.1110.000183
ORF1ab/nsp31374A1374VgCagTa11AY.1160.000287
ORF1ab/nsp31374A1374VgCagTa11AY.16.10.00047
ORF1ab/nsp31374A1374VgCagTa11AY.230.00007
ORF1ab/nsp31374A1374VgCagTa11AY.29.10.000221
ORF1ab/nsp31374A1374VgCagTa11AY.3.10.000085
ORF1ab/nsp31374A1374VgCagTa11AY.330.000067
ORF1ab/nsp31374A1374VgCagTa11AY.370.000316
ORF1ab/nsp31374A1374VgCagTa11AY.46.40.000165
ORF1ab/nsp31374A1374VgCagTa11AY.590.00053
ORF1ab/nsp31374A1374VgCagTa11AY.650.000533
ORF1ab/nsp31374A1374VgCagTa11AY.7.10.000113
ORF1ab/nsp31374A1374VgCagTa11AY.740.000116
ORF1ab/nsp31374A1374VgCagTa11AY.770.001127
ORF1ab/nsp31374A1374VgCagTa11AY.780.001541
ORF1ab/nsp31374A1374VgCagTa11AY.910.00073
ORF1ab/nsp31374A1374VgCagTa11AY.920.000287
ORF1ab/nsp31374A1374VgCagTa11AY.98.10.000048
ORF1ab/nsp31374A1374VgCagTa11B0.000128
ORF1ab/nsp31374A1374VgCagTa11B.1.1.1530.001095
ORF1ab/nsp31374A1374VgCagTa11B.1.1.2220.000204
ORF1ab/nsp31374A1374VgCagTa11B.1.1.2650.003155
ORF1ab/nsp31374A1374VgCagTa11B.1.1.3370.003597
ORF1ab/nsp31374A1374VgCagTa11B.1.1.3430.020833
ORF1ab/nsp31374A1374VgCagTa11B.1.1.3470.018182
ORF1ab/nsp31374A1374VgCagTa11B.1.1.370.000193
ORF1ab/nsp31374A1374VgCagTa11B.1.1.3750.011905
ORF1ab/nsp31374A1374VgCagTa11B.1.1.5230.001563
ORF1ab/nsp31374A1374VgCagTa11B.1.1.540.003021
ORF1ab/nsp31374A1374VgCagTa11B.1.1.670.004566
ORF1ab/nsp31374A1374VgCagTa11B.1.1390.000733
ORF1ab/nsp31374A1374VgCagTa11B.1.177.150.000631
ORF1ab/nsp31374A1374VgCagTa11B.1.177.40.000211
ORF1ab/nsp31374A1374VgCagTa11B.1.177.440.000519
ORF1ab/nsp31374A1374VgCagTa11B.1.177.570.000281
ORF1ab/nsp31374A1374VgCagTa11B.1.177.750.001041
ORF1ab/nsp31374A1374VgCagTa11B.1.2060.000816
ORF1ab/nsp31374A1374VgCagTa11B.1.2320.000537
ORF1ab/nsp31374A1374VgCagTa11B.1.2430.00007
ORF1ab/nsp31374A1374VgCagTa11B.1.3490.000715
ORF1ab/nsp31374A1374VgCagTa11B.1.36.170.000494
ORF1ab/nsp31374A1374VgCagTa11B.1.3620.001541
ORF1ab/nsp31374A1374VgCagTa11B.1.438.10.000107
ORF1ab/nsp31374A1374VgCagTa11B.1.5510.00129
ORF1ab/nsp31374A1374VgCagTa11B.1.5820.000491
ORF1ab/nsp31374A1374VgCagTa11B.1.5950.000261
ORF1ab/nsp31374A1374VgCagTa11B.1.5960.000087
ORF1ab/nsp31374A1374VgCagTa11B.1.9.50.005682
ORF1ab/nsp31374A1374VgCagTa11N.30.005814
ORF1ab/nsp31374A1374VgCagTa11P.1.10.000318
ORF1ab/nsp31374A1374VgCagTa11P.1.140.000048
ORF1ab/nsp31374A1374VgCagTa11P.1.170.000162