CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 927

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3927K927IK1745InonsynaAaaTa20420415498-5500
ORF1ab/nsp3927K927RK1745RnonsynaAaaGa11611615498-5500
ORF1ab/nsp3927K927KK1745KsynaaAaaG656515498-5500
ORF1ab/nsp3927K927EK1745EnonsynAaaGaa383815498-5500
ORF1ab/nsp3927K927delK1745deldelAAA---303015498-5500
ORF1ab/nsp3927K927del1K1745del1delAaa-aa191915498-5500
ORF1ab/nsp3927K927TK1745TnonsynaAaaCa14130.9285715498-5500
ORF1ab/nsp3927K927TK1745TnonsynaAAaCT1410.07142865498-5500
ORF1ab/nsp3927K927QK1745QnonsynAaaCaa101015498-5500
ORF1ab/nsp3927K927NK1745NnonsynaaAaaT740.5714295498-5500
ORF1ab/nsp3927K927NK1745NnonsynaaAaaC730.4285715498-5500
ORF1ab/nsp3927K927del2K1745del2delAAa--a5515498-5500
ORF1ab/nsp3927K927SK1745SnonsynaAAaGT4415498-5500
ORF1ab/nsp3927K927XK1745XnonsynAaaTaa3315498-5500
ORF1ab/nsp3927K927CK1745CnonsynAAATGT3315498-5500
ORF1ab/nsp3927K927LK1745LnonsynAAaTTa3315498-5500
ORF1ab/nsp3927K927FK1745FnonsynAAATTT1115498-5500
ORF1ab/nsp3927K927YK1745YnonsynAaATaT1115498-5500

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3927K927IaAaaTa204204All0.000039
ORF1ab/nsp3927K927IaAaaTa188188AV.10.949495
ORF1ab/nsp3927K927RaAaaGa116116All0.000022
ORF1ab/nsp3927K927KaaAaaG6565All0.000012
ORF1ab/nsp3927K927RaAaaGa4747B.1.1.70.000042
ORF1ab/nsp3927K927EAaaGaa3838All0.000007
ORF1ab/nsp3927K927delAAA---3030All0.000006
ORF1ab/nsp3927K927RaAaaGa2929B.1.1770.000382
ORF1ab/nsp3927K927EAaaGaa2626B.1.1.70.000023
ORF1ab/nsp3927K927KaaAaaG2222B.1.1.70.00002
ORF1ab/nsp3927K927del1Aaa-aa1919All0.000004
ORF1ab/nsp3927K927KaaAaaG1919B.1.3240.030498
ORF1ab/nsp3927K927IaAaaTa1515AY.46.60.001083
ORF1ab/nsp3927K927TaAaaCa1314All0.000002
ORF1ab/nsp3927K927TaAAaCT114All0
ORF1ab/nsp3927K927QAaaCaa1010All0.000002
ORF1ab/nsp3927K927NaaAaaT47All0.000001
ORF1ab/nsp3927K927NaaAaaC37All0.000001
ORF1ab/nsp3927K927delAAA---77B.1.1.70.000006
ORF1ab/nsp3927K927del1Aaa-aa66B.1.20.000053
ORF1ab/nsp3927K927RaAaaGa66B.1.617.20.000023
ORF1ab/nsp3927K927del2AAa--a55All0.000001
ORF1ab/nsp3927K927SaAAaGT440.222222
ORF1ab/nsp3927K927SaAAaGT44All0.000001
ORF1ab/nsp3927K927EAaaGaa44B.1.617.20.000015
ORF1ab/nsp3927K927QAaaCaa44B.1.617.20.000015
ORF1ab/nsp3927K927LAAaTTa33All0.000001
ORF1ab/nsp3927K927CAAATGT33All0.000001
ORF1ab/nsp3927K927XAaaTaa33All0.000001
ORF1ab/nsp3927K927KaaAaaG33AY.200.000117
ORF1ab/nsp3927K927RaAaaGa33AY.240.001293
ORF1ab/nsp3927K927RaAaaGa33AY.330.0002
ORF1ab/nsp3927K927KaaAaaG33AY.390.000074
ORF1ab/nsp3927K927delAAA---33AY.40.000005
ORF1ab/nsp3927K927TaAaaCa33AY.4.2.10.000447
ORF1ab/nsp3927K927QAaaCaa33B.1.1.2140.000166
ORF1ab/nsp3927K927LAAaTTa33B.1.617.20.000011
ORF1ab/nsp3927K927KaaAaaG33B.1.617.20.000011
ORF1ab/nsp3927K927CAAATGT220.111111
ORF1ab/nsp3927K927delAAA---220.111111
ORF1ab/nsp3927K927del1Aaa-aa22AY.250.000012
ORF1ab/nsp3927K927RaAaaGa22AY.250.000012
ORF1ab/nsp3927K927RaAaaGa22AY.39.10.000079
ORF1ab/nsp3927K927EAaaGaa22AY.40.000003
ORF1ab/nsp3927K927RaAaaGa22AY.40.000003
ORF1ab/nsp3927K927TaAaaCa22AY.430.000009
ORF1ab/nsp3927K927EAaaGaa22B.10.000018
ORF1ab/nsp3927K927RaAaaGa22B.10.000018
ORF1ab/nsp3927K927del1Aaa-aa22B.1.10.000036
ORF1ab/nsp3927K927TaAaaCa22B.1.3510.000059
ORF1ab/nsp3927K927delAAA---22B.1.360.000292
ORF1ab/nsp3927K927NaaAaaC22B.1.617.10.000258
ORF1ab/nsp3927K927delAAA---22B.1.617.20.000008
ORF1ab/nsp3927K927RaAaaGa22P.20.000373
ORF1ab/nsp3927K927RaAaaGa11A.20.000662
ORF1ab/nsp3927K927delAAA---11A.2.20.001689
ORF1ab/nsp3927K927YAaATaT11All0
ORF1ab/nsp3927K927FAAATTT11All0
ORF1ab/nsp3927K927RaAaaGa11AY.1020.000027
ORF1ab/nsp3927K927KaaAaaG11AY.1020.000027
ORF1ab/nsp3927K927RaAaaGa11AY.1030.000006
ORF1ab/nsp3927K927EAaaGaa11AY.1030.000006
ORF1ab/nsp3927K927delAAA---11AY.1080.001103
ORF1ab/nsp3927K927del1Aaa-aa11AY.1130.000142
ORF1ab/nsp3927K927KaaAaaG11AY.1140.000231
ORF1ab/nsp3927K927del2AAa--a11AY.120.10.000321
ORF1ab/nsp3927K927RaAaaGa11AY.260.000028
ORF1ab/nsp3927K927KaaAaaG11AY.260.000028
ORF1ab/nsp3927K927TaAaaCa11AY.260.000028
ORF1ab/nsp3927K927delAAA---11AY.260.000028
ORF1ab/nsp3927K927delAAA---11AY.30.00001
ORF1ab/nsp3927K927RaAaaGa11AY.30.00001
ORF1ab/nsp3927K927KaaAaaG11AY.40.000002
ORF1ab/nsp3927K927NaaAaaC11AY.40.000002
ORF1ab/nsp3927K927RaAaaGa11AY.430.000004
ORF1ab/nsp3927K927del1Aaa-aa11AY.430.000004
ORF1ab/nsp3927K927KaaAaaG11AY.430.000004
ORF1ab/nsp3927K927RaAaaGa11AY.440.000006
ORF1ab/nsp3927K927NaaAaaT11AY.50.000021
ORF1ab/nsp3927K927KaaAaaG11AY.50.000021
ORF1ab/nsp3927K927EAaaGaa11AY.5.40.000277
ORF1ab/nsp3927K927delAAA---11AY.660.00107
ORF1ab/nsp3927K927delAAA---11AY.670.000464
ORF1ab/nsp3927K927del2AAa--a11AY.680.000274
ORF1ab/nsp3927K927RaAaaGa11AY.750.000056
ORF1ab/nsp3927K927KaaAaaG11AY.830.001724
ORF1ab/nsp3927K927RaAaaGa11AY.950.000761
ORF1ab/nsp3927K927delAAA---11AY.99.10.001553
ORF1ab/nsp3927K927del1Aaa-aa11B0.000128
ORF1ab/nsp3927K927del2AAa--a11B0.000128
ORF1ab/nsp3927K927XAaaTaa11B.10.000009
ORF1ab/nsp3927K927TaAaaCa11B.10.000009
ORF1ab/nsp3927K927del1Aaa-aa11B.10.000009
ORF1ab/nsp3927K927KaaAaaG11B.10.000009
ORF1ab/nsp3927K927delAAA---11B.1.10.000018
ORF1ab/nsp3927K927XAaaTaa11B.1.10.000018
ORF1ab/nsp3927K927RaAaaGa11B.1.10.000018
ORF1ab/nsp3927K927delAAA---11B.1.1.1420.017544
ORF1ab/nsp3927K927EAaaGaa11B.1.1.2320.001815
ORF1ab/nsp3927K927TaAaaCa11B.1.1.250.000569
ORF1ab/nsp3927K927KaaAaaG11B.1.1.2970.002237
ORF1ab/nsp3927K927KaaAaaG11B.1.1.3170.000412
ORF1ab/nsp3927K927TaAaaCa11B.1.1.70.000001
ORF1ab/nsp3927K927QAaaCaa11B.1.1.70.000001
ORF1ab/nsp3927K927YAaATaT11B.1.1.70.000001
ORF1ab/nsp3927K927FAAATTT11B.1.1.70.000001
ORF1ab/nsp3927K927XAaaTaa11B.1.1.70.000001
ORF1ab/nsp3927K927CAAATGT11B.1.1.70.000001
ORF1ab/nsp3927K927delAAA---11B.1.1600.000031
ORF1ab/nsp3927K927KaaAaaG11B.1.1600.000031
ORF1ab/nsp3927K927EAaaGaa11B.1.1950.005025
ORF1ab/nsp3927K927delAAA---11B.1.20.000009
ORF1ab/nsp3927K927RaAaaGa11B.1.20.000009
ORF1ab/nsp3927K927KaaAaaG11B.1.20.000009
ORF1ab/nsp3927K927NaaAaaT11B.1.2060.000816
ORF1ab/nsp3927K927del1Aaa-aa11B.1.2340.000132
ORF1ab/nsp3927K927delAAA---11B.1.2580.000067
ORF1ab/nsp3927K927KaaAaaG11B.1.258.110.000396
ORF1ab/nsp3927K927delAAA---11B.1.3190.003049
ORF1ab/nsp3927K927IaAaaTa11B.1.351.20.000303
ORF1ab/nsp3927K927RaAaaGa11B.1.3610.001289
ORF1ab/nsp3927K927del1Aaa-aa11B.1.3770.004566
ORF1ab/nsp3927K927TaAAaCT11B.1.4110.003704
ORF1ab/nsp3927K927RaAaaGa11B.1.4290.000024
ORF1ab/nsp3927K927KaaAaaG11B.1.4990.00105
ORF1ab/nsp3927K927TaAaaCa11B.1.5240.001406
ORF1ab/nsp3927K927del1Aaa-aa11B.1.5370.02
ORF1ab/nsp3927K927QAaaCaa11B.1.5610.000397
ORF1ab/nsp3927K927del1Aaa-aa11B.1.5750.000303
ORF1ab/nsp3927K927del2AAa--a11B.1.5960.000087
ORF1ab/nsp3927K927RaAaaGa11B.1.5960.000087
ORF1ab/nsp3927K927del2AAa--a11B.1.617.20.000004
ORF1ab/nsp3927K927del1Aaa-aa11B.1.617.20.000004
ORF1ab/nsp3927K927RaAaaGa11B.1.6210.000089
ORF1ab/nsp3927K927NaaAaaT11B.1.6210.000089
ORF1ab/nsp3927K927QAaaCaa11B.1.6250.002353
ORF1ab/nsp3927K927TaAaaCa11B.1.6270.00202
ORF1ab/nsp3927K927RaAaaGa11B.1.6370.000073
ORF1ab/nsp3927K927delAAA---11B.150.017544
ORF1ab/nsp3927K927NaaAaaT11C.360.000911
ORF1ab/nsp3927K927RaAaaGa11P.10.000016
ORF1ab/nsp3927K927RaAaaGa11P.1.20.001156
ORF1ab/nsp3927K927KaaAaaG11R.10.00009