CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 994 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3994A994VA1812VnonsyngCtgTt202120200.9995055699-5701

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3994A994VgCtgTt20202021All0.000386
ORF1ab/nsp3994A994VgCtgTt739739B.1.177.320.997301
ORF1ab/nsp3994A994VgCtgTt397397AY.40.000618
ORF1ab/nsp3994A994VgCtgTt231231B.1.1.70.000207
ORF1ab/nsp3994A994VgCtgTt4949B.1.617.20.000185
ORF1ab/nsp3994A994VgCtgTt4646AY.430.000204
ORF1ab/nsp3994A994VgCtgTt4242B.1.1770.000553
ORF1ab/nsp3994A994VgCtgTt3939AY.420.001569
ORF1ab/nsp3994A994VgCtgTt3434AY.1030.000211
ORF1ab/nsp3994A994VgCtgTt3333AY.290.000521
ORF1ab/nsp3994A994VgCtgTt2828B.10.000256
ORF1ab/nsp3994A994VgCtgTt2424AY.30.000239
ORF1ab/nsp3994A994VgCtgTt2323B.1.6210.002036
ORF1ab/nsp3994A994VgCtgTt2020AY.440.000122
ORF1ab/nsp3994A994VgCtgTt1919B.1.20.000167
ORF1ab/nsp3994A994VgCtgTt1515AY.470.000467
ORF1ab/nsp3994A994VgCtgTt1414AY.1170.001183
ORF1ab/nsp3994A994VgCtgTt1414AY.1210.001894
ORF1ab/nsp3994A994VgCtgTt1313B.1.10.000236
ORF1ab/nsp3994A994VgCtgTt1212AY.250.000072
ORF1ab/nsp3994A994VgCtgTt1111AY.1200.000409
ORF1ab/nsp3994A994VgCtgTt1010P.10.000158
ORF1ab/nsp3994A994VgCtgTt88B.1.1.5250.043716
ORF1ab/nsp3994A994VgCtgTt77AY.1190.000247
ORF1ab/nsp3994A994VgCtgTt66A.2.50.002994
ORF1ab/nsp3994A994VgCtgTt66AY.1020.000159
ORF1ab/nsp3994A994VgCtgTt56AY.390.000124
ORF1ab/nsp3994A994VgCtgTt66AY.4.20.00013
ORF1ab/nsp3994A994VgCtgTt66B.1.4270.000303
ORF1ab/nsp3994A994VgCtgTt66B.1.4290.000141
ORF1ab/nsp3994A994VgCtgTt66B.1.5260.000141
ORF1ab/nsp3994A994VgCtgTt66R.10.00054
ORF1ab/nsp3994A994VgCtgTt55B.1.1.2410.010352
ORF1ab/nsp3994A994VgCtgTt55B.1.1.5190.000199
ORF1ab/nsp3994A994VgCtgTt55B.1.177.560.003338
ORF1ab/nsp3994A994VgCtgTt55B.1.2430.000348
ORF1ab/nsp3994A994VgCtgTt44AY.260.000113
ORF1ab/nsp3994A994VgCtgTt44B.1.1600.000125
ORF1ab/nsp3994A994VgCtgTt44B.1.36.10.004561
ORF1ab/nsp3994A994VgCtgTt33AY.230.000209
ORF1ab/nsp3994A994VgCtgTt33AY.99.20.000276
ORF1ab/nsp3994A994VgCtgTt33B0.000383
ORF1ab/nsp3994A994VgCtgTt33B.1.3510.000089
ORF1ab/nsp3994A994VgCtgTt33B.1.3660.014634
ORF1ab/nsp3994A994VgCtgTt33B.1.6310.010101
ORF1ab/nsp3994A994VgCtgTt33P.1.170.000485
ORF1ab/nsp3994A994VgCtgTt22AY.160.000759
ORF1ab/nsp3994A994VgCtgTt22AY.330.000134
ORF1ab/nsp3994A994VgCtgTt22AY.610.00021
ORF1ab/nsp3994A994VgCtgTt22AY.700.000417
ORF1ab/nsp3994A994VgCtgTt22AY.98.10.000097
ORF1ab/nsp3994A994VgCtgTt22B.1.1.2140.000111
ORF1ab/nsp3994A994VgCtgTt22B.1.1.2690.002706
ORF1ab/nsp3994A994VgCtgTt22B.1.1.3110.000716
ORF1ab/nsp3994A994VgCtgTt22B.1.1.3180.000604
ORF1ab/nsp3994A994VgCtgTt22B.1.1110.00235
ORF1ab/nsp3994A994VgCtgTt22B.1.2340.000264
ORF1ab/nsp3994A994VgCtgTt22B.1.258.170.000208
ORF1ab/nsp3994A994VgCtgTt22B.1.4700.002809
ORF1ab/nsp3994A994VgCtgTt22B.1.6370.000146
ORF1ab/nsp3994A994VgCtgTt110.055556
ORF1ab/nsp3994A994VgCtgTt11A.20.000662
ORF1ab/nsp3994A994VgCtgTt11AY.1180.000063
ORF1ab/nsp3994A994VgCtgTt11AY.130.000161
ORF1ab/nsp3994A994VgCtgTt11AY.16.10.00047
ORF1ab/nsp3994A994VgCtgTt11AY.20.000356
ORF1ab/nsp3994A994VgCtgTt11AY.200.000039
ORF1ab/nsp3994A994VgCtgTt11AY.3.10.000085
ORF1ab/nsp3994A994VgCtgTt11AY.320.000532
ORF1ab/nsp3994A994VgCtgTt11AY.4.2.10.000149
ORF1ab/nsp3994A994VgCtgTt11AY.46.10.001027
ORF1ab/nsp3994A994VgCtgTt11AY.46.60.000072
ORF1ab/nsp3994A994VgCtgTt11AY.480.000465
ORF1ab/nsp3994A994VgCtgTt11AY.50.000021
ORF1ab/nsp3994A994VgCtgTt11AY.520.000814
ORF1ab/nsp3994A994VgCtgTt11AY.540.000095
ORF1ab/nsp3994A994VgCtgTt11AY.550.000917
ORF1ab/nsp3994A994VgCtgTt11AY.590.00053
ORF1ab/nsp3994A994VgCtgTt11AY.620.000436
ORF1ab/nsp3994A994VgCtgTt11AY.680.000274
ORF1ab/nsp3994A994VgCtgTt11AY.7.10.000113
ORF1ab/nsp3994A994VgCtgTt11AY.710.000475
ORF1ab/nsp3994A994VgCtgTt11AY.750.000056
ORF1ab/nsp3994A994VgCtgTt11AY.75.10.00018
ORF1ab/nsp3994A994VgCtgTt11AY.90.000068
ORF1ab/nsp3994A994VgCtgTt11AY.9.20.000037
ORF1ab/nsp3994A994VgCtgTt11AY.910.00073
ORF1ab/nsp3994A994VgCtgTt11AY.930.000273
ORF1ab/nsp3994A994VgCtgTt11AY.990.001049
ORF1ab/nsp3994A994VgCtgTt11B.1.1.100.001115
ORF1ab/nsp3994A994VgCtgTt11B.1.1.1570.000913
ORF1ab/nsp3994A994VgCtgTt11B.1.1.1590.004673
ORF1ab/nsp3994A994VgCtgTt11B.1.1.2770.000759
ORF1ab/nsp3994A994VgCtgTt11B.1.1.280.000311
ORF1ab/nsp3994A994VgCtgTt11B.1.1.2970.002237
ORF1ab/nsp3994A994VgCtgTt11B.1.1.4320.001266
ORF1ab/nsp3994A994VgCtgTt11B.1.1.4340.000349
ORF1ab/nsp3994A994VgCtgTt11B.1.110.30.000718
ORF1ab/nsp3994A994VgCtgTt11B.1.177.210.000076
ORF1ab/nsp3994A994VgCtgTt11B.1.177.50.001242
ORF1ab/nsp3994A994VgCtgTt11B.1.177.600.000218
ORF1ab/nsp3994A994VgCtgTt11B.1.177.70.000165
ORF1ab/nsp3994A994VgCtgTt11B.1.2210.000071
ORF1ab/nsp3994A994VgCtgTt11B.1.2400.000216
ORF1ab/nsp3994A994VgCtgTt11B.1.351.20.000303
ORF1ab/nsp3994A994VgCtgTt11B.1.36.290.000517
ORF1ab/nsp3994A994VgCtgTt11B.1.3620.001541
ORF1ab/nsp3994A994VgCtgTt11B.1.3690.000285
ORF1ab/nsp3994A994VgCtgTt11B.1.4340.052632
ORF1ab/nsp3994A994VgCtgTt11B.1.5250.000113
ORF1ab/nsp3994A994VgCtgTt11B.1.5610.000397
ORF1ab/nsp3994A994VgCtgTt11B.1.5770.000687
ORF1ab/nsp3994A994VgCtgTt11B.1.5820.000491
ORF1ab/nsp3994A994VgCtgTt11B.1.6280.000352
ORF1ab/nsp3994A994VgCtgTt11B.40.002208
ORF1ab/nsp3994A994VgCtgTt11B.400.000364
ORF1ab/nsp3994A994VgCtgTt11C.350.000774
ORF1ab/nsp3994A994VgCtgTt11C.370.000116
ORF1ab/nsp3994A994VgCtgTt11D.20.000075
ORF1ab/nsp3994A994VgCtgTt11N.90.005952
ORF1ab/nsp3994A994VgCtgTt11P.20.000187
ORF1ab/nsp3994A994VgCtgTt11Q.30.000145
ORF1ab/nsp3994A994VgCtgTt11Q.80.000165
ORF1ab/nsp3994A994VgCtgTt11V.10.022727