CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = A1120S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31120A1120SA1938SnonsynGctTct106610630.9971866077-6079
ORF1ab/nsp31120A1120SA1938SnonsynGCTAGC106620.001876176077-6079
ORF1ab/nsp31120A1120SA1938SnonsynGcTTcA106610.0009380866077-6079

Details of the mutation A1120S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31120A1120SGctTct10631066All0.000203
ORF1ab/nsp31120A1120SGCTAGC21066All0
ORF1ab/nsp31120A1120SGcTTcA11066All0
ORF1ab/nsp31120A1120SGctTct463463B.1.36.211
ORF1ab/nsp31120A1120SGctTct169169B.1.1.70.000151
ORF1ab/nsp31120A1120SGctTct8686AY.40.000134
ORF1ab/nsp31120A1120SGctTct3636AY.430.000159
ORF1ab/nsp31120A1120SGctTct3030P.10.000473
ORF1ab/nsp31120A1120SGctTct2626B.1.617.20.000098
ORF1ab/nsp31120A1120SGctTct1616AY.250.000096
ORF1ab/nsp31120A1120SGctTct1616AY.440.000097
ORF1ab/nsp31120A1120SGctTct1616B.1.1770.000211
ORF1ab/nsp31120A1120SGctTct1515B.1.1.3260.026408
ORF1ab/nsp31120A1120SGctTct1515B.1.20.000132
ORF1ab/nsp31120A1120SGctTct1313AY.1030.000081
ORF1ab/nsp31120A1120SGctTct1112AY.30.000109
ORF1ab/nsp31120A1120SGcTTcA112AY.30.00001
ORF1ab/nsp31120A1120SGctTct1111B.10.000101
ORF1ab/nsp31120A1120SGctTct1010AY.670.004643
ORF1ab/nsp31120A1120SGctTct88AY.420.000322
ORF1ab/nsp31120A1120SGctTct77AY.290.00011
ORF1ab/nsp31120A1120SGctTct66AY.200.000233
ORF1ab/nsp31120A1120SGctTct44AY.1180.000251
ORF1ab/nsp31120A1120SGctTct44AY.4.20.000087
ORF1ab/nsp31120A1120SGctTct44AY.50.000083
ORF1ab/nsp31120A1120SGctTct44B.1.177.580.005326
ORF1ab/nsp31120A1120SGctTct44B.1.360.000584
ORF1ab/nsp31120A1120SGctTct44B.1.36.260.011429
ORF1ab/nsp31120A1120SGctTct44B.1.4200.041667
ORF1ab/nsp31120A1120SGctTct33AY.260.000085
ORF1ab/nsp31120A1120SGctTct33AY.340.000291
ORF1ab/nsp31120A1120SGctTct33AY.390.000074
ORF1ab/nsp31120A1120SGctTct33AY.470.000093
ORF1ab/nsp31120A1120SGctTct33AY.60.000123
ORF1ab/nsp31120A1120SGctTct33B.1.3200.003736
ORF1ab/nsp31120A1120SGctTct33B.1.5960.000261
ORF1ab/nsp31120A1120SGctTct33C.370.000348
ORF1ab/nsp31120A1120SGctTct33P.1.150.000697
ORF1ab/nsp31120A1120SGctTct33Q.80.000495
ORF1ab/nsp31120A1120SGCTAGC220.111111
ORF1ab/nsp31120A1120SGctTct22AY.1020.000053
ORF1ab/nsp31120A1120SGctTct22AY.460.000208
ORF1ab/nsp31120A1120SGctTct22AY.610.00021
ORF1ab/nsp31120A1120SGctTct22AY.750.000112
ORF1ab/nsp31120A1120SGctTct22B.1.10.000036
ORF1ab/nsp31120A1120SGctTct22B.1.3690.00057
ORF1ab/nsp31120A1120SGctTct22B.1.4350.022727
ORF1ab/nsp31120A1120SGctTct22Q.10.000253
ORF1ab/nsp31120A1120SGctTct11AY.1000.000046
ORF1ab/nsp31120A1120SGctTct11AY.1130.000142
ORF1ab/nsp31120A1120SGctTct11AY.1190.000035
ORF1ab/nsp31120A1120SGctTct11AY.1200.000037
ORF1ab/nsp31120A1120SGctTct11AY.23.10.000417
ORF1ab/nsp31120A1120SGctTct11AY.240.000431
ORF1ab/nsp31120A1120SGctTct11AY.270.000065
ORF1ab/nsp31120A1120SGctTct11AY.320.000532
ORF1ab/nsp31120A1120SGctTct11AY.330.000067
ORF1ab/nsp31120A1120SGctTct11AY.4.2.10.000149
ORF1ab/nsp31120A1120SGctTct11AY.450.000122
ORF1ab/nsp31120A1120SGctTct11AY.5.40.000277
ORF1ab/nsp31120A1120SGctTct11AY.520.000814
ORF1ab/nsp31120A1120SGctTct11AY.99.20.000092
ORF1ab/nsp31120A1120SGctTct11B.1.1.2220.000204
ORF1ab/nsp31120A1120SGctTct11B.1.1.250.000569
ORF1ab/nsp31120A1120SGctTct11B.1.1.4170.002703
ORF1ab/nsp31120A1120SGctTct11B.1.1.500.000679
ORF1ab/nsp31120A1120SGctTct11B.1.1.5190.00004
ORF1ab/nsp31120A1120SGctTct11B.1.177.600.000218
ORF1ab/nsp31120A1120SGctTct11B.1.177.650.000665
ORF1ab/nsp31120A1120SGctTct11B.1.2390.001221
ORF1ab/nsp31120A1120SGctTct11B.1.2400.000216
ORF1ab/nsp31120A1120SGctTct11B.1.2430.00007
ORF1ab/nsp31120A1120SGctTct11B.1.258.110.000396
ORF1ab/nsp31120A1120SGctTct11B.1.3440.008197
ORF1ab/nsp31120A1120SGctTct11B.1.3510.00003
ORF1ab/nsp31120A1120SGctTct11B.1.5170.000427
ORF1ab/nsp31120A1120SGctTct11B.1.5250.000113
ORF1ab/nsp31120A1120SGctTct11B.1.5370.02
ORF1ab/nsp31120A1120SGctTct11B.1.6100.003546
ORF1ab/nsp31120A1120SGctTct11B.1.6250.002353
ORF1ab/nsp31120A1120SGctTct11D.20.000075
ORF1ab/nsp31120A1120SGctTct11P.1.120.000484
ORF1ab/nsp31120A1120SGctTct11P.1.140.000048