CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1179X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31179A1179XA1997XnonsynGCaTAa62480.7741946254-6256
ORF1ab/nsp31179A1179XA1997XnonsynGCATAG62100.161296254-6256
ORF1ab/nsp31179A1179XA1997XnonsynGCaTGa6240.06451616254-6256

Details of the mutation A1179X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31179A1179XGCaTAa4862All0.000009
ORF1ab/nsp31179A1179XGCATAG1062All0.000002
ORF1ab/nsp31179A1179XGCaTGa462All0.000001
ORF1ab/nsp31179A1179XGCaTAa4559B.1.1.70.00004
ORF1ab/nsp31179A1179XGCATAG1059B.1.1.70.000009
ORF1ab/nsp31179A1179XGCaTGa459B.1.1.70.000004
ORF1ab/nsp31179A1179XGCaTAa11AY.250.000006
ORF1ab/nsp31179A1179XGCaTAa11B.10.000009
ORF1ab/nsp31179A1179XGCaTAa11P.10.000016