CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 865 | L865L | L1683L | syn | ctC | ctT | 1611 | 1475 | 0.91558 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865L | L1683L | syn | ctC | ctA | 1611 | 125 | 0.0775916 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865L | L1683L | syn | ctC | ctG | 1611 | 7 | 0.00434513 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865L | L1683L | syn | CtC | TtA | 1611 | 4 | 0.00248293 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865I | L1683I | nonsyn | Ctc | Atc | 1227 | 1177 | 0.95925 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865I | L1683I | nonsyn | CtC | AtA | 1227 | 36 | 0.0293399 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865I | L1683I | nonsyn | CtC | AtT | 1227 | 14 | 0.0114099 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865F | L1683F | nonsyn | Ctc | Ttc | 519 | 517 | 0.996146 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865F | L1683F | nonsyn | CtC | TtT | 519 | 2 | 0.00385356 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865del | L1683del | del | CTC | --- | 57 | 57 | 1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865N | L1683N | nonsyn | CTc | AAc | 22 | 18 | 0.818182 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865N | L1683N | nonsyn | CTC | AAT | 22 | 4 | 0.181818 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865H | L1683H | nonsyn | cTc | cAc | 20 | 18 | 0.9 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865H | L1683H | nonsyn | cTC | cAT | 20 | 2 | 0.1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865K | L1683K | nonsyn | CTC | AAA | 17 | 17 | 1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865Q | L1683Q | nonsyn | cTC | cAA | 16 | 16 | 1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865P | L1683P | nonsyn | cTc | cCc | 9 | 9 | 1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865del1 | L1683del1 | del | cTc | c-c | 8 | 5 | 0.625 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865del1 | L1683del1 | del | ctC | ct- | 8 | 2 | 0.25 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865del1 | L1683del1 | del | Ctc | -tc | 8 | 1 | 0.125 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865M | L1683M | nonsyn | CtC | AtG | 5 | 5 | 1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865Y | L1683Y | nonsyn | CTc | TAc | 4 | 3 | 0.75 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865Y | L1683Y | nonsyn | CTC | TAT | 4 | 1 | 0.25 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865X | L1683X | nonsyn | CTC | TAA | 3 | 3 | 1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865R | L1683R | nonsyn | cTc | cGc | 3 | 2 | 0.666667 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865V | L1683V | nonsyn | Ctc | Gtc | 3 | 2 | 0.666667 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865R | L1683R | nonsyn | cTC | cGT | 3 | 1 | 0.333333 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865V | L1683V | nonsyn | CtC | GtT | 3 | 1 | 0.333333 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865del2 | L1683del2 | del | cTC | c-- | 2 | 2 | 1 | 5312-5314 |
ORF1ab/nsp3 | 865 | L865C | L1683C | nonsyn | CTc | TGc | 1 | 1 | 1 | 5312-5314 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1475 | 1611 | All | 0.000282 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 125 | 1611 | All | 0.000024 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctG | 7 | 1611 | All | 0.000001 |
ORF1ab/nsp3 | 865 | L865L | CtC | TtA | 4 | 1611 | All | 0.000001 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1177 | 1227 | All | 0.000225 |
ORF1ab/nsp3 | 865 | L865I | CtC | AtA | 36 | 1227 | All | 0.000007 |
ORF1ab/nsp3 | 865 | L865I | CtC | AtT | 14 | 1227 | All | 0.000003 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 517 | 519 | All | 0.000099 |
ORF1ab/nsp3 | 865 | L865F | CtC | TtT | 2 | 519 | All | 0 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 472 | 472 | AY.44 | 0.002873 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 279 | 284 | B.1.617.2 | 0.001051 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 5 | 284 | B.1.617.2 | 0.000019 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 226 | 272 | B.1.1.7 | 0.000202 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 41 | 272 | B.1.1.7 | 0.000037 |
ORF1ab/nsp3 | 865 | L865L | CtC | TtA | 4 | 272 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctG | 1 | 272 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 225 | 225 | AY.43 | 0.000997 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 162 | 163 | AY.4 | 0.000252 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 1 | 163 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 83 | 130 | B.1.1.7 | 0.000074 |
ORF1ab/nsp3 | 865 | L865I | CtC | AtA | 34 | 130 | B.1.1.7 | 0.00003 |
ORF1ab/nsp3 | 865 | L865I | CtC | AtT | 13 | 130 | B.1.1.7 | 0.000012 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 127 | 127 | B.1.167 | 0.992188 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 125 | 125 | AY.75 | 0.007003 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 67 | 119 | AY.103 | 0.000416 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 52 | 119 | AY.103 | 0.000323 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 106 | 107 | B.1.1.7 | 0.000095 |
ORF1ab/nsp3 | 865 | L865F | CtC | TtT | 1 | 107 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 66 | 66 | AY.25 | 0.000397 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 64 | 64 | AY.4 | 0.0001 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 57 | 57 | All | 0.000011 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 54 | 54 | B.1.617.2 | 0.000203 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 51 | 51 | AY.26 | 0.001444 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 48 | 48 | AY.20 | 0.001866 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 45 | 45 | AY.118 | 0.002819 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 36 | 36 | AY.102 | 0.000955 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 36 | 36 | AY.3 | 0.000358 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 31 | 33 | AY.44 | 0.000189 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctG | 2 | 33 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 30 | 30 | B.1.177 | 0.000395 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 28 | 28 | AY.9.2 | 0.001028 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 27 | 27 | AY.98.1 | 0.001308 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 26 | 26 | AY.23 | 0.001813 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 25 | 25 | AY.4 | 0.000039 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 24 | 24 | AY.98.1 | 0.001162 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 21 | 23 | B.1.243 | 0.001461 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 2 | 23 | B.1.243 | 0.000139 |
ORF1ab/nsp3 | 865 | L865N | CTc | AAc | 18 | 22 | All | 0.000003 |
ORF1ab/nsp3 | 865 | L865N | CTC | AAT | 4 | 22 | All | 0.000001 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 22 | 22 | AY.53 | 0.006325 |
ORF1ab/nsp3 | 865 | L865N | CTc | AAc | 17 | 21 | B.1.1.7 | 0.000015 |
ORF1ab/nsp3 | 865 | L865N | CTC | AAT | 4 | 21 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 865 | L865H | cTc | cAc | 18 | 20 | All | 0.000003 |
ORF1ab/nsp3 | 865 | L865H | cTC | cAT | 2 | 20 | All | 0 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 19 | 20 | P.1 | 0.000299 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 1 | 20 | P.1 | 0.000016 |
ORF1ab/nsp3 | 865 | L865H | cTc | cAc | 17 | 19 | B.1.1.7 | 0.000015 |
ORF1ab/nsp3 | 865 | L865H | cTC | cAT | 2 | 19 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 19 | 19 | B.1.637 | 0.001388 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 18 | 18 | B.1.1 | 0.000327 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 18 | 18 | B.1.1.7 | 0.000016 |
ORF1ab/nsp3 | 865 | L865K | CTC | AAA | 17 | 17 | All | 0.000003 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 17 | 17 | AY.29 | 0.000268 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 17 | 17 | AY.39 | 0.00042 |
ORF1ab/nsp3 | 865 | L865Q | cTC | cAA | 16 | 16 | All | 0.000003 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 16 | 16 | AY.27 | 0.001036 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 8 | 16 | B.1 | 0.000073 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 7 | 16 | B.1 | 0.000064 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctG | 1 | 16 | B.1 | 0.000009 |
ORF1ab/nsp3 | 865 | L865K | CTC | AAA | 16 | 16 | B.1.1.7 | 0.000014 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 16 | 16 | B.1.617.2 | 0.00006 |
ORF1ab/nsp3 | 865 | L865Q | cTC | cAA | 15 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 15 | 15 | B.1.160 | 0.000468 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 14 | 14 | AY.102 | 0.000371 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 14 | 14 | AY.119 | 0.000494 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 13 | 13 | AY.43 | 0.000058 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 12 | 13 | B.1.2 | 0.000106 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctG | 1 | 13 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 12 | 12 | AY.4.2 | 0.00026 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 11 | 11 | AY.105 | 0.007074 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 11 | 11 | AY.9.2 | 0.000404 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 9 | 10 | AY.3 | 0.00009 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 1 | 10 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 10 | 10 | B.1.36.31 | 0.017513 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 9 | 9 | All | 0.000002 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 9 | 9 | AY.25 | 0.000054 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 9 | 9 | B.1.429 | 0.000212 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 9 | 9 | N.6 | 0.06383 |
ORF1ab/nsp3 | 865 | L865del1 | cTc | c-c | 5 | 8 | All | 0.000001 |
ORF1ab/nsp3 | 865 | L865del1 | ctC | ct- | 2 | 8 | All | 0 |
ORF1ab/nsp3 | 865 | L865del1 | Ctc | -tc | 1 | 8 | All | 0 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 8 | 8 | AY.46.2 | 0.005083 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 8 | 8 | B.1.1.311 | 0.002865 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 7 | 7 | B.1.1.519 | 0.000278 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 7 | 7 | B.1.241 | 0.005682 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 7 | 7 | B.1.526 | 0.000165 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 6 | 6 | AY.101 | 0.002943 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 6 | 6 | AY.111 | 0.001099 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 6 | 6 | AY.4.2.1 | 0.000894 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 5 | 6 | AY.44 | 0.00003 |
ORF1ab/nsp3 | 865 | L865F | CtC | TtT | 1 | 6 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 6 | 6 | AY.46.3 | 0.005602 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 6 | 6 | B.1.1.214 | 0.000333 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 6 | 6 | B.1.177 | 0.000079 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 6 | 6 | B.1.243 | 0.000418 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 6 | 6 | B.1.351 | 0.000178 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 5 | 6 | B.1.429 | 0.000118 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 1 | 6 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 6 | 6 | P.1 | 0.000095 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 5 | 6 | P.1 | 0.000079 |
ORF1ab/nsp3 | 865 | L865I | CtC | AtA | 1 | 6 | P.1 | 0.000016 |
ORF1ab/nsp3 | 865 | L865M | CtC | AtG | 5 | 5 | All | 0.000001 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 5 | 5 | AY.111 | 0.000916 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 5 | 5 | AY.13 | 0.000805 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 5 | 5 | AY.26 | 0.000142 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 5 | 5 | B.1.1.222 | 0.00102 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 5 | 5 | P.1.1 | 0.001588 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 4 | 4 | A.23.1 | 0.002817 |
ORF1ab/nsp3 | 865 | L865Y | CTc | TAc | 3 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 865 | L865Y | CTC | TAT | 1 | 4 | All | 0 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 4 | 4 | AY.106 | 0.00134 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 4 | 4 | AY.20 | 0.000155 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 4 | 4 | AY.61 | 0.000419 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 4 | 4 | B.1.177.82 | 0.001909 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 4 | 4 | B.1.526 | 0.000094 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 4 | 4 | B.1.565 | 0.003241 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 4 | 4 | B.1.621.1 | 0.002023 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 4 | 4 | P.1.15 | 0.000929 |
ORF1ab/nsp3 | 865 | L865X | CTC | TAA | 3 | 3 | All | 0.000001 |
ORF1ab/nsp3 | 865 | L865V | Ctc | Gtc | 2 | 3 | All | 0 |
ORF1ab/nsp3 | 865 | L865R | cTc | cGc | 2 | 3 | All | 0 |
ORF1ab/nsp3 | 865 | L865R | cTC | cGT | 1 | 3 | All | 0 |
ORF1ab/nsp3 | 865 | L865V | CtC | GtT | 1 | 3 | All | 0 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 3 | 3 | B.1.1.203 | 0.050847 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 3 | 3 | B.1.1.519 | 0.000119 |
ORF1ab/nsp3 | 865 | L865X | CTC | TAA | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 865 | L865Y | CTc | TAc | 2 | 3 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 865 | L865Y | CTC | TAT | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 3 | 3 | B.1.177.60 | 0.000655 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 3 | 3 | B.1.177.65 | 0.001996 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 3 | 3 | B.1.177.87 | 0.002183 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp3 | 865 | L865del1 | cTc | c-c | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 865 | L865del2 | cTC | c-- | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp3 | 865 | L865R | cTc | cGc | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 865 | L865R | cTC | cGT | 1 | 2 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | B.1.1.101 | 0.02 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 2 | 2 | B.1.469 | 0.00722 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 865 | L865del1 | cTc | c-c | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | AH.3 | 0.003802 |
ORF1ab/nsp3 | 865 | L865C | CTc | TGc | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 865 | L865V | CtC | GtT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 865 | L865del1 | ctC | ct- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp3 | 865 | L865M | CtC | AtG | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 865 | L865Y | CTc | TAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 865 | L865R | cTc | cGc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.1.109 | 0.04 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.1.142 | 0.017544 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.1.208 | 0.012195 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.1.378 | 0.007299 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.1.380 | 0.009804 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp3 | 865 | L865del1 | Ctc | -tc | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 865 | L865M | CtC | AtG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 865 | L865del2 | cTC | c-- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 865 | L865del1 | ctC | ct- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | B.1.14 | 0.017544 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1.167 | 0.007812 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1.177.48 | 0.003125 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp3 | 865 | L865M | CtC | AtG | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 865 | L865V | Ctc | Gtc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 865 | L865V | Ctc | Gtc | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp3 | 865 | L865C | CTc | TGc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctG | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 865 | L865M | CtC | AtG | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.487 | 0.019608 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp3 | 865 | L865I | CtC | AtA | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 865 | L865I | CtC | AtT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 865 | L865del1 | cTc | c-c | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 865 | L865del2 | cTC | c-- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | B.15 | 0.017544 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctG | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp3 | 865 | L865M | CtC | AtG | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp3 | 865 | L865I | Ctc | Atc | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp3 | 865 | L865P | cTc | cCc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 865 | L865K | CTC | AAA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 865 | L865H | cTc | cAc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 865 | L865Q | cTC | cAA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 865 | L865N | CTc | AAc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctA | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | P.7 | 0.004367 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp3 | 865 | L865F | Ctc | Ttc | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp3 | 865 | L865del | CTC | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp3 | 865 | L865L | ctC | ctT | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|