CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 916

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3916Y916YY1734YsyntaCtaT3476347615465-5467
ORF1ab/nsp3916Y916HY1734HnonsynTacCac38438415465-5467
ORF1ab/nsp3916Y916CY1734CnonsyntActGc1401370.9785715465-5467
ORF1ab/nsp3916Y916CY1734CnonsyntACtGT14030.02142865465-5467
ORF1ab/nsp3916Y916FY1734FnonsyntActTc696915465-5467
ORF1ab/nsp3916Y916delY1734deldelTAC---313115465-5467
ORF1ab/nsp3916Y916NY1734NnonsynTacAac161615465-5467
ORF1ab/nsp3916Y916XY1734XnonsyntaCtaA7715465-5467
ORF1ab/nsp3916Y916SY1734SnonsyntActCc420.55465-5467
ORF1ab/nsp3916Y916SY1734SnonsyntACtCT420.55465-5467
ORF1ab/nsp3916Y916DY1734DnonsynTacGac3315465-5467
ORF1ab/nsp3916Y916LY1734LnonsynTAcCTc2215465-5467
ORF1ab/nsp3916Y916EY1734EnonsynTaCGaA1115465-5467
ORF1ab/nsp3916Y916VY1734VnonsynTACGTT1115465-5467

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3916Y916YtaCtaT34763476All0.000665
ORF1ab/nsp3916Y916YtaCtaT775775B.1.1.70.000694
ORF1ab/nsp3916Y916HTacCac384384All0.000073
ORF1ab/nsp3916Y916YtaCtaT257257B.1.20.002263
ORF1ab/nsp3916Y916YtaCtaT187187B.1.617.20.000704
ORF1ab/nsp3916Y916HTacCac167167B.1.1.3631
ORF1ab/nsp3916Y916YtaCtaT143143AY.40.000223
ORF1ab/nsp3916Y916CtActGc137140All0.000026
ORF1ab/nsp3916Y916CtACtGT3140All0.000001
ORF1ab/nsp3916Y916YtaCtaT127127B.1.1770.001672
ORF1ab/nsp3916Y916YtaCtaT124124AY.430.000549
ORF1ab/nsp3916Y916YtaCtaT100100B.1.10.001814
ORF1ab/nsp3916Y916YtaCtaT9494B.1.6280.033122
ORF1ab/nsp3916Y916YtaCtaT8181AY.30.000806
ORF1ab/nsp3916Y916YtaCtaT8080AY.440.000487
ORF1ab/nsp3916Y916YtaCtaT8080P.10.00126
ORF1ab/nsp3916Y916YtaCtaT7474AY.250.000445
ORF1ab/nsp3916Y916YtaCtaT7474B.1.177.600.016164
ORF1ab/nsp3916Y916FtActTc6969All0.000013
ORF1ab/nsp3916Y916CtActGc6161AY.40.000095
ORF1ab/nsp3916Y916YtaCtaT6161B.10.000559
ORF1ab/nsp3916Y916YtaCtaT5858AY.1030.00036
ORF1ab/nsp3916Y916HTacCac5454B.1.617.20.000203
ORF1ab/nsp3916Y916YtaCtaT5050B.1.1600.001559
ORF1ab/nsp3916Y916YtaCtaT4848B.1.1.4640.070692
ORF1ab/nsp3916Y916YtaCtaT4747B.1.1.370.009065
ORF1ab/nsp3916Y916YtaCtaT4747B.1.1100.21267
ORF1ab/nsp3916Y916FtActTc4141B.1.1.3180.012372
ORF1ab/nsp3916Y916YtaCtaT4040B.1.258.30.067002
ORF1ab/nsp3916Y916YtaCtaT3434B.1.360.004961
ORF1ab/nsp3916Y916YtaCtaT3434B.1.4290.0008
ORF1ab/nsp3916Y916delTAC---3131All0.000006
ORF1ab/nsp3916Y916YtaCtaT2828AY.470.000871
ORF1ab/nsp3916Y916YtaCtaT2828B.1.36.170.013834
ORF1ab/nsp3916Y916YtaCtaT2525AY.910.018262
ORF1ab/nsp3916Y916YtaCtaT2424B.1.3510.000713
ORF1ab/nsp3916Y916HTacCac2222AY.40.000034
ORF1ab/nsp3916Y916CtActGc2222B.1.1.70.00002
ORF1ab/nsp3916Y916YtaCtaT2222B.1.5260.000517
ORF1ab/nsp3916Y916HTacCac2121B.1.1.70.000019
ORF1ab/nsp3916Y916YtaCtaT2121B.1.4270.00106
ORF1ab/nsp3916Y916HTacCac2020AY.290.000315
ORF1ab/nsp3916Y916YtaCtaT1919AY.260.000538
ORF1ab/nsp3916Y916YtaCtaT1919B.1.177.730.010759
ORF1ab/nsp3916Y916YtaCtaT1717B.1.177.440.008822
ORF1ab/nsp3916Y916NTacAac1616All0.000003
ORF1ab/nsp3916Y916YtaCtaT1616B.1.177.160.010631
ORF1ab/nsp3916Y916YtaCtaT1515AY.1020.000398
ORF1ab/nsp3916Y916YtaCtaT1515AY.1210.00203
ORF1ab/nsp3916Y916YtaCtaT1515AY.4.20.000325
ORF1ab/nsp3916Y916YtaCtaT1515B.1.177.750.015609
ORF1ab/nsp3916Y916YtaCtaT1515B.1.5960.001307
ORF1ab/nsp3916Y916YtaCtaT1515B.1.6210.001328
ORF1ab/nsp3916Y916YtaCtaT1414AY.1050.009003
ORF1ab/nsp3916Y916YtaCtaT1414AY.1190.000494
ORF1ab/nsp3916Y916YtaCtaT1313B.1.2400.002802
ORF1ab/nsp3916Y916YtaCtaT1212AY.390.000297
ORF1ab/nsp3916Y916YtaCtaT1212B.40.02649
ORF1ab/nsp3916Y916YtaCtaT1111AY.200.000428
ORF1ab/nsp3916Y916YtaCtaT1111B.1.1.280.003424
ORF1ab/nsp3916Y916FtActTc1111B.1.1.70.00001
ORF1ab/nsp3916Y916YtaCtaT1111B.1.1.700.003752
ORF1ab/nsp3916Y916YtaCtaT1111C.370.001277
ORF1ab/nsp3916Y916YtaCtaT1010B.400.003643
ORF1ab/nsp3916Y916YtaCtaT99AY.540.000858
ORF1ab/nsp3916Y916YtaCtaT99B.1.1.3480.007166
ORF1ab/nsp3916Y916YtaCtaT99B.1.1.3970.02027
ORF1ab/nsp3916Y916YtaCtaT99B.1.1.5190.000357
ORF1ab/nsp3916Y916delTAC---99B.1.1.70.000008
ORF1ab/nsp3916Y916YtaCtaT99B.1.36.290.004656
ORF1ab/nsp3916Y916YtaCtaT99M.10.209302
ORF1ab/nsp3916Y916YtaCtaT88AY.1200.000297
ORF1ab/nsp3916Y916HTacCac88AY.430.000035
ORF1ab/nsp3916Y916HTacCac88B.10.000073
ORF1ab/nsp3916Y916YtaCtaT88B.1.160.110.045714
ORF1ab/nsp3916Y916YtaCtaT88B.1.177.230.02589
ORF1ab/nsp3916Y916YtaCtaT88B.3.10.013267
ORF1ab/nsp3916Y916XtaCtaA77All0.000001
ORF1ab/nsp3916Y916YtaCtaT77AY.1000.000322
ORF1ab/nsp3916Y916YtaCtaT77AY.1170.000592
ORF1ab/nsp3916Y916YtaCtaT77AY.140.000616
ORF1ab/nsp3916Y916YtaCtaT77AY.230.000488
ORF1ab/nsp3916Y916YtaCtaT77AY.60.000288
ORF1ab/nsp3916Y916YtaCtaT77AY.9.20.000257
ORF1ab/nsp3916Y916YtaCtaT77B.1.5610.002779
ORF1ab/nsp3916Y916CtActGc460.222222
ORF1ab/nsp3916Y916CtACtGT260.111111
ORF1ab/nsp3916Y916YtaCtaT66AY.1160.001721
ORF1ab/nsp3916Y916CtActGc66AY.250.000036
ORF1ab/nsp3916Y916YtaCtaT66AY.330.000401
ORF1ab/nsp3916Y916HTacCac66AY.390.000148
ORF1ab/nsp3916Y916YtaCtaT66AY.4.50.000645
ORF1ab/nsp3916Y916NTacAac66AY.50.000124
ORF1ab/nsp3916Y916YtaCtaT66AY.610.000629
ORF1ab/nsp3916Y916YtaCtaT66AY.980.000474
ORF1ab/nsp3916Y916HTacCac66B.1.1.2840.000644
ORF1ab/nsp3916Y916YtaCtaT66B.1.1.4090.016997
ORF1ab/nsp3916Y916NTacAac66B.1.1.70.000005
ORF1ab/nsp3916Y916HTacCac66B.1.1770.000079
ORF1ab/nsp3916Y916YtaCtaT55AY.290.000079
ORF1ab/nsp3916Y916YtaCtaT55AY.370.00158
ORF1ab/nsp3916Y916YtaCtaT55AY.450.000608
ORF1ab/nsp3916Y916HTacCac55AY.610.000524
ORF1ab/nsp3916Y916YtaCtaT55B.1.1.2220.00102
ORF1ab/nsp3916Y916FtActTc55B.1.20.000044
ORF1ab/nsp3916Y916YtaCtaT55B.1.2580.000333
ORF1ab/nsp3916Y916YtaCtaT55B.1.5250.000566
ORF1ab/nsp3916Y916YtaCtaT55B.1.6370.000365
ORF1ab/nsp3916Y916StACtCT240.111111
ORF1ab/nsp3916Y916StActCc240.111111
ORF1ab/nsp3916Y916YtaCtaT44A.23.10.002817
ORF1ab/nsp3916Y916StACtCT24All0
ORF1ab/nsp3916Y916StActCc24All0
ORF1ab/nsp3916Y916HTacCac44AY.250.000024
ORF1ab/nsp3916Y916HTacCac44AY.330.000267
ORF1ab/nsp3916Y916HTacCac44AY.440.000024
ORF1ab/nsp3916Y916YtaCtaT44AY.46.60.000289
ORF1ab/nsp3916Y916CtActGc44B.10.000037
ORF1ab/nsp3916Y916YtaCtaT44B.1.177.350.002764
ORF1ab/nsp3916Y916YtaCtaT44B.1.177.810.000757
ORF1ab/nsp3916Y916YtaCtaT44B.1.2210.000284
ORF1ab/nsp3916Y916YtaCtaT44B.1.5640.001704
ORF1ab/nsp3916Y916CtActGc44B.1.617.20.000015
ORF1ab/nsp3916Y916YtaCtaT44Q.80.00066
ORF1ab/nsp3916Y916DTacGac33All0.000001
ORF1ab/nsp3916Y916YtaCtaT33AY.1100.000338
ORF1ab/nsp3916Y916YtaCtaT33AY.1110.000549
ORF1ab/nsp3916Y916HTacCac33AY.1190.000106
ORF1ab/nsp3916Y916YtaCtaT33AY.29.10.000662
ORF1ab/nsp3916Y916CtActGc33AY.30.00003
ORF1ab/nsp3916Y916YtaCtaT33AY.350.000699
ORF1ab/nsp3916Y916YtaCtaT33AY.360.000445
ORF1ab/nsp3916Y916YtaCtaT33AY.39.10.000119
ORF1ab/nsp3916Y916FtActTc33AY.40.000005
ORF1ab/nsp3916Y916YtaCtaT33AY.460.000312
ORF1ab/nsp3916Y916YtaCtaT33AY.480.001395
ORF1ab/nsp3916Y916YtaCtaT33AY.50.000062
ORF1ab/nsp3916Y916YtaCtaT33AY.75.10.000541
ORF1ab/nsp3916Y916HTacCac33B.1.10.000054
ORF1ab/nsp3916Y916YtaCtaT33B.1.1.2140.000166
ORF1ab/nsp3916Y916CtActGc33B.1.1.3150.025424
ORF1ab/nsp3916Y916CtActGc33B.1.1.930.076923
ORF1ab/nsp3916Y916YtaCtaT33B.1.177.420.002683
ORF1ab/nsp3916Y916CtActGc33B.1.20.000026
ORF1ab/nsp3916Y916YtaCtaT33B.1.2430.000209
ORF1ab/nsp3916Y916HTacCac33B.1.4270.000151
ORF1ab/nsp3916Y916YtaCtaT33B.1.4990.003151
ORF1ab/nsp3916Y916YtaCtaT33D.20.000225
ORF1ab/nsp3916Y916YtaCtaT33P.1.150.000697
ORF1ab/nsp3916Y916LTAcCTc22All0
ORF1ab/nsp3916Y916HTacCac22AY.160.000759
ORF1ab/nsp3916Y916HTacCac22AY.260.000057
ORF1ab/nsp3916Y916HTacCac22AY.30.00002
ORF1ab/nsp3916Y916YtaCtaT22AY.310.037037
ORF1ab/nsp3916Y916delTAC---22AY.40.000003
ORF1ab/nsp3916Y916CtActGc22AY.430.000009
ORF1ab/nsp3916Y916delTAC---22AY.430.000009
ORF1ab/nsp3916Y916CtActGc22AY.440.000012
ORF1ab/nsp3916Y916YtaCtaT22AY.46.20.001271
ORF1ab/nsp3916Y916HTacCac22AY.470.000062
ORF1ab/nsp3916Y916YtaCtaT22AY.500.001599
ORF1ab/nsp3916Y916YtaCtaT22AY.530.000575
ORF1ab/nsp3916Y916YtaCtaT22AY.590.001059
ORF1ab/nsp3916Y916HTacCac22AY.70.000392
ORF1ab/nsp3916Y916YtaCtaT22AY.710.00095
ORF1ab/nsp3916Y916YtaCtaT22AY.99.20.000184
ORF1ab/nsp3916Y916YtaCtaT22B0.000256
ORF1ab/nsp3916Y916FtActTc22B.10.000018
ORF1ab/nsp3916Y916XtaCtaA22B.10.000018
ORF1ab/nsp3916Y916YtaCtaT22B.1.1.1700.002494
ORF1ab/nsp3916Y916YtaCtaT22B.1.1.2430.008163
ORF1ab/nsp3916Y916CtActGc22B.1.1.250.001137
ORF1ab/nsp3916Y916YtaCtaT22B.1.1.3060.000877
ORF1ab/nsp3916Y916YtaCtaT22B.1.1.3170.000823
ORF1ab/nsp3916Y916YtaCtaT22B.1.1.330.000842
ORF1ab/nsp3916Y916YtaCtaT22B.1.1.390.001019
ORF1ab/nsp3916Y916YtaCtaT22B.1.1.4480.004065
ORF1ab/nsp3916Y916LTAcCTc22B.1.1.70.000002
ORF1ab/nsp3916Y916YtaCtaT22B.1.1390.001466
ORF1ab/nsp3916Y916YtaCtaT22B.1.3200.002491
ORF1ab/nsp3916Y916YtaCtaT22B.1.351.50.001199
ORF1ab/nsp3916Y916delTAC---22B.1.360.000292
ORF1ab/nsp3916Y916YtaCtaT22B.1.4090.001563
ORF1ab/nsp3916Y916YtaCtaT22B.1.4380.013072
ORF1ab/nsp3916Y916YtaCtaT22B.1.5170.000854
ORF1ab/nsp3916Y916HTacCac22B.1.5250.000226
ORF1ab/nsp3916Y916YtaCtaT22B.1.5510.002581
ORF1ab/nsp3916Y916YtaCtaT22B.1.5820.000981
ORF1ab/nsp3916Y916HTacCac22B.1.5890.015152
ORF1ab/nsp3916Y916YtaCtaT22B.1.6090.000959
ORF1ab/nsp3916Y916delTAC---22B.1.617.20.000008
ORF1ab/nsp3916Y916YtaCtaT22B.1.6190.001742
ORF1ab/nsp3916Y916YtaCtaT22B.1.621.10.001012
ORF1ab/nsp3916Y916YtaCtaT22C.36.30.001134
ORF1ab/nsp3916Y916CtActGc22C.370.000232
ORF1ab/nsp3916Y916CtActGc22N.90.011905
ORF1ab/nsp3916Y916YtaCtaT22P.1.120.000968
ORF1ab/nsp3916Y916YtaCtaT22P.1.140.000096
ORF1ab/nsp3916Y916YtaCtaT22P.20.000373
ORF1ab/nsp3916Y916YtaCtaT22Q.30.00029
ORF1ab/nsp3916Y916VTACGTT11A0.000387
ORF1ab/nsp3916Y916YtaCtaT11A.10.000282
ORF1ab/nsp3916Y916delTAC---11A.2.20.001689
ORF1ab/nsp3916Y916YtaCtaT11A.30.002096
ORF1ab/nsp3916Y916VTACGTT11All0
ORF1ab/nsp3916Y916ETaCGaA11All0
ORF1ab/nsp3916Y916YtaCtaT11AT.10.005128
ORF1ab/nsp3916Y916YtaCtaT11AU.30.00211
ORF1ab/nsp3916Y916YtaCtaT11AV.10.005051
ORF1ab/nsp3916Y916HTacCac11AY.1000.000046
ORF1ab/nsp3916Y916HTacCac11AY.1020.000027
ORF1ab/nsp3916Y916XtaCtaA11AY.1030.000006
ORF1ab/nsp3916Y916HTacCac11AY.1030.000006
ORF1ab/nsp3916Y916YtaCtaT11AY.1070.000466
ORF1ab/nsp3916Y916delTAC---11AY.1080.001103
ORF1ab/nsp3916Y916HTacCac11AY.1130.000142
ORF1ab/nsp3916Y916FtActTc11AY.116.10.000311
ORF1ab/nsp3916Y916YtaCtaT11AY.116.10.000311
ORF1ab/nsp3916Y916CtActGc11AY.1170.000085
ORF1ab/nsp3916Y916YtaCtaT11AY.1180.000063
ORF1ab/nsp3916Y916YtaCtaT11AY.120.000316
ORF1ab/nsp3916Y916CtActGc11AY.160.00038
ORF1ab/nsp3916Y916YtaCtaT11AY.16.10.00047
ORF1ab/nsp3916Y916YtaCtaT11AY.190.00114
ORF1ab/nsp3916Y916CtActGc11AY.200.000039
ORF1ab/nsp3916Y916delTAC---11AY.260.000028
ORF1ab/nsp3916Y916YtaCtaT11AY.270.000065
ORF1ab/nsp3916Y916CtActGc11AY.290.000016
ORF1ab/nsp3916Y916HTacCac11AY.29.10.000221
ORF1ab/nsp3916Y916XtaCtaA11AY.30.00001
ORF1ab/nsp3916Y916delTAC---11AY.30.00001
ORF1ab/nsp3916Y916YtaCtaT11AY.3.10.000085
ORF1ab/nsp3916Y916YtaCtaT11AY.34.10.00051
ORF1ab/nsp3916Y916DTacGac11AY.34.10.00051
ORF1ab/nsp3916Y916YtaCtaT11AY.380.000499
ORF1ab/nsp3916Y916CtActGc11AY.390.000025
ORF1ab/nsp3916Y916DTacGac11AY.40.000002
ORF1ab/nsp3916Y916CtActGc11AY.4.20.000022
ORF1ab/nsp3916Y916HTacCac11AY.420.00004
ORF1ab/nsp3916Y916YtaCtaT11AY.420.00004
ORF1ab/nsp3916Y916FtActTc11AY.430.000004
ORF1ab/nsp3916Y916DTacGac11AY.430.000004
ORF1ab/nsp3916Y916HTacCac11AY.450.000122
ORF1ab/nsp3916Y916HTacCac11AY.46.10.001027
ORF1ab/nsp3916Y916HTacCac11AY.46.20.000635
ORF1ab/nsp3916Y916HTacCac11AY.50.000021
ORF1ab/nsp3916Y916YtaCtaT11AY.5.40.000277
ORF1ab/nsp3916Y916delTAC---11AY.660.00107
ORF1ab/nsp3916Y916delTAC---11AY.670.000464
ORF1ab/nsp3916Y916HTacCac11AY.7.20.000559
ORF1ab/nsp3916Y916YtaCtaT11AY.750.000056
ORF1ab/nsp3916Y916CtActGc11AY.75.10.00018
ORF1ab/nsp3916Y916CtActGc11AY.860.00083
ORF1ab/nsp3916Y916YtaCtaT11AY.9.10.000084
ORF1ab/nsp3916Y916YtaCtaT11AY.920.000287
ORF1ab/nsp3916Y916YtaCtaT11AY.950.000761
ORF1ab/nsp3916Y916YtaCtaT11AY.98.10.000048
ORF1ab/nsp3916Y916delTAC---11AY.99.10.001553
ORF1ab/nsp3916Y916YtaCtaT11AY.99.10.001553
ORF1ab/nsp3916Y916YtaCtaT11AZ.20.000821
ORF1ab/nsp3916Y916NTacAac11B0.000128
ORF1ab/nsp3916Y916NTacAac11B.10.000009
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.1110.014706
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.1170.009709
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.120.007463
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.1350.004695
ORF1ab/nsp3916Y916delTAC---11B.1.1.1420.017544
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.1570.000913
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.1640.005155
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.1760.000439
ORF1ab/nsp3916Y916FtActTc11B.1.1.1890.001513
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.1920.002309
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.2070.001182
ORF1ab/nsp3916Y916HTacCac11B.1.1.2140.000055
ORF1ab/nsp3916Y916CtActGc11B.1.1.2220.000204
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.250.000569
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.2770.000759
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.2840.000107
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.2880.001916
ORF1ab/nsp3916Y916HTacCac11B.1.1.290.010309
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.2940.001266
ORF1ab/nsp3916Y916XtaCtaA11B.1.1.3000.010753
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.3050.003861
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.3160.000925
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.3190.017544
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.3440.010753
ORF1ab/nsp3916Y916CtActGc11B.1.1.3480.000796
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.3780.007299
ORF1ab/nsp3916Y916HTacCac11B.1.1.390.00051
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.3980.003226
ORF1ab/nsp3916Y916ETaCGaA11B.1.1.3980.003226
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.4530.008475
ORF1ab/nsp3916Y916YtaCtaT11B.1.1.5260.003546
ORF1ab/nsp3916Y916XtaCtaA11B.1.1.70.000001
ORF1ab/nsp3916Y916CtActGc11B.1.1.890.006061
ORF1ab/nsp3916Y916YtaCtaT11B.1.1110.001175
ORF1ab/nsp3916Y916YtaCtaT11B.1.1310.008772
ORF1ab/nsp3916Y916YtaCtaT11B.1.1570.002985
ORF1ab/nsp3916Y916delTAC---11B.1.1600.000031
ORF1ab/nsp3916Y916CtActGc11B.1.1600.000031
ORF1ab/nsp3916Y916FtActTc11B.1.160.160.000929
ORF1ab/nsp3916Y916YtaCtaT11B.1.160.300.002976
ORF1ab/nsp3916Y916FtActTc11B.1.1770.000013
ORF1ab/nsp3916Y916CtActGc11B.1.1770.000013
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.150.000631
ORF1ab/nsp3916Y916delTAC---11B.1.177.160.000664
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.20.004545
ORF1ab/nsp3916Y916HTacCac11B.1.177.230.003236
ORF1ab/nsp3916Y916CtActGc11B.1.177.320.00135
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.40.000211
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.430.001477
ORF1ab/nsp3916Y916HTacCac11B.1.177.530.002392
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.540.000606
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.570.000281
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.670.007634
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.80.000752
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.830.001481
ORF1ab/nsp3916Y916YtaCtaT11B.1.177.860.000183
ORF1ab/nsp3916Y916HTacCac11B.1.20.000009
ORF1ab/nsp3916Y916delTAC---11B.1.20.000009
ORF1ab/nsp3916Y916YtaCtaT11B.1.220.001318
ORF1ab/nsp3916Y916YtaCtaT11B.1.2340.000132
ORF1ab/nsp3916Y916delTAC---11B.1.2580.000067
ORF1ab/nsp3916Y916HTacCac11B.1.2580.000067
ORF1ab/nsp3916Y916YtaCtaT11B.1.258.170.000104
ORF1ab/nsp3916Y916YtaCtaT11B.1.3060.005714
ORF1ab/nsp3916Y916delTAC---11B.1.3190.003049
ORF1ab/nsp3916Y916HTacCac11B.1.3510.00003
ORF1ab/nsp3916Y916YtaCtaT11B.1.351.20.000303
ORF1ab/nsp3916Y916YtaCtaT11B.1.351.30.000876
ORF1ab/nsp3916Y916YtaCtaT11B.1.36.160.001425
ORF1ab/nsp3916Y916YtaCtaT11B.1.36.210.00216
ORF1ab/nsp3916Y916YtaCtaT11B.1.36.220.001208
ORF1ab/nsp3916Y916YtaCtaT11B.1.36.80.001
ORF1ab/nsp3916Y916HTacCac11B.1.3910.001127
ORF1ab/nsp3916Y916HTacCac11B.1.3960.000706
ORF1ab/nsp3916Y916HTacCac11B.1.4290.000024
ORF1ab/nsp3916Y916YtaCtaT11B.1.4560.003268
ORF1ab/nsp3916Y916YtaCtaT11B.1.4620.007246
ORF1ab/nsp3916Y916YtaCtaT11B.1.466.20.000391
ORF1ab/nsp3916Y916YtaCtaT11B.1.4700.001404
ORF1ab/nsp3916Y916YtaCtaT11B.1.4820.083333
ORF1ab/nsp3916Y916YtaCtaT11B.1.4970.000315
ORF1ab/nsp3916Y916HTacCac11B.1.4990.00105
ORF1ab/nsp3916Y916YtaCtaT11B.1.5090.000866
ORF1ab/nsp3916Y916CtACtGT11B.1.5260.000024
ORF1ab/nsp3916Y916YtaCtaT11B.1.5550.022222
ORF1ab/nsp3916Y916YtaCtaT11B.1.5670.003333
ORF1ab/nsp3916Y916HTacCac11B.1.5750.000303
ORF1ab/nsp3916Y916FtActTc11B.1.617.20.000004
ORF1ab/nsp3916Y916NTacAac11B.1.617.20.000004
ORF1ab/nsp3916Y916YtaCtaT11B.1.619.10.000641
ORF1ab/nsp3916Y916YtaCtaT11B.1.6320.006711
ORF1ab/nsp3916Y916HTacCac11B.1.6370.000073
ORF1ab/nsp3916Y916delTAC---11B.150.017544
ORF1ab/nsp3916Y916NTacAac11B.550.00295
ORF1ab/nsp3916Y916YtaCtaT11B.6.60.000889
ORF1ab/nsp3916Y916YtaCtaT11C.140.004329
ORF1ab/nsp3916Y916YtaCtaT11C.160.00106
ORF1ab/nsp3916Y916YtaCtaT11C.360.000911
ORF1ab/nsp3916Y916HTacCac11C.370.000116
ORF1ab/nsp3916Y916YtaCtaT11C.37.10.002618
ORF1ab/nsp3916Y916XtaCtaA11D.20.000075
ORF1ab/nsp3916Y916YtaCtaT11P.1.10.000318
ORF1ab/nsp3916Y916YtaCtaT11P.1.100.000269
ORF1ab/nsp3916Y916YtaCtaT11Q.10.000126
ORF1ab/nsp3916Y916FtActTc11Q.80.000165