CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1305A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31305A1305AA2123AsyngcTgcC9569400.9832646632-6634
ORF1ab/nsp31305A1305AA2123AsyngcTgcA95680.00836826632-6634
ORF1ab/nsp31305A1305AA2123AsyngcTgcG95680.00836826632-6634

Details of the mutation A1305A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31305A1305AgcTgcC940956All0.00018
ORF1ab/nsp31305A1305AgcTgcA8956All0.000002
ORF1ab/nsp31305A1305AgcTgcG8956All0.000002
ORF1ab/nsp31305A1305AgcTgcC251253B.1.1.70.000225
ORF1ab/nsp31305A1305AgcTgcG1253B.1.1.70.000001
ORF1ab/nsp31305A1305AgcTgcA1253B.1.1.70.000001
ORF1ab/nsp31305A1305AgcTgcC203203AY.1060.067984
ORF1ab/nsp31305A1305AgcTgcC8989AY.1030.000553
ORF1ab/nsp31305A1305AgcTgcC4041AY.250.000241
ORF1ab/nsp31305A1305AgcTgcG141AY.250.000006
ORF1ab/nsp31305A1305AgcTgcC3737AY.340.003588
ORF1ab/nsp31305A1305AgcTgcC3535B.1.617.20.000132
ORF1ab/nsp31305A1305AgcTgcC3434P.1.140.001625
ORF1ab/nsp31305A1305AgcTgcC2828AY.30.000278
ORF1ab/nsp31305A1305AgcTgcC2424AY.350.005593
ORF1ab/nsp31305A1305AgcTgcC1717B.1.220.022398
ORF1ab/nsp31305A1305AgcTgcC1515AY.40.000023
ORF1ab/nsp31305A1305AgcTgcC1414B.1.20.000123
ORF1ab/nsp31305A1305AgcTgcC1111C.370.001277
ORF1ab/nsp31305A1305AgcTgcC1111Q.80.001814
ORF1ab/nsp31305A1305AgcTgcC1010AY.1200.000372
ORF1ab/nsp31305A1305AgcTgcC910AY.440.000055
ORF1ab/nsp31305A1305AgcTgcA110AY.440.000006
ORF1ab/nsp31305A1305AgcTgcC99P.10.000142
ORF1ab/nsp31305A1305AgcTgcC88B.1.1.5190.000318
ORF1ab/nsp31305A1305AgcTgcC77AY.1110.001282
ORF1ab/nsp31305A1305AgcTgcC56B.1.1770.000066
ORF1ab/nsp31305A1305AgcTgcG16B.1.1770.000013
ORF1ab/nsp31305A1305AgcTgcC44AY.1190.000141
ORF1ab/nsp31305A1305AgcTgcC44AY.430.000018
ORF1ab/nsp31305A1305AgcTgcC34B.1.10.000054
ORF1ab/nsp31305A1305AgcTgcG14B.1.10.000018
ORF1ab/nsp31305A1305AgcTgcC23AY.200.000078
ORF1ab/nsp31305A1305AgcTgcA13AY.200.000039
ORF1ab/nsp31305A1305AgcTgcC33AY.230.000209
ORF1ab/nsp31305A1305AgcTgcC33AY.980.000237
ORF1ab/nsp31305A1305AgcTgcC23B.10.000018
ORF1ab/nsp31305A1305AgcTgcG13B.10.000009
ORF1ab/nsp31305A1305AgcTgcC33B.1.4290.000071
ORF1ab/nsp31305A1305AgcTgcC22AY.1170.000169
ORF1ab/nsp31305A1305AgcTgcC22AY.260.000057
ORF1ab/nsp31305A1305AgcTgcC22AY.330.000134
ORF1ab/nsp31305A1305AgcTgcC22AY.360.000296
ORF1ab/nsp31305A1305AgcTgcC22AY.50.000041
ORF1ab/nsp31305A1305AgcTgcC22AY.98.10.000097
ORF1ab/nsp31305A1305AgcTgcA12B.1.1.2220.000204
ORF1ab/nsp31305A1305AgcTgcC12B.1.1.2220.000204
ORF1ab/nsp31305A1305AgcTgcC22B.1.1.4870.011173
ORF1ab/nsp31305A1305AgcTgcC22B.1.3510.000059
ORF1ab/nsp31305A1305AgcTgcA22B.1.4000.000858
ORF1ab/nsp31305A1305AgcTgcG12B.1.4270.00005
ORF1ab/nsp31305A1305AgcTgcC12B.1.4270.00005
ORF1ab/nsp31305A1305AgcTgcG22B.1.5960.000174
ORF1ab/nsp31305A1305AgcTgcC22B.1.6210.000177
ORF1ab/nsp31305A1305AgcTgcC110.055556
ORF1ab/nsp31305A1305AgcTgcC11A.20.000662
ORF1ab/nsp31305A1305AgcTgcA11AY.1000.000046
ORF1ab/nsp31305A1305AgcTgcC11AY.1020.000027
ORF1ab/nsp31305A1305AgcTgcC11AY.1100.000113
ORF1ab/nsp31305A1305AgcTgcC11AY.1160.000287
ORF1ab/nsp31305A1305AgcTgcC11AY.1210.000135
ORF1ab/nsp31305A1305AgcTgcC11AY.390.000025
ORF1ab/nsp31305A1305AgcTgcC11AY.4.20.000022
ORF1ab/nsp31305A1305AgcTgcC11AY.410.000294
ORF1ab/nsp31305A1305AgcTgcC11AY.450.000122
ORF1ab/nsp31305A1305AgcTgcC11AY.5.30.000337
ORF1ab/nsp31305A1305AgcTgcC11AY.540.000095
ORF1ab/nsp31305A1305AgcTgcC11AY.610.000105
ORF1ab/nsp31305A1305AgcTgcC11AY.7.10.000113
ORF1ab/nsp31305A1305AgcTgcC11AY.790.001211
ORF1ab/nsp31305A1305AgcTgcA11AY.9.10.000084
ORF1ab/nsp31305A1305AgcTgcC11AY.9.20.000037
ORF1ab/nsp31305A1305AgcTgcC11AY.950.000761
ORF1ab/nsp31305A1305AgcTgcC11B.1.1.3060.000438
ORF1ab/nsp31305A1305AgcTgcC11B.1.1.4640.001473
ORF1ab/nsp31305A1305AgcTgcC11B.1.1600.000031
ORF1ab/nsp31305A1305AgcTgcC11B.1.160.160.000929
ORF1ab/nsp31305A1305AgcTgcC11B.1.1700.00431
ORF1ab/nsp31305A1305AgcTgcC11B.1.177.200.001517
ORF1ab/nsp31305A1305AgcTgcC11B.1.177.210.000076
ORF1ab/nsp31305A1305AgcTgcC11B.1.2430.00007
ORF1ab/nsp31305A1305AgcTgcC11B.1.351.30.000876
ORF1ab/nsp31305A1305AgcTgcC11B.1.360.000146
ORF1ab/nsp31305A1305AgcTgcC11B.1.3670.000792
ORF1ab/nsp31305A1305AgcTgcC11B.1.4410.009615
ORF1ab/nsp31305A1305AgcTgcC11B.1.5260.000024
ORF1ab/nsp31305A1305AgcTgcC11B.1.5610.000397
ORF1ab/nsp31305A1305AgcTgcC11B.1.5950.000261
ORF1ab/nsp31305A1305AgcTgcC11B.1.617.10.000129
ORF1ab/nsp31305A1305AgcTgcC11B.1.621.10.000506
ORF1ab/nsp31305A1305AgcTgcC11B.1.6370.000073
ORF1ab/nsp31305A1305AgcTgcC11B.100.008264
ORF1ab/nsp31305A1305AgcTgcC11B.60.00091
ORF1ab/nsp31305A1305AgcTgcC11P.1.170.000162
ORF1ab/nsp31305A1305AgcTgcC11Q.70.001111