CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 932 | V932A | V1750A | nonsyn | gTg | gCg | 68606 | 68589 | 0.999752 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932A | V1750A | nonsyn | gTG | gCA | 68606 | 9 | 0.000131184 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932A | V1750A | nonsyn | gTG | gCT | 68606 | 8 | 0.000116608 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932V | V1750V | syn | gtG | gtT | 3997 | 3706 | 0.927195 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932V | V1750V | syn | gtG | gtA | 3997 | 290 | 0.0725544 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932V | V1750V | syn | gtG | gtC | 3997 | 1 | 0.000250188 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932M | V1750M | nonsyn | Gtg | Atg | 1117 | 1117 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932L | V1750L | nonsyn | Gtg | Ttg | 240 | 207 | 0.8625 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932L | V1750L | nonsyn | Gtg | Ctg | 240 | 31 | 0.129167 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932L | V1750L | nonsyn | GtG | TtA | 240 | 2 | 0.00833333 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932del | V1750del | del | GTG | --- | 27 | 27 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932G | V1750G | nonsyn | gTg | gGg | 23 | 22 | 0.956522 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932G | V1750G | nonsyn | gTG | gGT | 23 | 1 | 0.0434783 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932E | V1750E | nonsyn | gTg | gAg | 13 | 13 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932T | V1750T | nonsyn | GTg | ACg | 7 | 7 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932del1 | V1750del1 | del | GTg | A-g | 5 | 2 | 0.4 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932del1 | V1750del1 | del | Gtg | -tg | 5 | 1 | 0.2 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932del1 | V1750del1 | del | gtG | gt- | 5 | 1 | 0.2 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932del1 | V1750del1 | del | gTg | g-g | 5 | 1 | 0.2 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932R | V1750R | nonsyn | GTg | AGg | 4 | 4 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932F | V1750F | nonsyn | GtG | TtC | 2 | 2 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932Y | V1750Y | nonsyn | GTG | TAC | 2 | 2 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932I | V1750I | nonsyn | GtG | AtT | 2 | 2 | 1 | 5513-5515 |
ORF1ab/nsp3 | 932 | V932del2 | V1750del2 | del | GTg | --g | 1 | 1 | 1 | 5513-5515 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 68589 | 68606 | All | 0.013118 |
ORF1ab/nsp3 | 932 | V932A | gTG | gCA | 9 | 68606 | All | 0.000002 |
ORF1ab/nsp3 | 932 | V932A | gTG | gCT | 8 | 68606 | All | 0.000002 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 63339 | 63353 | AY.29 | 0.999085 |
ORF1ab/nsp3 | 932 | V932A | gTG | gCA | 7 | 63353 | AY.29 | 0.00011 |
ORF1ab/nsp3 | 932 | V932A | gTG | gCT | 7 | 63353 | AY.29 | 0.00011 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 4528 | 4530 | AY.29.1 | 0.998456 |
ORF1ab/nsp3 | 932 | V932A | gTG | gCA | 2 | 4530 | AY.29.1 | 0.000441 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3706 | 3997 | All | 0.000709 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 290 | 3997 | All | 0.000055 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtC | 1 | 3997 | All | 0 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1823 | 1895 | B.1.1.7 | 0.001632 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 72 | 1895 | B.1.1.7 | 0.000064 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1117 | 1117 | All | 0.000214 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 985 | 994 | AY.4 | 0.001533 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 9 | 994 | AY.4 | 0.000014 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 542 | 542 | AY.4 | 0.000844 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 391 | 391 | AY.3 | 0.003889 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 254 | 254 | B.1.1.7 | 0.000227 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 207 | 240 | All | 0.00004 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ctg | 31 | 240 | All | 0.000006 |
ORF1ab/nsp3 | 932 | V932L | GtG | TtA | 2 | 240 | All | 0 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 128 | 128 | B.1.617.2 | 0.000482 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 127 | 127 | AY.74 | 0.014687 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 75 | 99 | B.1.617.2 | 0.000282 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 23 | 99 | B.1.617.2 | 0.000087 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtC | 1 | 99 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 99 | 99 | C.36.3.1 | 0.269022 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 75 | 75 | AY.93 | 0.020481 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 69 | 69 | B.1.617.2 | 0.00026 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 64 | 64 | AY.47 | 0.001991 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 62 | 62 | B.1.1.274 | 0.313131 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 54 | 54 | AY.4 | 0.000084 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ctg | 27 | 43 | B.1.1.7 | 0.000024 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 15 | 43 | B.1.1.7 | 0.000013 |
ORF1ab/nsp3 | 932 | V932L | GtG | TtA | 1 | 43 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 41 | 41 | AY.120 | 0.001524 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 40 | 40 | B.1.177 | 0.000527 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 35 | 35 | AY.117 | 0.002958 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 33 | 35 | AY.44 | 0.000201 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 35 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 33 | 33 | AY.102 | 0.000875 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 27 | 31 | AY.43 | 0.00012 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 4 | 31 | AY.43 | 0.000018 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 23 | 29 | B.1.2 | 0.000203 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 6 | 29 | B.1.2 | 0.000053 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 28 | 28 | AY.36 | 0.00415 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 27 | 27 | All | 0.000005 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 17 | 26 | AY.25 | 0.000102 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 9 | 26 | AY.25 | 0.000054 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 24 | 24 | AY.103 | 0.000149 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 24 | 24 | AY.46 | 0.002498 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 24 | 24 | B.1.2 | 0.000211 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 22 | 23 | All | 0.000004 |
ORF1ab/nsp3 | 932 | V932G | gTG | gGT | 1 | 23 | All | 0 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 23 | 23 | AY.4 | 0.000036 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 17 | 21 | B.1 | 0.000156 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 4 | 21 | B.1 | 0.000037 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 20 | 20 | AY.103 | 0.000124 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 20 | 20 | B.1.429 | 0.000471 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 16 | 16 | AY.42 | 0.000644 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 16 | 16 | AY.79 | 0.01937 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 15 | 15 | AY.111 | 0.002747 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 15 | 15 | AY.48 | 0.006977 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 14 | 14 | AY.9 | 0.000946 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 13 | 13 | All | 0.000002 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 13 | 13 | B.1.160 | 0.000405 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 12 | 12 | AY.3 | 0.000119 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 12 | 12 | AY.43 | 0.000053 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 12 | 12 | B.1.396 | 0.008469 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 6 | 11 | AY.119 | 0.000212 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 5 | 11 | AY.119 | 0.000177 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 9 | 10 | P.1 | 0.000142 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 10 | P.1 | 0.000016 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 9 | 9 | AY.26 | 0.000255 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 9 | 9 | AY.39 | 0.000222 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 9 | 9 | AY.5 | 0.000186 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 9 | 9 | B.1 | 0.000082 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 8 | 9 | B.1 | 0.000073 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ctg | 1 | 9 | B.1 | 0.000009 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 9 | 9 | B.1.1 | 0.000163 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 9 | 9 | B.1.617.2 | 0.000034 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 6 | 8 | AY.103 | 0.000037 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 8 | AY.103 | 0.000012 |
ORF1ab/nsp3 | 932 | V932T | GTg | ACg | 7 | 7 | All | 0.000001 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 7 | 7 | AY.34 | 0.000679 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 6 | 7 | AY.39 | 0.000148 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 7 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 7 | 7 | AY.39.1 | 0.000277 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 7 | 7 | AY.4.2 | 0.000152 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 7 | 7 | AY.4.5 | 0.000752 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 7 | 7 | AY.41 | 0.002058 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 7 | 7 | AY.43 | 0.000031 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 7 | 7 | AY.88 | 0.006189 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 7 | 7 | B.1.1 | 0.000127 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 7 | 7 | B.1.1.216 | 0.006233 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 7 | 7 | B.1.214 | 0.025641 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 6 | 7 | D.2 | 0.00045 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ctg | 1 | 7 | D.2 | 0.000075 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 6 | 6 | AY.33 | 0.000401 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 6 | 6 | AY.9.2 | 0.00022 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 6 | 6 | P.1 | 0.000095 |
ORF1ab/nsp3 | 932 | V932del1 | GTg | A-g | 2 | 5 | All | 0 |
ORF1ab/nsp3 | 932 | V932del1 | gTg | g-g | 1 | 5 | All | 0 |
ORF1ab/nsp3 | 932 | V932del1 | Gtg | -tg | 1 | 5 | All | 0 |
ORF1ab/nsp3 | 932 | V932del1 | gtG | gt- | 1 | 5 | All | 0 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 4 | 5 | AY.103 | 0.000025 |
ORF1ab/nsp3 | 932 | V932A | gTG | gCT | 1 | 5 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp3 | 932 | V932T | GTg | ACg | 5 | 5 | AY.29 | 0.000079 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 5 | B.1.177 | 0.00004 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 5 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 5 | 5 | B.1.551 | 0.006452 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 5 | 5 | B.1.621 | 0.000443 |
ORF1ab/nsp3 | 932 | V932R | GTg | AGg | 4 | 4 | 0.222222 | |
ORF1ab/nsp3 | 932 | V932R | GTg | AGg | 4 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 4 | 4 | AY.111 | 0.000733 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 4 | 4 | AY.39.1.1 | 0.002899 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 4 | 4 | AY.42 | 0.000161 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 4 | 4 | AY.93 | 0.001092 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 4 | 4 | B | 0.000511 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 3 | 4 | B.1 | 0.000027 |
ORF1ab/nsp3 | 932 | V932G | gTG | gGT | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 4 | 4 | B.1.1.294 | 0.005063 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 4 | B.1.160 | 0.000094 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 4 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 4 | 4 | B.1.160.26 | 0.009685 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 3 | 4 | B.1.351 | 0.000089 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 4 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 4 | 4 | B.1.36.22 | 0.004831 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AD.2 | 0.000657 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 3 | AY.100 | 0.000092 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 3 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AY.105 | 0.001929 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | AY.12 | 0.000948 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 3 | AY.20 | 0.000078 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 3 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 3 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 3 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AY.40 | 0.002893 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | AY.68 | 0.000821 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | AY.91 | 0.002191 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 3 | B.1.1.1 | 0.000653 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 3 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | B.1.1.305 | 0.011583 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 3 | 3 | B.1.1.39 | 0.001529 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 3 | B.1.1.519 | 0.000079 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 3 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 3 | 3 | B.1.243 | 0.000209 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | C.36.3 | 0.001702 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp3 | 932 | V932Y | GTG | TAC | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 2 | 2 | A.23.1 | 0.001408 |
ORF1ab/nsp3 | 932 | V932I | GtG | AtT | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 932 | V932Y | GTG | TAC | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 932 | V932F | GtG | TtC | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 2 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 2 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 2 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 2 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.63 | 0.000774 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.64 | 0.00119 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.86 | 0.00166 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp3 | 932 | V932del1 | GTg | A-g | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ctg | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 2 | B.1.1.54 | 0.006042 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 2 | B.1.206 | 0.001631 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 2 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 2 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp3 | 932 | V932T | GTg | ACg | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | A.25 | 0.018182 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp3 | 932 | V932del2 | GTg | --g | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 932 | V932I | GtG | AtT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 932 | V932T | GTg | ACg | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp3 | 932 | V932del1 | gTg | g-g | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 932 | V932del2 | GTg | --g | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 932 | V932F | GtG | TtC | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | B.1.1.142 | 0.017544 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp3 | 932 | V932L | GtG | TtA | 1 | 1 | B.1.1.300 | 0.010753 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.1.324 | 0.052632 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.1.374 | 0.002375 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp3 | 932 | V932F | GtG | TtC | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 932 | V932I | GtG | AtT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.289 | 0.00266 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtA | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 932 | V932del1 | Gtg | -tg | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.537 | 0.02 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | B.1.549 | 0.007194 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.1.572 | 0.025 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 932 | V932G | gTg | gGg | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 932 | V932del1 | gtG | gt- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ttg | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp3 | 932 | V932del | GTG | --- | 1 | 1 | B.15 | 0.017544 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp3 | 932 | V932A | gTg | gCg | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 932 | V932E | gTg | gAg | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp3 | 932 | V932M | Gtg | Atg | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp3 | 932 | V932V | gtG | gtT | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp3 | 932 | V932L | Gtg | Ctg | 1 | 1 | Q.4 | 0.000455 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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