CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1179del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31179A1179delA1997deldelGCA---313116254-6256

Details of the mutation A1179del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31179A1179delGCA---3131All0.000006
ORF1ab/nsp31179A1179delGCA---1111B.1.1.70.00001
ORF1ab/nsp31179A1179delGCA---33AY.250.000018
ORF1ab/nsp31179A1179delGCA---22AY.430.000009
ORF1ab/nsp31179A1179delGCA---22B.10.000018
ORF1ab/nsp31179A1179delGCA---22B.1.10.000036
ORF1ab/nsp31179A1179delGCA---11AY.40.000002
ORF1ab/nsp31179A1179delGCA---11AY.5.30.000337
ORF1ab/nsp31179A1179delGCA---11AY.610.000105
ORF1ab/nsp31179A1179delGCA---11AY.660.00107
ORF1ab/nsp31179A1179delGCA---11AY.850.000427
ORF1ab/nsp31179A1179delGCA---11B.1.1.3150.008475
ORF1ab/nsp31179A1179delGCA---11B.1.1.3480.000796
ORF1ab/nsp31179A1179delGCA---11B.1.1.4090.002833
ORF1ab/nsp31179A1179delGCA---11B.1.1770.000013
ORF1ab/nsp31179A1179delGCA---11B.1.177.620.001192
ORF1ab/nsp31179A1179delGCA---11B.1.2580.000067