CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1179I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31179A1179IA1997InonsynGCAATT117610.5213686254-6256
ORF1ab/nsp31179A1179IA1997InonsynGCaATa117560.4786326254-6256

Details of the mutation A1179I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31179A1179IGCAATT61117All0.000012
ORF1ab/nsp31179A1179IGCaATa56117All0.000011
ORF1ab/nsp31179A1179IGCAATT55105B.1.1.70.000049
ORF1ab/nsp31179A1179IGCaATa50105B.1.1.70.000045
ORF1ab/nsp31179A1179IGCAATT24B.10.000018
ORF1ab/nsp31179A1179IGCaATa24B.10.000018
ORF1ab/nsp31179A1179IGCAATT24P.10.000032
ORF1ab/nsp31179A1179IGCaATa24P.10.000032
ORF1ab/nsp31179A1179IGCaATa12AY.250.000006
ORF1ab/nsp31179A1179IGCAATT12AY.250.000006
ORF1ab/nsp31179A1179IGCaATa11B.1.2410.000812
ORF1ab/nsp31179A1179IGCAATT11B.1.5760.000907