CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 943 | T943T | T1761T | syn | acC | acT | 3243 | 3163 | 0.975331 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943T | T1761T | syn | acC | acA | 3243 | 79 | 0.0243602 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943T | T1761T | syn | acC | acG | 3243 | 1 | 0.000308356 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943I | T1761I | nonsyn | aCc | aTc | 1172 | 1171 | 0.999147 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943I | T1761I | nonsyn | aCC | aTT | 1172 | 1 | 0.000853242 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943N | T1761N | nonsyn | aCc | aAc | 118 | 118 | 1 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943A | T1761A | nonsyn | Acc | Gcc | 106 | 102 | 0.962264 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943A | T1761A | nonsyn | AcC | GcA | 106 | 4 | 0.0377358 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943del | T1761del | del | ACC | --- | 23 | 23 | 1 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943S | T1761S | nonsyn | aCc | aGc | 7 | 7 | 1 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943del1 | T1761del1 | del | aCc | a-c | 6 | 5 | 0.833333 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943del1 | T1761del1 | del | Acc | -cc | 6 | 1 | 0.166667 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943H | T1761H | nonsyn | ACc | CAc | 3 | 3 | 1 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943del2 | T1761del2 | del | aCC | a-- | 3 | 2 | 0.666667 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943del2 | T1761del2 | del | ACc | --c | 3 | 1 | 0.333333 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943P | T1761P | nonsyn | Acc | Ccc | 2 | 2 | 1 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943V | T1761V | nonsyn | ACC | GTT | 2 | 1 | 0.5 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943V | T1761V | nonsyn | ACC | GTG | 2 | 1 | 0.5 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943C | T1761C | nonsyn | ACc | TGc | 1 | 1 | 1 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943R | T1761R | nonsyn | ACC | CGT | 1 | 1 | 1 | 5546-5548 |
ORF1ab/nsp3 | 943 | T943M | T1761M | nonsyn | aCC | aTG | 1 | 1 | 1 | 5546-5548 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3163 | 3243 | All | 0.000605 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 79 | 3243 | All | 0.000015 |
ORF1ab/nsp3 | 943 | T943T | acC | acG | 1 | 3243 | All | 0 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1171 | 1172 | All | 0.000224 |
ORF1ab/nsp3 | 943 | T943I | aCC | aTT | 1 | 1172 | All | 0 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 983 | 983 | B.1.1.420 | 0.988934 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 659 | 663 | B.1.1.7 | 0.00059 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 4 | 663 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 572 | 575 | AY.4 | 0.00089 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 3 | 575 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 189 | 190 | B.1.617.2 | 0.000712 |
ORF1ab/nsp3 | 943 | T943I | aCC | aTT | 1 | 190 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 158 | 158 | B.1.1.7 | 0.000141 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 145 | 147 | B.1.1 | 0.00263 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 2 | 147 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 120 | 120 | AY.100 | 0.005521 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 118 | 118 | All | 0.000023 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 109 | 111 | B.1 | 0.000998 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 2 | 111 | B.1 | 0.000018 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 105 | 108 | B.1.177 | 0.001383 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 3 | 108 | B.1.177 | 0.00004 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 107 | 107 | B.1.177 | 0.001409 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 102 | 106 | All | 0.00002 |
ORF1ab/nsp3 | 943 | T943A | AcC | GcA | 4 | 106 | All | 0.000001 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 82 | 89 | B.1.617.2 | 0.000309 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 7 | 89 | B.1.617.2 | 0.000026 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 75 | 75 | B.1.1.7 | 0.000067 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 75 | 75 | B.1.177.60 | 0.016383 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 57 | 57 | B.1.1.214 | 0.003161 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 52 | 52 | B.1.595.1 | 0.304094 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 37 | 37 | AY.4 | 0.000058 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 34 | 35 | AY.102 | 0.000901 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 35 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 33 | 33 | B.1.1.316 | 0.030527 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 26 | 30 | AY.43 | 0.000115 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 4 | 30 | AY.43 | 0.000018 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 29 | 29 | B.1.1 | 0.000526 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 27 | 28 | B.1.1.1 | 0.008821 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 28 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 27 | 27 | B.1.2 | 0.000238 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 20 | 25 | B.1.2 | 0.000176 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 5 | 25 | B.1.2 | 0.000044 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 24 | 24 | AY.33 | 0.001603 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 23 | 23 | All | 0.000004 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 22 | 22 | AY.3 | 0.000219 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 22 | 22 | B.1 | 0.000202 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 20 | 20 | AY.5.4 | 0.005534 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 18 | 18 | AY.46.6 | 0.0013 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 18 | 18 | B.1.525 | 0.002037 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 17 | 17 | B.1.177.54 | 0.010309 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 14 | 16 | AY.103 | 0.000087 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 2 | 16 | AY.103 | 0.000012 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 13 | 16 | AY.25 | 0.000078 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 3 | 16 | AY.25 | 0.000018 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 16 | 16 | AY.44 | 0.000097 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 15 | 15 | B.1.36.8 | 0.015 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 14 | 15 | P.1 | 0.000221 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 15 | P.1 | 0.000016 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 7 | 13 | B.1.1.519 | 0.000278 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 6 | 13 | B.1.1.519 | 0.000238 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 13 | 13 | B.1.1.63 | 0.005015 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 13 | 13 | B.1.1.7 | 0.000012 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 8 | 11 | AY.29 | 0.000126 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 11 | AY.29 | 0.000047 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 10 | 10 | AY.103 | 0.000062 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 10 | 10 | AY.54 | 0.000953 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 10 | 10 | B.1.427 | 0.000505 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 9 | 9 | AY.25 | 0.000054 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 6 | 9 | AY.39 | 0.000148 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 3 | 9 | AY.39 | 0.000074 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 9 | 9 | AY.71 | 0.004276 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 9 | 9 | AY.98 | 0.000711 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 9 | 9 | B.1.160 | 0.000281 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 8 | 8 | A.27 | 0.013245 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 8 | 8 | AY.26 | 0.000226 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 8 | 8 | AY.42 | 0.000322 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 7 | 7 | A.29 | 0.037234 |
ORF1ab/nsp3 | 943 | T943S | aCc | aGc | 7 | 7 | All | 0.000001 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 7 | 7 | B.1.1.222 | 0.001428 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 7 | 7 | B.1.1.348 | 0.005573 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 7 | 7 | B.1.429 | 0.000165 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 7 | 7 | B.1.429 | 0.000165 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 7 | 7 | P.1 | 0.00011 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 7 | 7 | P.1.14 | 0.000335 |
ORF1ab/nsp3 | 943 | T943del1 | aCc | a-c | 5 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 943 | T943del1 | Acc | -cc | 1 | 6 | All | 0 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 6 | 6 | AY.37 | 0.001896 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 6 | 6 | AY.92 | 0.001724 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 6 | 6 | B.1.128 | 0.003812 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 6 | 6 | B.1.36 | 0.000875 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 6 | 6 | B.1.617.2 | 0.000023 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 5 | 5 | AY.5 | 0.000103 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 5 | AY.75 | 0.000168 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 2 | 5 | AY.75 | 0.000112 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 5 | 5 | B.1.1.419 | 0.037037 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 5 | 5 | B.1.160 | 0.000156 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 5 | 5 | B.1.385 | 0.053191 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp3 | 943 | T943A | AcC | GcA | 4 | 4 | 0.222222 | |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 4 | 4 | AY.100 | 0.000184 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 4 | 4 | AY.102 | 0.000106 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 4 | 4 | AY.119 | 0.000141 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 4 | 4 | AY.20 | 0.000155 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 4 | 4 | AY.39 | 0.000099 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 4 | 4 | B.1.526 | 0.000094 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 3 | 0.111111 | |
ORF1ab/nsp3 | 943 | T943T | acC | acG | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 3 | AD.2 | 0.000657 |
ORF1ab/nsp3 | 943 | T943H | ACc | CAc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp3 | 943 | T943del2 | aCC | a-- | 2 | 3 | All | 0 |
ORF1ab/nsp3 | 943 | T943del2 | ACc | --c | 1 | 3 | All | 0 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 3 | AY.119 | 0.000071 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 3 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 943 | T943S | aCc | aGc | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 3 | AY.5.2 | 0.007389 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | B.1.1.301 | 0.003538 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | B.1.1.326 | 0.005282 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | B.1.210 | 0.006397 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | B.1.36.31 | 0.005254 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 3 | 3 | B.1.561 | 0.001191 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp3 | 943 | T943H | ACc | CAc | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 943 | T943P | Acc | Ccc | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 943 | T943V | ACC | GTT | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 943 | T943V | ACC | GTG | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | AT.1 | 0.010256 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 2 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 2 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | B | 0.000256 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.1.10 | 0.00223 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 2 | 2 | B.1.1.398 | 0.006452 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | B.1.1.484 | 0.2 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 2 | 2 | B.1.1.74 | 0.008621 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.1.83 | 0.00542 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 2 | 2 | B.1.177.65 | 0.001331 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | B.1.36.39 | 0.004435 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.416 | 0.002538 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.1.456 | 0.006536 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp3 | 943 | T943del1 | aCc | a-c | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 2 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 2 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | B.6.6 | 0.001778 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | C.35 | 0.001548 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 2 | 2 | W.4 | 0.002703 |
ORF1ab/nsp3 | 943 | T943M | aCC | aTG | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp3 | 943 | T943P | Acc | Ccc | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 943 | T943V | ACC | GTT | 1 | 1 | A.21 | 0.00277 |
ORF1ab/nsp3 | 943 | T943R | ACC | CGT | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 943 | T943M | aCC | aTG | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 943 | T943C | ACc | TGc | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 943 | T943S | aCc | aGc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 943 | T943P | Acc | Ccc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 943 | T943del1 | aCc | a-c | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 943 | T943del1 | aCc | a-c | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.91.1 | 0.004065 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 943 | T943S | aCc | aGc | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 943 | T943S | aCc | aGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 943 | T943del1 | aCc | a-c | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 943 | T943C | ACc | TGc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | B.1.1.142 | 0.017544 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.181 | 0.004545 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.200 | 0.007463 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.232 | 0.001815 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.334 | 0.016393 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.417 | 0.002703 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.417 | 0.002703 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.516 | 0.066667 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.56 | 0.017857 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.1.62 | 0.027027 |
ORF1ab/nsp3 | 943 | T943S | aCc | aGc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 943 | T943del2 | ACc | --c | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 943 | T943R | ACC | CGT | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.177.19 | 0.001431 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 943 | T943del1 | Acc | -cc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 943 | T943del2 | aCC | a-- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 943 | T943V | ACC | GTG | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.428.2 | 0.033333 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.466.1 | 0.007194 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 943 | T943del2 | aCC | a-- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 943 | T943H | ACc | CAc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | B.1.9.2 | 0.1 |
ORF1ab/nsp3 | 943 | T943del | ACC | --- | 1 | 1 | B.15 | 0.017544 |
ORF1ab/nsp3 | 943 | T943N | aCc | aAc | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | C.9 | 0.030303 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 943 | T943T | acC | acA | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 943 | T943A | Acc | Gcc | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp3 | 943 | T943T | acC | acT | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp3 | 943 | T943I | aCc | aTc | 1 | 1 | W.3 | 0.005263 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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