CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 942 & Codon = Gca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3942T942AT1760AnonsynAcaGca86850.9883725543-5545

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3942T942AAcaGca8586All0.000016
ORF1ab/nsp3942T942AAcaGca2323B.1.1600.000717
ORF1ab/nsp3942T942AAcaGca1414AY.40.000022
ORF1ab/nsp3942T942AAcaGca1313B.1.1.70.000012
ORF1ab/nsp3942T942AAcaGca1111B.1.617.20.000041
ORF1ab/nsp3942T942AAcaGca340.166667
ORF1ab/nsp3942T942AAcaGca44AY.440.000024
ORF1ab/nsp3942T942AAcaGca33B.1.3510.000089
ORF1ab/nsp3942T942AAcaGca22AY.590.001059
ORF1ab/nsp3942T942AAcaGca22AY.900.001369
ORF1ab/nsp3942T942AAcaGca22B.1.5260.000047
ORF1ab/nsp3942T942AAcaGca11AY.1060.000335
ORF1ab/nsp3942T942AAcaGca11AY.1190.000035
ORF1ab/nsp3942T942AAcaGca11AY.250.000006
ORF1ab/nsp3942T942AAcaGca11AY.30.00001
ORF1ab/nsp3942T942AAcaGca11AY.430.000004
ORF1ab/nsp3942T942AAcaGca11B.1.20.000009
ORF1ab/nsp3942T942AAcaGca11B.1.360.000146
ORF1ab/nsp3942T942AAcaGca11B.400.000364