CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 968

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3968P968LP1786LnonsyncCtcTt11347113310.998595621-5623
ORF1ab/nsp3968P968LP1786LnonsynCCTTTA1134780.0007050325621-5623
ORF1ab/nsp3968P968LP1786LnonsynCCTTTG1134760.0005287745621-5623
ORF1ab/nsp3968P968LP1786LnonsyncCTcTG1134720.0001762585621-5623
ORF1ab/nsp3968P968SP1786SnonsynCctTct298429790.9983245621-5623
ORF1ab/nsp3968P968SP1786SnonsynCCtAGt298430.001005365621-5623
ORF1ab/nsp3968P968SP1786SnonsynCcTTcA298410.0003351215621-5623
ORF1ab/nsp3968P968SP1786SnonsynCcTTcG298410.0003351215621-5623
ORF1ab/nsp3968P968HP1786HnonsyncCtcAt18418415621-5623
ORF1ab/nsp3968P968PP1786PsynccTccC128950.7421885621-5623
ORF1ab/nsp3968P968PP1786PsynccTccG128180.1406255621-5623
ORF1ab/nsp3968P968PP1786PsynccTccA128150.1171885621-5623
ORF1ab/nsp3968P968TP1786TnonsynCctAct1091070.9816515621-5623
ORF1ab/nsp3968P968TP1786TnonsynCcTAcA10910.009174315621-5623
ORF1ab/nsp3968P968TP1786TnonsynCcTAcG10910.009174315621-5623
ORF1ab/nsp3968P968delP1786deldelCCT---252515621-5623
ORF1ab/nsp3968P968IP1786InonsynCCtATt25140.565621-5623
ORF1ab/nsp3968P968IP1786InonsynCCTATA25110.445621-5623
ORF1ab/nsp3968P968KP1786KnonsynCCTAAA17100.5882355621-5623
ORF1ab/nsp3968P968XP1786XnonsynCCTTAA1780.4705885621-5623
ORF1ab/nsp3968P968KP1786KnonsynCCTAAG1770.4117655621-5623
ORF1ab/nsp3968P968XP1786XnonsynCCTTAG1770.4117655621-5623
ORF1ab/nsp3968P968XP1786XnonsynCCTTGA1720.1176475621-5623
ORF1ab/nsp3968P968NP1786NnonsynCCtAAt141415621-5623
ORF1ab/nsp3968P968FP1786FnonsynCCtTTt141415621-5623
ORF1ab/nsp3968P968YP1786YnonsynCCtTAt121215621-5623
ORF1ab/nsp3968P968MP1786MnonsynCCTATG6615621-5623
ORF1ab/nsp3968P968RP1786RnonsynCCTAGA630.55621-5623
ORF1ab/nsp3968P968RP1786RnonsyncCtcGt620.3333335621-5623
ORF1ab/nsp3968P968RP1786RnonsynCCTAGG610.1666675621-5623
ORF1ab/nsp3968P968del1P1786del1delCct-ct530.65621-5623
ORF1ab/nsp3968P968del1P1786del1delccTcc-510.25621-5623
ORF1ab/nsp3968P968del1P1786del1delCCT-TC510.25621-5623
ORF1ab/nsp3968P968CP1786CnonsynCCtTGt2215621-5623
ORF1ab/nsp3968P968VP1786VnonsynCCtGTt210.55621-5623
ORF1ab/nsp3968P968VP1786VnonsynCCTGTG210.55621-5623
ORF1ab/nsp3968P968QP1786QnonsyncCTcAG1115621-5623
ORF1ab/nsp3968P968del2P1786del2delcCTc--1115621-5623
ORF1ab/nsp3968P968DP1786DnonsynCCtGAt1115621-5623
ORF1ab/nsp3968P968EP1786EnonsynCCTGAG1115621-5623
ORF1ab/nsp3968P968WP1786WnonsynCCTTGG1115621-5623

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3968P968LcCtcTt1133111347All0.002167
ORF1ab/nsp3968P968LCCTTTA811347All0.000002
ORF1ab/nsp3968P968LCCTTTG611347All0.000001
ORF1ab/nsp3968P968LcCTcTG211347All0
ORF1ab/nsp3968P968LcCtcTt45494549AD.20.996059
ORF1ab/nsp3968P968SCctTct29792984All0.00057
ORF1ab/nsp3968P968SCCtAGt32984All0.000001
ORF1ab/nsp3968P968SCcTTcA12984All0
ORF1ab/nsp3968P968SCcTTcG12984All0
ORF1ab/nsp3968P968SCctTct11371141B.1.1.70.001018
ORF1ab/nsp3968P968SCCtAGt31141B.1.1.70.000003
ORF1ab/nsp3968P968SCcTTcA11141B.1.1.70.000001
ORF1ab/nsp3968P968LcCtcTt10291040B.1.1.70.000921
ORF1ab/nsp3968P968LCCTTTA61040B.1.1.70.000005
ORF1ab/nsp3968P968LCCTTTG51040B.1.1.70.000004
ORF1ab/nsp3968P968LcCtcTt624624B.1.20.005495
ORF1ab/nsp3968P968LcCtcTt610610B.1.1600.019024
ORF1ab/nsp3968P968LcCtcTt570570AY.3.10.048597
ORF1ab/nsp3968P968LcCtcTt319319B.1.10.005787
ORF1ab/nsp3968P968LcCtcTt315315AY.40.00049
ORF1ab/nsp3968P968LcCtcTt273273AY.60.011228
ORF1ab/nsp3968P968SCctTct203203AY.200.00789
ORF1ab/nsp3968P968HcCtcAt184184All0.000035
ORF1ab/nsp3968P968LcCtcTt174174B.1.1.700.059345
ORF1ab/nsp3968P968SCctTct173173B.1.20.001523
ORF1ab/nsp3968P968SCctTct164164AY.40.000255
ORF1ab/nsp3968P968LcCtcTt159159AY.90.010748
ORF1ab/nsp3968P968LcCtcTt151151AY.470.004697
ORF1ab/nsp3968P968LcCtcTt148149AY.440.000901
ORF1ab/nsp3968P968LcCTcTG1149AY.440.000006
ORF1ab/nsp3968P968LcCtcTt148148AY.30.001472
ORF1ab/nsp3968P968LcCtcTt141141B.1.617.20.000531
ORF1ab/nsp3968P968PccTccC95128All0.000018
ORF1ab/nsp3968P968PccTccG18128All0.000003
ORF1ab/nsp3968P968PccTccA15128All0.000003
ORF1ab/nsp3968P968LcCtcTt127127AY.430.000563
ORF1ab/nsp3968P968SCctTct124124B.1.617.20.000467
ORF1ab/nsp3968P968LcCtcTt111111AY.1030.000689
ORF1ab/nsp3968P968TCctAct107109All0.00002
ORF1ab/nsp3968P968TCcTAcA1109All0
ORF1ab/nsp3968P968TCcTAcG1109All0
ORF1ab/nsp3968P968LcCtcTt104104B.10.000953
ORF1ab/nsp3968P968LcCtcTt9999AY.50.002044
ORF1ab/nsp3968P968LcCtcTt8989P.1.70.028416
ORF1ab/nsp3968P968HcCtcAt8787AY.40.000135
ORF1ab/nsp3968P968LcCtcTt8484B.1.2580.00559
ORF1ab/nsp3968P968SCctTct8181AY.250.000487
ORF1ab/nsp3968P968TCctAct7879B.1.1.70.00007
ORF1ab/nsp3968P968TCcTAcA179B.1.1.70.000001
ORF1ab/nsp3968P968SCctTct7373B.1.1.150.986486
ORF1ab/nsp3968P968SCctTct7272AY.440.000438
ORF1ab/nsp3968P968LcCtcTt6970P.10.001087
ORF1ab/nsp3968P968LCCTTTA170P.10.000016
ORF1ab/nsp3968P968LcCtcTt6364AY.250.000379
ORF1ab/nsp3968P968LCCTTTA164AY.250.000006
ORF1ab/nsp3968P968LcCtcTt6464AY.260.001812
ORF1ab/nsp3968P968PccTccC6364AY.40.000098
ORF1ab/nsp3968P968PccTccG164AY.40.000002
ORF1ab/nsp3968P968LcCtcTt5858AY.390.001433
ORF1ab/nsp3968P968LcCtcTt5656B.1.177.730.03171
ORF1ab/nsp3968P968SCctTct5555AY.260.001557
ORF1ab/nsp3968P968LcCtcTt5252B.1.4290.001224
ORF1ab/nsp3968P968SCctTct4747AY.650.025053
ORF1ab/nsp3968P968LcCtcTt4343B.1.1770.000566
ORF1ab/nsp3968P968LcCtcTt4242AY.200.001632
ORF1ab/nsp3968P968LcCtcTt4242B.1.1.2220.008568
ORF1ab/nsp3968P968LcCtcTt4242B.1.2210.002983
ORF1ab/nsp3968P968SCctTct4141AY.1170.003465
ORF1ab/nsp3968P968LcCtcTt4141B.1.3510.001219
ORF1ab/nsp3968P968LcCtcTt4040R.10.0036
ORF1ab/nsp3968P968SCctTct3838AY.1030.000236
ORF1ab/nsp3968P968LcCtcTt3838AY.290.000599
ORF1ab/nsp3968P968SCctTct3737AY.4.20.000802
ORF1ab/nsp3968P968LcCtcTt3131B.1.4270.001565
ORF1ab/nsp3968P968SCctTct3131B.1.4290.000729
ORF1ab/nsp3968P968LcCtcTt3030AY.1060.010047
ORF1ab/nsp3968P968SCctTct3030B.10.000275
ORF1ab/nsp3968P968LcCtcTt2929AY.1000.001334
ORF1ab/nsp3968P968SCctTct2929AY.930.007919
ORF1ab/nsp3968P968SCctTct2828AY.30.000278
ORF1ab/nsp3968P968LcCtcTt2727AY.940.011952
ORF1ab/nsp3968P968LcCtcTt2727B.1.4040.035156
ORF1ab/nsp3968P968LcCtcTt2626B.1.5260.000611
ORF1ab/nsp3968P968delCCT---2525All0.000005
ORF1ab/nsp3968P968ICCtATt1425All0.000003
ORF1ab/nsp3968P968ICCTATA1125All0.000002
ORF1ab/nsp3968P968SCctTct2424AY.50.000496
ORF1ab/nsp3968P968SCctTct2323B.1.160.180.167883
ORF1ab/nsp3968P968SCctTct2323P.10.000362
ORF1ab/nsp3968P968LcCtcTt2222AD.2.11
ORF1ab/nsp3968P968LcCtcTt2121B.1.1.1010.21
ORF1ab/nsp3968P968ICCtATt1120B.1.1.70.00001
ORF1ab/nsp3968P968ICCTATA920B.1.1.70.000008
ORF1ab/nsp3968P968SCctTct2020B.1.2210.001421
ORF1ab/nsp3968P968SCctTct1919B.1.1600.000593
ORF1ab/nsp3968P968SCctTct1919B.1.177.810.003597
ORF1ab/nsp3968P968LcCtcTt1818AY.4.20.00039
ORF1ab/nsp3968P968SCctTct1818AY.430.00008
ORF1ab/nsp3968P968KCCTAAA1017All0.000002
ORF1ab/nsp3968P968XCCTTAA817All0.000002
ORF1ab/nsp3968P968KCCTAAG717All0.000001
ORF1ab/nsp3968P968XCCTTAG717All0.000001
ORF1ab/nsp3968P968XCCTTGA217All0
ORF1ab/nsp3968P968LcCtcTt1717AY.70.003332
ORF1ab/nsp3968P968LcCtcTt1717C.36.30.009643
ORF1ab/nsp3968P968LcCtcTt1616AY.420.000644
ORF1ab/nsp3968P968SCctTct1616B.1.3510.000476
ORF1ab/nsp3968P968SCctTct1616B.1.4270.000808
ORF1ab/nsp3968P968LcCtcTt1416B.1.5250.001584
ORF1ab/nsp3968P968LcCTcTG116B.1.5250.000113
ORF1ab/nsp3968P968LCCTTTG116B.1.5250.000113
ORF1ab/nsp3968P968LcCtcTt1515AY.360.002223
ORF1ab/nsp3968P968SCctTct1515B.1.1.4330.021368
ORF1ab/nsp3968P968FCCtTTt1414All0.000003
ORF1ab/nsp3968P968NCCtAAt1414All0.000003
ORF1ab/nsp3968P968SCctTct1414B.1.1.2140.000776
ORF1ab/nsp3968P968KCCTAAA814B.1.1.70.000007
ORF1ab/nsp3968P968XCCTTAA614B.1.1.70.000005
ORF1ab/nsp3968P968XCCTTAG614B.1.1.70.000005
ORF1ab/nsp3968P968KCCTAAG614B.1.1.70.000005
ORF1ab/nsp3968P968XCCTTGA214B.1.1.70.000002
ORF1ab/nsp3968P968SCctTct1414B.1.214.20.008393
ORF1ab/nsp3968P968SCctTct1313B.1.1.5190.000516
ORF1ab/nsp3968P968SCctTct1313B.1.177.830.019259
ORF1ab/nsp3968P968LcCtcTt1313B.1.3990.025145
ORF1ab/nsp3968P968LcCtcTt1313B.1.5770.008935
ORF1ab/nsp3968P968LcCtcTt1313C.370.001509
ORF1ab/nsp3968P968YCCtTAt1212All0.000002
ORF1ab/nsp3968P968SCctTct1212AY.1020.000318
ORF1ab/nsp3968P968LcCtcTt1212AY.1170.001014
ORF1ab/nsp3968P968SCctTct1212B.1.10.000218
ORF1ab/nsp3968P968delCCT---1212B.1.1.70.000011
ORF1ab/nsp3968P968HcCtcAt1212B.1.1.70.000011
ORF1ab/nsp3968P968LcCtcTt1212B.1.258.170.001248
ORF1ab/nsp3968P968SCctTct1212B.1.4080.04428
ORF1ab/nsp3968P968NCCtAAt1111B.1.1.70.00001
ORF1ab/nsp3968P968LcCtcTt1111B.1.177.210.000841
ORF1ab/nsp3968P968LcCtcTt1111B.1.3110.00302
ORF1ab/nsp3968P968PccTccA610B.1.1.70.000005
ORF1ab/nsp3968P968PccTccG210B.1.1.70.000002
ORF1ab/nsp3968P968PccTccC210B.1.1.70.000002
ORF1ab/nsp3968P968SCctTct1010B.1.1120.051813
ORF1ab/nsp3968P968SCctTct1010B.1.1770.000132
ORF1ab/nsp3968P968LcCtcTt1010B.1.177.810.001893
ORF1ab/nsp3968P968LcCtcTt1010B.1.6210.000885
ORF1ab/nsp3968P968SCctTct99AY.1200.000335
ORF1ab/nsp3968P968LcCtcTt99AY.120.10.002889
ORF1ab/nsp3968P968SCctTct99AY.610.000943
ORF1ab/nsp3968P968LcCtcTt99B.1.1.3180.002716
ORF1ab/nsp3968P968SCctTct99B.1.177.320.012146
ORF1ab/nsp3968P968LcCtcTt99B.1.2360.01848
ORF1ab/nsp3968P968SCctTct99B.1.258.170.000936
ORF1ab/nsp3968P968SCctTct99B.1.5390.157895
ORF1ab/nsp3968P968LcCtcTt88AY.1180.000501
ORF1ab/nsp3968P968LcCtcTt88AY.1200.000297
ORF1ab/nsp3968P968SCctTct88AY.390.000198
ORF1ab/nsp3968P968PccTccC58AY.440.00003
ORF1ab/nsp3968P968PccTccA28AY.440.000012
ORF1ab/nsp3968P968PccTccG18AY.440.000006
ORF1ab/nsp3968P968LcCtcTt88AY.450.000973
ORF1ab/nsp3968P968LcCtcTt88AY.9.20.000294
ORF1ab/nsp3968P968SCctTct88B.1.1.3160.007401
ORF1ab/nsp3968P968YCCtTAt88B.1.1.70.000007
ORF1ab/nsp3968P968FCCtTTt88B.1.1.70.000007
ORF1ab/nsp3968P968LcCtcTt88B.1.177.40.001688
ORF1ab/nsp3968P968HcCtcAt88B.1.617.20.00003
ORF1ab/nsp3968P968SCctTct88B.1.6370.000585
ORF1ab/nsp3968P968LcCtcTt88C.360.007286
ORF1ab/nsp3968P968LcCtcTt77AY.1020.000186
ORF1ab/nsp3968P968LcCtcTt77AY.1190.000247
ORF1ab/nsp3968P968SCctTct77AY.1190.000247
ORF1ab/nsp3968P968SCctTct77AY.39.10.000277
ORF1ab/nsp3968P968SCctTct77AY.540.000667
ORF1ab/nsp3968P968LcCtcTt77B.1.1.3150.059322
ORF1ab/nsp3968P968LcCtcTt77B.1.2430.000487
ORF1ab/nsp3968P968LcCtcTt77B.1.4160.008883
ORF1ab/nsp3968P968SCctTct77B.1.5260.000165
ORF1ab/nsp3968P968MCCTATG66All0.000001
ORF1ab/nsp3968P968RCCTAGA36All0.000001
ORF1ab/nsp3968P968RcCtcGt26All0
ORF1ab/nsp3968P968RCCTAGG16All0
ORF1ab/nsp3968P968LcCtcTt66AY.330.000401
ORF1ab/nsp3968P968PccTccC46AY.430.000018
ORF1ab/nsp3968P968PccTccG16AY.430.000004
ORF1ab/nsp3968P968PccTccA16AY.430.000004
ORF1ab/nsp3968P968LcCtcTt66AY.710.00285
ORF1ab/nsp3968P968LcCtcTt66AY.9.10.000502
ORF1ab/nsp3968P968SCctTct66B.1.1.1590.028037
ORF1ab/nsp3968P968LcCtcTt66B.1.1620.030151
ORF1ab/nsp3968P968LcCtcTt66B.1.351.20.001815
ORF1ab/nsp3968P968SCctTct66B.1.360.000875
ORF1ab/nsp3968P968LcCtcTt66B.1.5960.000523
ORF1ab/nsp3968P968SCctTct66B.1.6210.000531
ORF1ab/nsp3968P968LcCtcTt66N.60.042553
ORF1ab/nsp3968P968del1Cct-ct35All0.000001
ORF1ab/nsp3968P968del1ccTcc-15All0
ORF1ab/nsp3968P968del1CCT-TC15All0
ORF1ab/nsp3968P968LcCtcTt55AY.1210.000677
ORF1ab/nsp3968P968SCctTct55AY.330.000334
ORF1ab/nsp3968P968LcCtcTt55AY.340.000485
ORF1ab/nsp3968P968HcCtcAt55AY.440.00003
ORF1ab/nsp3968P968SCctTct55AY.46.40.000823
ORF1ab/nsp3968P968MCCTATG55B.1.1.70.000004
ORF1ab/nsp3968P968LcCtcTt55B.1.1450.263158
ORF1ab/nsp3968P968LcCtcTt55B.1.160.80.006443
ORF1ab/nsp3968P968LcCtcTt55B.1.2340.00066
ORF1ab/nsp3968P968PccTccC35B.1.617.20.000011
ORF1ab/nsp3968P968PccTccG25B.1.617.20.000008
ORF1ab/nsp3968P968LcCtcTt55P.1.140.000239
ORF1ab/nsp3968P968LcCtcTt44AY.230.000279
ORF1ab/nsp3968P968PccTccC44AY.250.000024
ORF1ab/nsp3968P968LcCtcTt44AY.270.000259
ORF1ab/nsp3968P968HcCtcAt44AY.270.000259
ORF1ab/nsp3968P968LcCtcTt44AY.39.10.000158
ORF1ab/nsp3968P968SCctTct44AY.450.000487
ORF1ab/nsp3968P968LcCtcTt44AY.46.60.000289
ORF1ab/nsp3968P968SCctTct44AY.470.000124
ORF1ab/nsp3968P968LcCtcTt44AY.500.003197
ORF1ab/nsp3968P968LcCtcTt44AY.570.002625
ORF1ab/nsp3968P968LcCtcTt44AY.740.000463
ORF1ab/nsp3968P968SCctTct44AY.90.00027
ORF1ab/nsp3968P968LcCtcTt44AY.980.000316
ORF1ab/nsp3968P968HcCtcAt44B.10.000037
ORF1ab/nsp3968P968LcCtcTt44B.1.1.3890.024242
ORF1ab/nsp3968P968LcCtcTt44B.1.1.3970.009009
ORF1ab/nsp3968P968SCctTct44B.1.1.630.001543
ORF1ab/nsp3968P968RCCTAGA34B.1.1.70.000003
ORF1ab/nsp3968P968RCCTAGG14B.1.1.70.000001
ORF1ab/nsp3968P968LcCtcTt44B.1.177.60.003906
ORF1ab/nsp3968P968LcCtcTt44B.1.177.860.000734
ORF1ab/nsp3968P968SCctTct44B.1.36.290.002069
ORF1ab/nsp3968P968SCctTct44B.1.5960.000349
ORF1ab/nsp3968P968SCctTct44C.140.017316
ORF1ab/nsp3968P968LcCtcTt44Q.10.000505
ORF1ab/nsp3968P968PccTccC33A.2.50.001497
ORF1ab/nsp3968P968SCctTct33A.2.50.001497
ORF1ab/nsp3968P968HcCtcAt33A.210.00831
ORF1ab/nsp3968P968SCctTct33AY.1000.000138
ORF1ab/nsp3968P968HcCtcAt33AY.1000.000138
ORF1ab/nsp3968P968SCctTct33AY.1090.002219
ORF1ab/nsp3968P968SCctTct33AY.1100.000338
ORF1ab/nsp3968P968HcCtcAt33AY.290.000047
ORF1ab/nsp3968P968SCctTct33AY.290.000047
ORF1ab/nsp3968P968HcCtcAt33AY.30.00003
ORF1ab/nsp3968P968SCctTct33AY.340.000291
ORF1ab/nsp3968P968HcCtcAt33AY.4.2.10.000447
ORF1ab/nsp3968P968SCctTct33AY.420.000121
ORF1ab/nsp3968P968TCctAct33AY.430.000013
ORF1ab/nsp3968P968HcCtcAt33AY.430.000013
ORF1ab/nsp3968P968LcCtcTt33AY.460.000312
ORF1ab/nsp3968P968LcCtcTt33AY.46.40.000494
ORF1ab/nsp3968P968SCctTct33AY.60.000123
ORF1ab/nsp3968P968LcCtcTt33AY.610.000314
ORF1ab/nsp3968P968LcCtcTt33AY.75.10.000541
ORF1ab/nsp3968P968SCctTct33AY.99.20.000276
ORF1ab/nsp3968P968LcCtcTt33AY.99.20.000276
ORF1ab/nsp3968P968HcCtcAt33B.1.10.000054
ORF1ab/nsp3968P968SCctTct33B.1.1.250.001706
ORF1ab/nsp3968P968SCctTct33B.1.1.280.000934
ORF1ab/nsp3968P968LcCtcTt33B.1.1.3170.001235
ORF1ab/nsp3968P968LcCtcTt33B.1.1.3650.01676
ORF1ab/nsp3968P968SCctTct33B.1.1.4200.003018
ORF1ab/nsp3968P968HcCtcAt33B.1.1.5190.000119
ORF1ab/nsp3968P968SCctTct33B.1.1280.001906
ORF1ab/nsp3968P968HcCtcAt33B.1.1600.000094
ORF1ab/nsp3968P968LcCtcTt33B.1.177.440.001557
ORF1ab/nsp3968P968SCctTct33B.1.177.860.00055
ORF1ab/nsp3968P968LcCtcTt33B.1.2400.000647
ORF1ab/nsp3968P968SCctTct33B.1.2580.0002
ORF1ab/nsp3968P968LcCtcTt33B.1.2980.006342
ORF1ab/nsp3968P968SCctTct33B.1.351.20.000908
ORF1ab/nsp3968P968SCctTct33B.1.36.80.003
ORF1ab/nsp3968P968LcCtcTt33B.1.466.20.001174
ORF1ab/nsp3968P968HcCtcAt33B.1.466.20.001174
ORF1ab/nsp3968P968HcCtcAt33B.1.5260.000071
ORF1ab/nsp3968P968LcCtcTt33B.1.5610.001191
ORF1ab/nsp3968P968LcCtcTt33B.1.5640.001278
ORF1ab/nsp3968P968SCctTct33B.1.5770.002062
ORF1ab/nsp3968P968LcCtcTt33B.1.617.10.000387
ORF1ab/nsp3968P968LcCtcTt33B.310.011194
ORF1ab/nsp3968P968HcCtcAt33N.50.0053
ORF1ab/nsp3968P968LcCtcTt33P.1.40.00293
ORF1ab/nsp3968P968LcCtcTt22A.10.000564
ORF1ab/nsp3968P968LcCtcTt22A.2.50.000998
ORF1ab/nsp3968P968LcCtcTt22A.2.5.10.009615
ORF1ab/nsp3968P968CCCtTGt22All0
ORF1ab/nsp3968P968VCCtGTt12All0
ORF1ab/nsp3968P968VCCTGTG12All0
ORF1ab/nsp3968P968TCctAct22AY.1030.000012
ORF1ab/nsp3968P968SCctTct22AY.1060.00067
ORF1ab/nsp3968P968LcCtcTt22AY.1110.000366
ORF1ab/nsp3968P968LcCtcTt22AY.1130.000285
ORF1ab/nsp3968P968SCctTct22AY.1140.000462
ORF1ab/nsp3968P968SCctTct22AY.1180.000125
ORF1ab/nsp3968P968TCctAct22AY.1190.000071
ORF1ab/nsp3968P968LcCtcTt22AY.160.000759
ORF1ab/nsp3968P968SCctTct22AY.16.10.00094
ORF1ab/nsp3968P968ICCtATt12AY.250.000006
ORF1ab/nsp3968P968ICCTATA12AY.250.000006
ORF1ab/nsp3968P968SCctTct22AY.3.10.000171
ORF1ab/nsp3968P968PccTccC22AY.39.10.000079
ORF1ab/nsp3968P968TCctAct22AY.40.000003
ORF1ab/nsp3968P968HcCtcAt22AY.4.20.000043
ORF1ab/nsp3968P968LcCtcTt22AY.4.50.000215
ORF1ab/nsp3968P968LcCtcTt22AY.5.40.000553
ORF1ab/nsp3968P968LcCtcTt22AY.540.000191
ORF1ab/nsp3968P968LcCtcTt22AY.590.001059
ORF1ab/nsp3968P968SCctTct22AY.600.001876
ORF1ab/nsp3968P968LcCtcTt22AY.650.001066
ORF1ab/nsp3968P968LcCtcTt22AY.7.10.000225
ORF1ab/nsp3968P968SCctTct22AY.710.00095
ORF1ab/nsp3968P968SCctTct22AY.740.000231
ORF1ab/nsp3968P968LcCtcTt22AY.750.000112
ORF1ab/nsp3968P968SCctTct22AY.9.10.000167
ORF1ab/nsp3968P968SCctTct22AY.920.000575
ORF1ab/nsp3968P968SCctTct22AY.980.000158
ORF1ab/nsp3968P968SCctTct22B0.000256
ORF1ab/nsp3968P968PccTccG22B.1.10.000036
ORF1ab/nsp3968P968PccTccC22B.1.1.1700.002494
ORF1ab/nsp3968P968SCctTct22B.1.1.2160.001781
ORF1ab/nsp3968P968LcCtcTt22B.1.1.2360.013793
ORF1ab/nsp3968P968TCctAct22B.1.1.2530.005013
ORF1ab/nsp3968P968LcCtcTt22B.1.1.2840.000215
ORF1ab/nsp3968P968SCctTct22B.1.1.2940.002532
ORF1ab/nsp3968P968LcCtcTt22B.1.1.3060.000877
ORF1ab/nsp3968P968SCctTct22B.1.1.390.001019
ORF1ab/nsp3968P968CCCtTGt22B.1.1.70.000002
ORF1ab/nsp3968P968VCCtGTt12B.1.1.70.000001
ORF1ab/nsp3968P968VCCTGTG12B.1.1.70.000001
ORF1ab/nsp3968P968SCctTct22B.1.110.30.001437
ORF1ab/nsp3968P968LcCtcTt22B.1.1260.002551
ORF1ab/nsp3968P968LcCtcTt22B.1.1570.00597
ORF1ab/nsp3968P968FCCtTTt22B.1.1600.000062
ORF1ab/nsp3968P968PccTccG12B.1.1770.000013
ORF1ab/nsp3968P968PccTccA12B.1.1770.000013
ORF1ab/nsp3968P968SCctTct22B.1.177.750.002081
ORF1ab/nsp3968P968LcCtcTt22B.1.177.80.001505
ORF1ab/nsp3968P968LcCtcTt22B.1.177.820.000955
ORF1ab/nsp3968P968TCctAct22B.1.177.860.000367
ORF1ab/nsp3968P968HcCtcAt22B.1.20.000018
ORF1ab/nsp3968P968TCctAct22B.1.20.000018
ORF1ab/nsp3968P968HcCtcAt22B.1.2210.000142
ORF1ab/nsp3968P968LcCtcTt22B.1.258.40.006897
ORF1ab/nsp3968P968SCctTct22B.1.3050.004301
ORF1ab/nsp3968P968LcCtcTt22B.1.3140.015038
ORF1ab/nsp3968P968LcCtcTt22B.1.3320.006993
ORF1ab/nsp3968P968LcCtcTt22B.1.351.10.076923
ORF1ab/nsp3968P968LcCtcTt22B.1.351.30.001753
ORF1ab/nsp3968P968LcCtcTt22B.1.360.000292
ORF1ab/nsp3968P968delCCT---22B.1.360.000292
ORF1ab/nsp3968P968LcCtcTt22B.1.36.10.002281
ORF1ab/nsp3968P968TCctAct22B.1.36.290.001035
ORF1ab/nsp3968P968SCctTct22B.1.3610.002577
ORF1ab/nsp3968P968LcCtcTt22B.1.3690.00057
ORF1ab/nsp3968P968LcCtcTt22B.1.3960.001411
ORF1ab/nsp3968P968LcCtcTt22B.1.5170.000854
ORF1ab/nsp3968P968SCcTTcG12B.1.5250.000113
ORF1ab/nsp3968P968TCcTAcG12B.1.5250.000113
ORF1ab/nsp3968P968SCctTct12B.1.5250.000113
ORF1ab/nsp3968P968TCctAct12B.1.5250.000113
ORF1ab/nsp3968P968LcCtcTt22B.1.5440.012048
ORF1ab/nsp3968P968LcCtcTt22B.1.5510.002581
ORF1ab/nsp3968P968LcCtcTt22B.1.5760.001813
ORF1ab/nsp3968P968SCctTct22B.1.617.10.000258
ORF1ab/nsp3968P968SCctTct22B.1.619.10.001283
ORF1ab/nsp3968P968LcCtcTt22B.1.88.10.009615
ORF1ab/nsp3968P968LcCtcTt22B.1.9.50.011364
ORF1ab/nsp3968P968HcCtcAt22C.370.000232
ORF1ab/nsp3968P968SCctTct22C.370.000232
ORF1ab/nsp3968P968TCctAct22D.20.00015
ORF1ab/nsp3968P968LcCtcTt22D.20.00015
ORF1ab/nsp3968P968SCctTct22N.50.003534
ORF1ab/nsp3968P968ICCtATt12P.10.000016
ORF1ab/nsp3968P968ICCTATA12P.10.000016
ORF1ab/nsp3968P968LcCtcTt22P.1.160.000748
ORF1ab/nsp3968P968SCctTct11A0.000387
ORF1ab/nsp3968P968LcCtcTt11A0.000387
ORF1ab/nsp3968P968HcCtcAt11A0.000387
ORF1ab/nsp3968P968LcCtcTt11A.20.000662
ORF1ab/nsp3968P968SCctTct11A.20.000662
ORF1ab/nsp3968P968PccTccA11A.20.000662
ORF1ab/nsp3968P968delCCT---11A.2.20.001689
ORF1ab/nsp3968P968LcCtcTt11A.23.10.000704
ORF1ab/nsp3968P968SCctTct11A.280.002646
ORF1ab/nsp3968P968LcCtcTt11AB.10.008197
ORF1ab/nsp3968P968LcCtcTt11AD.10.004115
ORF1ab/nsp3968P968FCCtTTt11AD.20.000219
ORF1ab/nsp3968P968SCctTct11AE.80.000489
ORF1ab/nsp3968P968del2cCTc--11All0
ORF1ab/nsp3968P968WCCTTGG11All0
ORF1ab/nsp3968P968QcCTcAG11All0
ORF1ab/nsp3968P968ECCTGAG11All0
ORF1ab/nsp3968P968DCCtGAt11All0
ORF1ab/nsp3968P968LcCtcTt11AP.10.001502
ORF1ab/nsp3968P968SCctTct11AY.1010.00049
ORF1ab/nsp3968P968LcCtcTt11AY.1010.00049
ORF1ab/nsp3968P968PccTccG11AY.1020.000027
ORF1ab/nsp3968P968PccTccC11AY.1030.000006
ORF1ab/nsp3968P968LcCtcTt11AY.1050.000643
ORF1ab/nsp3968P968LcCtcTt11AY.1070.000466
ORF1ab/nsp3968P968LcCtcTt11AY.1080.001103
ORF1ab/nsp3968P968LcCtcTt11AY.1140.000231
ORF1ab/nsp3968P968SCctTct11AY.1160.000287
ORF1ab/nsp3968P968LcCtcTt11AY.120.2.10.000498
ORF1ab/nsp3968P968LcCtcTt11AY.130.000161
ORF1ab/nsp3968P968SCctTct11AY.140.000088
ORF1ab/nsp3968P968LcCtcTt11AY.140.000088
ORF1ab/nsp3968P968SCctTct11AY.150.002222
ORF1ab/nsp3968P968LcCtcTt11AY.16.10.00047
ORF1ab/nsp3968P968PccTccG11AY.200.000039
ORF1ab/nsp3968P968HcCtcAt11AY.200.000039
ORF1ab/nsp3968P968LcCtcTt11AY.210.001898
ORF1ab/nsp3968P968SCctTct11AY.230.00007
ORF1ab/nsp3968P968TCctAct11AY.230.00007
ORF1ab/nsp3968P968LcCtcTt11AY.240.000431
ORF1ab/nsp3968P968FCCtTTt11AY.250.000006
ORF1ab/nsp3968P968HcCtcAt11AY.250.000006
ORF1ab/nsp3968P968KCCTAAA11AY.250.000006
ORF1ab/nsp3968P968NCCtAAt11AY.250.000006
ORF1ab/nsp3968P968YCCtTAt11AY.250.000006
ORF1ab/nsp3968P968XCCTTAA11AY.250.000006
ORF1ab/nsp3968P968PccTccC11AY.260.000028
ORF1ab/nsp3968P968SCctTct11AY.270.000065
ORF1ab/nsp3968P968LcCtcTt11AY.29.10.000221
ORF1ab/nsp3968P968PccTccG11AY.30.00001
ORF1ab/nsp3968P968LcCtcTt11AY.300.000396
ORF1ab/nsp3968P968LcCtcTt11AY.320.000532
ORF1ab/nsp3968P968PccTccC11AY.340.000097
ORF1ab/nsp3968P968SCctTct11AY.34.10.00051
ORF1ab/nsp3968P968delCCT---11AY.350.000233
ORF1ab/nsp3968P968LcCtcTt11AY.350.000233
ORF1ab/nsp3968P968SCctTct11AY.360.000148
ORF1ab/nsp3968P968TCctAct11AY.360.000148
ORF1ab/nsp3968P968TCctAct11AY.390.000025
ORF1ab/nsp3968P968LcCtcTt11AY.4.2.10.000149
ORF1ab/nsp3968P968SCctTct11AY.4.2.10.000149
ORF1ab/nsp3968P968LcCtcTt11AY.4.40.000409
ORF1ab/nsp3968P968HcCtcAt11AY.450.000122
ORF1ab/nsp3968P968SCctTct11AY.460.000104
ORF1ab/nsp3968P968delCCT---11AY.460.000104
ORF1ab/nsp3968P968LcCtcTt11AY.46.10.001027
ORF1ab/nsp3968P968SCctTct11AY.46.50.000198
ORF1ab/nsp3968P968LcCtcTt11AY.46.50.000198
ORF1ab/nsp3968P968HcCtcAt11AY.470.000031
ORF1ab/nsp3968P968del1CCT-TC11AY.480.000465
ORF1ab/nsp3968P968SCctTct11AY.480.000465
ORF1ab/nsp3968P968TCctAct11AY.5.40.000277
ORF1ab/nsp3968P968SCctTct11AY.530.000288
ORF1ab/nsp3968P968LcCtcTt11AY.580.000907
ORF1ab/nsp3968P968HcCtcAt11AY.60.000041
ORF1ab/nsp3968P968SCctTct11AY.620.000436
ORF1ab/nsp3968P968LcCtcTt11AY.690.000187
ORF1ab/nsp3968P968PccTccG11AY.70.000196
ORF1ab/nsp3968P968SCctTct11AY.700.000209
ORF1ab/nsp3968P968delCCT---11AY.710.000475
ORF1ab/nsp3968P968HcCtcAt11AY.75.10.00018
ORF1ab/nsp3968P968delCCT---11AY.75.10.00018
ORF1ab/nsp3968P968SCctTct11AY.770.001127
ORF1ab/nsp3968P968SCctTct11AY.780.001541
ORF1ab/nsp3968P968SCctTct11AY.790.001211
ORF1ab/nsp3968P968LcCtcTt11AY.840.000437
ORF1ab/nsp3968P968SCctTct11AY.860.00083
ORF1ab/nsp3968P968SCctTct11AY.880.000884
ORF1ab/nsp3968P968PccTccA11AY.9.10.000084
ORF1ab/nsp3968P968SCctTct11AY.9.20.000037
ORF1ab/nsp3968P968LcCtcTt11AY.910.00073
ORF1ab/nsp3968P968SCctTct11AY.98.10.000048
ORF1ab/nsp3968P968LcCtcTt11AY.98.10.000048
ORF1ab/nsp3968P968LcCtcTt11AY.99.10.001553
ORF1ab/nsp3968P968LcCtcTt11B0.000128
ORF1ab/nsp3968P968HcCtcAt11B0.000128
ORF1ab/nsp3968P968PccTccC11B0.000128
ORF1ab/nsp3968P968TCctAct11B.10.000009
ORF1ab/nsp3968P968YCCtTAt11B.10.000009
ORF1ab/nsp3968P968RcCtcGt11B.1.10.000018
ORF1ab/nsp3968P968TCctAct11B.1.10.000018
ORF1ab/nsp3968P968SCctTct11B.1.1.10.000327
ORF1ab/nsp3968P968delCCT---11B.1.1.1420.017544
ORF1ab/nsp3968P968LcCtcTt11B.1.1.1590.004673
ORF1ab/nsp3968P968LcCtcTt11B.1.1.1610.003534
ORF1ab/nsp3968P968LcCtcTt11B.1.1.1760.000439
ORF1ab/nsp3968P968LcCtcTt11B.1.1.1980.001468
ORF1ab/nsp3968P968SCctTct11B.1.1.2070.001182
ORF1ab/nsp3968P968LcCtcTt11B.1.1.2430.004082
ORF1ab/nsp3968P968PccTccC11B.1.1.250.000569
ORF1ab/nsp3968P968LcCtcTt11B.1.1.250.000569
ORF1ab/nsp3968P968LcCtcTt11B.1.1.2530.002506
ORF1ab/nsp3968P968LcCtcTt11B.1.1.2650.003155
ORF1ab/nsp3968P968SCctTct11B.1.1.270.00565
ORF1ab/nsp3968P968LcCtcTt11B.1.1.3110.000358
ORF1ab/nsp3968P968delCCT---11B.1.1.3150.008475
ORF1ab/nsp3968P968SCctTct11B.1.1.3260.001761
ORF1ab/nsp3968P968RcCtcGt11B.1.1.3260.001761
ORF1ab/nsp3968P968SCctTct11B.1.1.330.000421
ORF1ab/nsp3968P968SCctTct11B.1.1.3430.020833
ORF1ab/nsp3968P968LcCtcTt11B.1.1.370.000193
ORF1ab/nsp3968P968SCctTct11B.1.1.370.000193
ORF1ab/nsp3968P968LcCtcTt11B.1.1.3750.011905
ORF1ab/nsp3968P968LcCtcTt11B.1.1.390.00051
ORF1ab/nsp3968P968SCctTct11B.1.1.4090.002833
ORF1ab/nsp3968P968SCctTct11B.1.1.4160.000905
ORF1ab/nsp3968P968SCctTct11B.1.1.4320.001266
ORF1ab/nsp3968P968SCctTct11B.1.1.4340.000349
ORF1ab/nsp3968P968LcCtcTt11B.1.1.5190.00004
ORF1ab/nsp3968P968WCCTTGG11B.1.1.70.000001
ORF1ab/nsp3968P968DCCtGAt11B.1.1.70.000001
ORF1ab/nsp3968P968del1Cct-ct11B.1.1.70.000001
ORF1ab/nsp3968P968ECCTGAG11B.1.1.70.000001
ORF1ab/nsp3968P968SCctTct11B.1.1.700.000341
ORF1ab/nsp3968P968LcCtcTt11B.1.1150.021739
ORF1ab/nsp3968P968LcCtcTt11B.1.1580.02381
ORF1ab/nsp3968P968LcCtcTt11B.1.160.310.008065
ORF1ab/nsp3968P968LcCtcTt11B.1.177.120.000152
ORF1ab/nsp3968P968LcCtcTt11B.1.177.150.000631
ORF1ab/nsp3968P968SCctTct11B.1.177.210.000076
ORF1ab/nsp3968P968PccTccC11B.1.177.450.000381
ORF1ab/nsp3968P968SCctTct11B.1.177.460.000918
ORF1ab/nsp3968P968PccTccA11B.1.177.70.000165
ORF1ab/nsp3968P968HcCtcAt11B.1.177.860.000183
ORF1ab/nsp3968P968del1Cct-ct11B.1.20.000009
ORF1ab/nsp3968P968PccTccG11B.1.20.000009
ORF1ab/nsp3968P968LcCtcTt11B.1.2100.002132
ORF1ab/nsp3968P968SCctTct11B.1.221.40.004167
ORF1ab/nsp3968P968LcCtcTt11B.1.2320.000537
ORF1ab/nsp3968P968SCctTct11B.1.2340.000132
ORF1ab/nsp3968P968LcCtcTt11B.1.2370.004975
ORF1ab/nsp3968P968LcCtcTt11B.1.2390.001221
ORF1ab/nsp3968P968PccTccC11B.1.2400.000216
ORF1ab/nsp3968P968SCctTct11B.1.2430.00007
ORF1ab/nsp3968P968PccTccG11B.1.2580.000067
ORF1ab/nsp3968P968delCCT---11B.1.2580.000067
ORF1ab/nsp3968P968LcCtcTt11B.1.2600.003344
ORF1ab/nsp3968P968LcCtcTt11B.1.2630.047619
ORF1ab/nsp3968P968LcCtcTt11B.1.2790.000514
ORF1ab/nsp3968P968LcCtcTt11B.1.2800.007143
ORF1ab/nsp3968P968LcCtcTt11B.1.2820.014925
ORF1ab/nsp3968P968delCCT---11B.1.3190.003049
ORF1ab/nsp3968P968SCctTct11B.1.3280.03125
ORF1ab/nsp3968P968TCctAct11B.1.3290.000608
ORF1ab/nsp3968P968HcCtcAt11B.1.3320.003497
ORF1ab/nsp3968P968PccTccG11B.1.3510.00003
ORF1ab/nsp3968P968SCctTct11B.1.351.30.000876
ORF1ab/nsp3968P968SCctTct11B.1.3560.001727
ORF1ab/nsp3968P968HcCtcAt11B.1.360.000146
ORF1ab/nsp3968P968LcCtcTt11B.1.36.180.00042
ORF1ab/nsp3968P968LcCtcTt11B.1.36.240.006173
ORF1ab/nsp3968P968SCctTct11B.1.3670.000792
ORF1ab/nsp3968P968HcCtcAt11B.1.3750.00082
ORF1ab/nsp3968P968LcCtcTt11B.1.3890.001002
ORF1ab/nsp3968P968LcCtcTt11B.1.4080.00369
ORF1ab/nsp3968P968TCctAct11B.1.4170.028571
ORF1ab/nsp3968P968LcCtcTt11B.1.4200.010417
ORF1ab/nsp3968P968LcCtcTt11B.1.4320.011236
ORF1ab/nsp3968P968del1Cct-ct11B.1.4340.052632
ORF1ab/nsp3968P968LcCtcTt11B.1.4380.006536
ORF1ab/nsp3968P968LcCtcTt11B.1.4430.004673
ORF1ab/nsp3968P968LcCtcTt11B.1.4530.003236
ORF1ab/nsp3968P968LcCtcTt11B.1.4590.004082
ORF1ab/nsp3968P968PccTccA11B.1.4620.007246
ORF1ab/nsp3968P968SCctTct11B.1.466.20.000391
ORF1ab/nsp3968P968SCctTct11B.1.4690.00361
ORF1ab/nsp3968P968SCctTct11B.1.4700.001404
ORF1ab/nsp3968P968LcCtcTt11B.1.4700.001404
ORF1ab/nsp3968P968LcCtcTt11B.1.4940.034483
ORF1ab/nsp3968P968FCCtTTt11B.1.5250.000113
ORF1ab/nsp3968P968XCCTTAG11B.1.5250.000113
ORF1ab/nsp3968P968QcCTcAG11B.1.5250.000113
ORF1ab/nsp3968P968ICCtATt11B.1.5250.000113
ORF1ab/nsp3968P968PccTccG11B.1.5250.000113
ORF1ab/nsp3968P968MCCTATG11B.1.5250.000113
ORF1ab/nsp3968P968NCCtAAt11B.1.5250.000113
ORF1ab/nsp3968P968KCCTAAG11B.1.5250.000113
ORF1ab/nsp3968P968YCCtTAt11B.1.5250.000113
ORF1ab/nsp3968P968HcCtcAt11B.1.5250.000113
ORF1ab/nsp3968P968LcCtcTt11B.1.5270.003704
ORF1ab/nsp3968P968LcCtcTt11B.1.5450.014493
ORF1ab/nsp3968P968LcCtcTt11B.1.5650.00081
ORF1ab/nsp3968P968SCctTct11B.1.5750.000303
ORF1ab/nsp3968P968SCctTct11B.1.5760.000907
ORF1ab/nsp3968P968SCctTct11B.1.5950.000261
ORF1ab/nsp3968P968HcCtcAt11B.1.5960.000087
ORF1ab/nsp3968P968TCctAct11B.1.617.20.000004
ORF1ab/nsp3968P968del1ccTcc-11B.1.617.20.000004
ORF1ab/nsp3968P968delCCT---11B.1.617.20.000004
ORF1ab/nsp3968P968SCctTct11B.1.6180.004032
ORF1ab/nsp3968P968SCctTct11B.1.6190.000871
ORF1ab/nsp3968P968HcCtcAt11B.1.621.10.000506
ORF1ab/nsp3968P968HcCtcAt11B.1.6230.000536
ORF1ab/nsp3968P968LcCtcTt11B.1.6280.000352
ORF1ab/nsp3968P968LcCtcTt11B.1.810.021277
ORF1ab/nsp3968P968delCCT---11B.150.017544
ORF1ab/nsp3968P968SCctTct11B.30.000831
ORF1ab/nsp3968P968SCctTct11B.400.000364
ORF1ab/nsp3968P968LcCtcTt11B.60.00091
ORF1ab/nsp3968P968LcCtcTt11C.350.000774
ORF1ab/nsp3968P968del2cCTc--11C.370.000116
ORF1ab/nsp3968P968HcCtcAt11C.37.10.002618
ORF1ab/nsp3968P968LcCtcTt11C.37.10.002618
ORF1ab/nsp3968P968LcCtcTt11N.90.005952
ORF1ab/nsp3968P968HcCtcAt11P.10.000016
ORF1ab/nsp3968P968XCCTTAA11P.10.000016
ORF1ab/nsp3968P968KCCTAAA11P.10.000016
ORF1ab/nsp3968P968FCCtTTt11P.10.000016
ORF1ab/nsp3968P968NCCtAAt11P.10.000016
ORF1ab/nsp3968P968YCCtTAt11P.10.000016
ORF1ab/nsp3968P968SCctTct11P.1.110.010204
ORF1ab/nsp3968P968SCctTct11P.1.120.000484
ORF1ab/nsp3968P968LcCtcTt11P.1.120.000484
ORF1ab/nsp3968P968PccTccA11P.1.140.000048
ORF1ab/nsp3968P968HcCtcAt11P.1.70.000319
ORF1ab/nsp3968P968LcCtcTt11P.20.000187
ORF1ab/nsp3968P968HcCtcAt11P.20.000187
ORF1ab/nsp3968P968LcCtcTt11Q.30.000145
ORF1ab/nsp3968P968LcCtcTt11Q.40.000455
ORF1ab/nsp3968P968LcCtcTt11W.20.004831
ORF1ab/nsp3968P968LcCtcTt11Y.10.012821

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.