CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 975 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3975A975SA1793SnonsynGctTct54510.9444445642-5644

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3975A975SGctTct5154All0.00001
ORF1ab/nsp3975A975SGctTct99AY.440.000055
ORF1ab/nsp3975A975SGctTct88AY.40.000012
ORF1ab/nsp3975A975SGctTct67B.1.1.70.000005
ORF1ab/nsp3975A975SGctTct44B.1.1600.000125
ORF1ab/nsp3975A975SGctTct13P.10.000016
ORF1ab/nsp3975A975SGctTct22B.10.000018
ORF1ab/nsp3975A975SGctTct22B.1.20.000018
ORF1ab/nsp3975A975SGctTct22B.1.617.20.000008
ORF1ab/nsp3975A975SGctTct22D.20.00015
ORF1ab/nsp3975A975SGctTct11AY.1000.000046
ORF1ab/nsp3975A975SGctTct11AY.1030.000006
ORF1ab/nsp3975A975SGctTct11AY.430.000004
ORF1ab/nsp3975A975SGctTct11AY.450.000122
ORF1ab/nsp3975A975SGctTct11AY.460.000104
ORF1ab/nsp3975A975SGctTct11AY.690.000187
ORF1ab/nsp3975A975SGctTct11B.1.10.000018
ORF1ab/nsp3975A975SGctTct11B.1.1.500.000679
ORF1ab/nsp3975A975SGctTct11B.1.130.002375
ORF1ab/nsp3975A975SGctTct11B.1.1770.000013
ORF1ab/nsp3975A975SGctTct11B.1.258.170.000104
ORF1ab/nsp3975A975SGctTct11B.1.360.000146
ORF1ab/nsp3975A975SGctTct11B.1.5960.000087
ORF1ab/nsp3975A975SGctTct11B.1.6180.004032
ORF1ab/nsp3975A975SGctTct11C.370.000116