CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 864

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3864T864IT1682InonsynaCaaTa963296280.9995855309-5311
ORF1ab/nsp3864T864IT1682InonsynaCAaTT963240.0004152825309-5311
ORF1ab/nsp3864T864AT1682AnonsynAcaGca34934915309-5311
ORF1ab/nsp3864T864TT1682TsynacAacG2592290.884175309-5311
ORF1ab/nsp3864T864TT1682TsynacAacT259170.06563715309-5311
ORF1ab/nsp3864T864TT1682TsynacAacC259130.0501935309-5311
ORF1ab/nsp3864T864delT1682deldelACA---585815309-5311
ORF1ab/nsp3864T864KT1682KnonsynaCaaAa363615309-5311
ORF1ab/nsp3864T864NT1682NnonsynaCAaAT191915309-5311
ORF1ab/nsp3864T864ST1682SnonsynAcaTca740.5714295309-5311
ORF1ab/nsp3864T864ST1682SnonsynAcATcT730.4285715309-5311
ORF1ab/nsp3864T864PT1682PnonsynAcaCca3315309-5311
ORF1ab/nsp3864T864LT1682LnonsynACaTTa2215309-5311
ORF1ab/nsp3864T864FT1682FnonsynACATTT2215309-5311
ORF1ab/nsp3864T864YT1682YnonsynACATAT2215309-5311
ORF1ab/nsp3864T864del2T1682del2delACa--a2215309-5311
ORF1ab/nsp3864T864XT1682XnonsynACaTAa2215309-5311
ORF1ab/nsp3864T864MT1682MnonsynaCAaTG1115309-5311

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3864T864IaCaaTa96289632All0.001841
ORF1ab/nsp3864T864IaCAaTT49632All0.000001
ORF1ab/nsp3864T864IaCaaTa42424246B.1.1.70.003798
ORF1ab/nsp3864T864IaCAaTT44246B.1.1.70.000004
ORF1ab/nsp3864T864IaCaaTa13301330AY.40.00207
ORF1ab/nsp3864T864IaCaaTa587587B.1.2430.040846
ORF1ab/nsp3864T864AAcaGca349349All0.000067
ORF1ab/nsp3864T864IaCaaTa276276AY.250.00166
ORF1ab/nsp3864T864TacAacG229259All0.000044
ORF1ab/nsp3864T864TacAacT17259All0.000003
ORF1ab/nsp3864T864TacAacC13259All0.000002
ORF1ab/nsp3864T864IaCaaTa215215AY.1200.007993
ORF1ab/nsp3864T864AAcaGca194194B.1.1.70.000174
ORF1ab/nsp3864T864IaCaaTa184184B.1.617.20.000693
ORF1ab/nsp3864T864IaCaaTa159159B.1.20.0014
ORF1ab/nsp3864T864IaCaaTa155155AY.30.001542
ORF1ab/nsp3864T864IaCaaTa144144B.1.2650.182973
ORF1ab/nsp3864T864IaCaaTa114114B.10.001044
ORF1ab/nsp3864T864IaCaaTa8888AY.1030.000546
ORF1ab/nsp3864T864IaCaaTa8585P.10.001339
ORF1ab/nsp3864T864IaCaaTa8282AY.430.000363
ORF1ab/nsp3864T864IaCaaTa8282P.1.100.022096
ORF1ab/nsp3864T864TacAacG7980B.1.2430.005497
ORF1ab/nsp3864T864TacAacC180B.1.2430.00007
ORF1ab/nsp3864T864IaCaaTa6666AY.440.000402
ORF1ab/nsp3864T864IaCaaTa6565B.1.6020.424837
ORF1ab/nsp3864T864IaCaaTa6262AY.4.2.10.009237
ORF1ab/nsp3864T864IaCaaTa6060AY.4.50.00645
ORF1ab/nsp3864T864IaCaaTa5959AY.46.40.009706
ORF1ab/nsp3864T864delACA---5858All0.000011
ORF1ab/nsp3864T864IaCaaTa5555B.1.10.000998
ORF1ab/nsp3864T864IaCaaTa5050B.1.2340.006597
ORF1ab/nsp3864T864IaCaaTa5050B.1.4270.002525
ORF1ab/nsp3864T864IaCaaTa4949Q.80.00808
ORF1ab/nsp3864T864IaCaaTa4646AY.390.001137
ORF1ab/nsp3864T864IaCaaTa4343B.1.3041
ORF1ab/nsp3864T864IaCaaTa4040B.1.1770.000527
ORF1ab/nsp3864T864IaCaaTa3838AY.1020.001008
ORF1ab/nsp3864T864IaCaaTa3838AY.60.001563
ORF1ab/nsp3864T864KaCaaAa3636All0.000007
ORF1ab/nsp3864T864IaCaaTa3636B.280.118033
ORF1ab/nsp3864T864IaCaaTa3535B.1.2580.002329
ORF1ab/nsp3864T864IaCaaTa3434B.1.4290.0008
ORF1ab/nsp3864T864IaCaaTa3434B.1.6210.00301
ORF1ab/nsp3864T864IaCaaTa3333AY.50.000681
ORF1ab/nsp3864T864IaCaaTa3232AY.3.10.002728
ORF1ab/nsp3864T864IaCaaTa3232AY.420.001287
ORF1ab/nsp3864T864TacAacG3232B.1.1.3521
ORF1ab/nsp3864T864KaCaaAa3232B.1.1.70.000029
ORF1ab/nsp3864T864IaCaaTa3232B.1.3990.061896
ORF1ab/nsp3864T864IaCaaTa3131AY.1190.001095
ORF1ab/nsp3864T864IaCaaTa2727B.1.3110.007414
ORF1ab/nsp3864T864IaCaaTa2727B.1.438.10.002896
ORF1ab/nsp3864T864IaCaaTa2626B.1.1.4200.026157
ORF1ab/nsp3864T864IaCaaTa2323B.1.1600.000717
ORF1ab/nsp3864T864IaCaaTa2222AY.200.000855
ORF1ab/nsp3864T864TacAacG1022B.1.1.70.000009
ORF1ab/nsp3864T864TacAacT922B.1.1.70.000008
ORF1ab/nsp3864T864TacAacC322B.1.1.70.000003
ORF1ab/nsp3864T864AAcaGca2222B.1.2340.002903
ORF1ab/nsp3864T864AAcaGca2121B.10.000192
ORF1ab/nsp3864T864TacAacG2020AY.250.00012
ORF1ab/nsp3864T864NaCAaAT1919All0.000004
ORF1ab/nsp3864T864delACA---1919B.1.1.70.000017
ORF1ab/nsp3864T864AAcaGca1818AY.30.000179
ORF1ab/nsp3864T864AAcaGca1818AY.440.00011
ORF1ab/nsp3864T864IaCaaTa1818AY.98.10.000872
ORF1ab/nsp3864T864IaCaaTa1616B.1.1.2160.014248
ORF1ab/nsp3864T864IaCaaTa1616B.1.360.002334
ORF1ab/nsp3864T864IaCaaTa1616B.1.5950.004175
ORF1ab/nsp3864T864IaCaaTa1515AY.99.20.001382
ORF1ab/nsp3864T864IaCaaTa1515B.1.6280.005285
ORF1ab/nsp3864T864IaCaaTa1414AY.750.000784
ORF1ab/nsp3864T864IaCaaTa1414B.1.3510.000416
ORF1ab/nsp3864T864IaCaaTa1313AY.230.000907
ORF1ab/nsp3864T864IaCaaTa1313AY.330.000868
ORF1ab/nsp3864T864IaCaaTa1313AY.340.001261
ORF1ab/nsp3864T864IaCaaTa1313AY.80.007879
ORF1ab/nsp3864T864TacAacG1213B.1.10.000218
ORF1ab/nsp3864T864TacAacC113B.1.10.000018
ORF1ab/nsp3864T864TacAacG1012B.10.000092
ORF1ab/nsp3864T864TacAacT112B.10.000009
ORF1ab/nsp3864T864TacAacC112B.10.000009
ORF1ab/nsp3864T864IaCaaTa1212B.1.5260.000282
ORF1ab/nsp3864T864TacAacG1112P.10.000173
ORF1ab/nsp3864T864TacAacT112P.10.000016
ORF1ab/nsp3864T864IaCaaTa1111B.1.177.460.010101
ORF1ab/nsp3864T864IaCaaTa1111B.1.5250.001245
ORF1ab/nsp3864T864AAcaGca1111B.1.617.10.001419
ORF1ab/nsp3864T864IaCaaTa1010AY.1000.00046
ORF1ab/nsp3864T864IaCaaTa1010Q.30.00145
ORF1ab/nsp3864T864IaCaaTa99AY.120.2.10.004484
ORF1ab/nsp3864T864IaCaaTa99AY.770.010147
ORF1ab/nsp3864T864IaCaaTa99B.1.1.2140.000499
ORF1ab/nsp3864T864IaCaaTa99B.1.1.3060.003946
ORF1ab/nsp3864T864TacAacG99B.1.5960.000784
ORF1ab/nsp3864T864IaCaaTa99B.1.6270.018182
ORF1ab/nsp3864T864IaCaaTa99C.370.001045
ORF1ab/nsp3864T864IaCaaTa99V.10.204545
ORF1ab/nsp3864T864IaCaaTa88AY.300.003166
ORF1ab/nsp3864T864NaCAaAT88AY.610.000838
ORF1ab/nsp3864T864IaCaaTa88B.1.1.330.003367
ORF1ab/nsp3864T864IaCaaTa88B.1.1.5190.000318
ORF1ab/nsp3864T864IaCaaTa88B.1.4000.003432
ORF1ab/nsp3864T864SAcaTca47All0.000001
ORF1ab/nsp3864T864SAcATcT37All0.000001
ORF1ab/nsp3864T864IaCaaTa77AY.270.000453
ORF1ab/nsp3864T864AAcaGca77AY.40.000011
ORF1ab/nsp3864T864IaCaaTa77AY.4.20.000152
ORF1ab/nsp3864T864SAcaTca47B.1.1.70.000004
ORF1ab/nsp3864T864SAcATcT37B.1.1.70.000003
ORF1ab/nsp3864T864IaCaaTa77B.1.5240.009845
ORF1ab/nsp3864T864IaCaaTa77B.1.6360.04698
ORF1ab/nsp3864T864IaCaaTa77D.20.000525
ORF1ab/nsp3864T864IaCaaTa77P.1.70.002235
ORF1ab/nsp3864T864IaCaaTa66AY.260.00017
ORF1ab/nsp3864T864TacAacG66AY.30.00006
ORF1ab/nsp3864T864TacAacC66B.1.177.810.001136
ORF1ab/nsp3864T864AAcaGca66B.1.20.000053
ORF1ab/nsp3864T864IaCaaTa66B.1.2210.000426
ORF1ab/nsp3864T864IaCaaTa66B.1.3240.009631
ORF1ab/nsp3864T864IaCaaTa66B.1.6090.002876
ORF1ab/nsp3864T864IaCaaTa66B.1.621.10.003035
ORF1ab/nsp3864T864IaCaaTa66B.1.6230.003219
ORF1ab/nsp3864T864IaCaaTa55AY.1140.001156
ORF1ab/nsp3864T864IaCaaTa55AY.1180.000313
ORF1ab/nsp3864T864IaCaaTa55AY.140.00044
ORF1ab/nsp3864T864IaCaaTa55AY.290.000079
ORF1ab/nsp3864T864IaCaaTa55AY.39.10.000198
ORF1ab/nsp3864T864IaCaaTa55AY.90.000338
ORF1ab/nsp3864T864TacAacG55B.1.1.2140.000277
ORF1ab/nsp3864T864IaCaaTa55B.1.1.280.001556
ORF1ab/nsp3864T864IaCaaTa55B.1.1.4160.004525
ORF1ab/nsp3864T864NaCAaAT55B.1.617.20.000019
ORF1ab/nsp3864T864IaCaaTa55P.1.140.000239
ORF1ab/nsp3864T864IaCaaTa44AY.1210.000541
ORF1ab/nsp3864T864IaCaaTa44AY.130.000644
ORF1ab/nsp3864T864TacAacG44AY.3.10.000341
ORF1ab/nsp3864T864IaCaaTa44AY.360.000593
ORF1ab/nsp3864T864delACA---44AY.40.000006
ORF1ab/nsp3864T864IaCaaTa44AY.46.60.000289
ORF1ab/nsp3864T864IaCaaTa44AY.75.10.000721
ORF1ab/nsp3864T864IaCaaTa44B0.000511
ORF1ab/nsp3864T864AAcaGca44B.1.1.2310.012384
ORF1ab/nsp3864T864NaCAaAT44B.1.1.70.000004
ORF1ab/nsp3864T864TacAacG44B.1.1.830.01084
ORF1ab/nsp3864T864IaCaaTa44B.1.1390.002933
ORF1ab/nsp3864T864TacAacG44B.1.3510.000119
ORF1ab/nsp3864T864IaCaaTa44B.1.3690.001141
ORF1ab/nsp3864T864IaCaaTa44B.1.4090.003125
ORF1ab/nsp3864T864IaCaaTa44B.1.4210.029851
ORF1ab/nsp3864T864IaCaaTa44B.1.5770.002749
ORF1ab/nsp3864T864IaCaaTa44B.1.5960.000349
ORF1ab/nsp3864T864AAcaGca44B.1.617.20.000015
ORF1ab/nsp3864T864AAcaGca44C.1.20.017021
ORF1ab/nsp3864T864IaCaaTa44P.20.000747
ORF1ab/nsp3864T864IaCaaTa44Q.10.000505
ORF1ab/nsp3864T864IaCaaTa33A0.001161
ORF1ab/nsp3864T864IaCaaTa33A.2.50.001497
ORF1ab/nsp3864T864PAcaCca33All0.000001
ORF1ab/nsp3864T864IaCaaTa33AW.10.009146
ORF1ab/nsp3864T864IaCaaTa33AY.1110.000549
ORF1ab/nsp3864T864IaCaaTa33AY.1160.00086
ORF1ab/nsp3864T864IaCaaTa33AY.1170.000254
ORF1ab/nsp3864T864AAcaGca33AY.320.001597
ORF1ab/nsp3864T864IaCaaTa33AY.410.000882
ORF1ab/nsp3864T864TacAacG23AY.440.000012
ORF1ab/nsp3864T864TacAacT13AY.440.000006
ORF1ab/nsp3864T864IaCaaTa33AY.450.000365
ORF1ab/nsp3864T864IaCaaTa33AY.9.10.000251
ORF1ab/nsp3864T864delACA---33B.10.000027
ORF1ab/nsp3864T864IaCaaTa33B.1.1.2220.000612
ORF1ab/nsp3864T864AAcaGca33B.1.1770.00004
ORF1ab/nsp3864T864IaCaaTa33B.1.177.210.000229
ORF1ab/nsp3864T864IaCaaTa33B.1.177.480.009375
ORF1ab/nsp3864T864IaCaaTa33B.1.177.860.00055
ORF1ab/nsp3864T864AAcaGca33B.1.258.140.002941
ORF1ab/nsp3864T864IaCaaTa33B.1.2980.006342
ORF1ab/nsp3864T864IaCaaTa33B.1.4700.004213
ORF1ab/nsp3864T864IaCaaTa33B.1.5610.001191
ORF1ab/nsp3864T864IaCaaTa33B.1.5920.12
ORF1ab/nsp3864T864TacAacG33B.1.617.20.000011
ORF1ab/nsp3864T864IaCaaTa33B.1.6370.000219
ORF1ab/nsp3864T864IaCaaTa33C.160.003181
ORF1ab/nsp3864T864IaCaaTa33L.20.034091
ORF1ab/nsp3864T864AAcaGca33P.10.000047
ORF1ab/nsp3864T864IaCaaTa33P.1.150.000697
ORF1ab/nsp3864T864IaCaaTa33P.1.160.001122
ORF1ab/nsp3864T864IaCaaTa33R.10.00027
ORF1ab/nsp3864T864delACA---220.111111
ORF1ab/nsp3864T864del2ACa--a22All0
ORF1ab/nsp3864T864FACATTT22All0
ORF1ab/nsp3864T864LACaTTa22All0
ORF1ab/nsp3864T864XACaTAa22All0
ORF1ab/nsp3864T864YACATAT22All0
ORF1ab/nsp3864T864TacAacG22AY.1020.000053
ORF1ab/nsp3864T864AAcaGca22AY.1030.000012
ORF1ab/nsp3864T864IaCaaTa22AY.1130.000285
ORF1ab/nsp3864T864IaCaaTa22AY.120.20.002571
ORF1ab/nsp3864T864IaCaaTa22AY.240.000862
ORF1ab/nsp3864T864AAcaGca22AY.250.000012
ORF1ab/nsp3864T864IaCaaTa22AY.34.10.00102
ORF1ab/nsp3864T864AAcaGca22AY.430.000009
ORF1ab/nsp3864T864delACA---22AY.430.000009
ORF1ab/nsp3864T864IaCaaTa22AY.460.000208
ORF1ab/nsp3864T864IaCaaTa22AY.46.50.000397
ORF1ab/nsp3864T864IaCaaTa22AY.470.000062
ORF1ab/nsp3864T864TacAacG22AY.50.000041
ORF1ab/nsp3864T864IaCaaTa22AY.520.001629
ORF1ab/nsp3864T864IaCaaTa22AY.580.001815
ORF1ab/nsp3864T864IaCaaTa22AY.700.000417
ORF1ab/nsp3864T864IaCaaTa22AY.850.000854
ORF1ab/nsp3864T864IaCaaTa22AY.870.001665
ORF1ab/nsp3864T864IaCaaTa22AY.9.20.000073
ORF1ab/nsp3864T864IaCaaTa22AY.950.001522
ORF1ab/nsp3864T864KaCaaAa22B.1.10.000036
ORF1ab/nsp3864T864IaCaaTa22B.1.1.2100.011429
ORF1ab/nsp3864T864IaCaaTa22B.1.1.2840.000215
ORF1ab/nsp3864T864IaCaaTa22B.1.1.3720.001377
ORF1ab/nsp3864T864IaCaaTa22B.1.1.390.001019
ORF1ab/nsp3864T864TacAacG22B.1.1.4200.002012
ORF1ab/nsp3864T864IaCaaTa22B.1.1.4340.000697
ORF1ab/nsp3864T864IaCaaTa22B.1.1.500.001358
ORF1ab/nsp3864T864IaCaaTa22B.1.1.5230.003125
ORF1ab/nsp3864T864IaCaaTa22B.1.1.630.000772
ORF1ab/nsp3864T864FACATTT22B.1.1.70.000002
ORF1ab/nsp3864T864LACaTTa22B.1.1.70.000002
ORF1ab/nsp3864T864YACATAT22B.1.1.70.000002
ORF1ab/nsp3864T864XACaTAa22B.1.1.70.000002
ORF1ab/nsp3864T864IaCaaTa22B.1.110.30.001437
ORF1ab/nsp3864T864IaCaaTa22B.1.177.600.000437
ORF1ab/nsp3864T864IaCaaTa22B.1.177.770.001452
ORF1ab/nsp3864T864IaCaaTa22B.1.177.810.000379
ORF1ab/nsp3864T864delACA---22B.1.360.000292
ORF1ab/nsp3864T864IaCaaTa22B.1.36.160.002849
ORF1ab/nsp3864T864IaCaaTa22B.1.36.180.00084
ORF1ab/nsp3864T864IaCaaTa22B.1.36.290.001035
ORF1ab/nsp3864T864IaCaaTa22B.1.36.80.002
ORF1ab/nsp3864T864IaCaaTa22B.1.4320.022472
ORF1ab/nsp3864T864IaCaaTa22B.1.5010.014706
ORF1ab/nsp3864T864AAcaGca22B.1.5250.000226
ORF1ab/nsp3864T864IaCaaTa22B.1.5450.028986
ORF1ab/nsp3864T864IaCaaTa22B.1.5640.000852
ORF1ab/nsp3864T864IaCaaTa22B.1.5650.001621
ORF1ab/nsp3864T864IaCaaTa22B.1.5740.004301
ORF1ab/nsp3864T864delACA---22B.1.617.20.000008
ORF1ab/nsp3864T864IaCaaTa22B.290.007018
ORF1ab/nsp3864T864IaCaaTa22B.400.000729
ORF1ab/nsp3864T864IaCaaTa22Q.40.00091
ORF1ab/nsp3864T864PAcaCca11A0.000387
ORF1ab/nsp3864T864TacAacT11A0.000387
ORF1ab/nsp3864T864AAcaGca11A0.000387
ORF1ab/nsp3864T864delACA---11A.2.20.001689
ORF1ab/nsp3864T864IaCaaTa11A.210.00277
ORF1ab/nsp3864T864delACA---11AH.30.003802
ORF1ab/nsp3864T864MaCAaTG11All0
ORF1ab/nsp3864T864IaCaaTa11AU.30.00211
ORF1ab/nsp3864T864IaCaaTa11AY.10.000396
ORF1ab/nsp3864T864IaCaaTa11AY.1010.00049
ORF1ab/nsp3864T864IaCaaTa11AY.1060.000335
ORF1ab/nsp3864T864delACA---11AY.1080.001103
ORF1ab/nsp3864T864IaCaaTa11AY.1080.001103
ORF1ab/nsp3864T864TacAacT11AY.1090.00074
ORF1ab/nsp3864T864IaCaaTa11AY.1090.00074
ORF1ab/nsp3864T864NaCAaAT11AY.1180.000063
ORF1ab/nsp3864T864AAcaGca11AY.1190.000035
ORF1ab/nsp3864T864IaCaaTa11AY.120.000316
ORF1ab/nsp3864T864delACA---11AY.1200.000037
ORF1ab/nsp3864T864AAcaGca11AY.1200.000037
ORF1ab/nsp3864T864TacAacG11AY.140.000088
ORF1ab/nsp3864T864AAcaGca11AY.200.000039
ORF1ab/nsp3864T864AAcaGca11AY.230.00007
ORF1ab/nsp3864T864TacAacT11AY.260.000028
ORF1ab/nsp3864T864AAcaGca11AY.260.000028
ORF1ab/nsp3864T864AAcaGca11AY.3.10.000085
ORF1ab/nsp3864T864TacAacG11AY.340.000097
ORF1ab/nsp3864T864IaCaaTa11AY.370.000316
ORF1ab/nsp3864T864TacAacG11AY.380.000499
ORF1ab/nsp3864T864delACA---11AY.390.000025
ORF1ab/nsp3864T864AAcaGca11AY.390.000025
ORF1ab/nsp3864T864TacAacT11AY.40.000002
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ORF1ab/nsp3864T864AAcaGca11AY.4.20.000022
ORF1ab/nsp3864T864MaCAaTG11AY.4.2.10.000149
ORF1ab/nsp3864T864IaCaaTa11AY.4.30.000842
ORF1ab/nsp3864T864IaCaaTa11AY.46.20.000635
ORF1ab/nsp3864T864AAcaGca11AY.470.000031
ORF1ab/nsp3864T864AAcaGca11AY.50.000021
ORF1ab/nsp3864T864IaCaaTa11AY.540.000095
ORF1ab/nsp3864T864IaCaaTa11AY.610.000105
ORF1ab/nsp3864T864IaCaaTa11AY.620.000436
ORF1ab/nsp3864T864IaCaaTa11AY.650.000533
ORF1ab/nsp3864T864delACA---11AY.660.00107
ORF1ab/nsp3864T864IaCaaTa11AY.670.000464
ORF1ab/nsp3864T864IaCaaTa11AY.680.000274
ORF1ab/nsp3864T864IaCaaTa11AY.7.10.000113
ORF1ab/nsp3864T864IaCaaTa11AY.710.000475
ORF1ab/nsp3864T864TacAacG11AY.750.000056
ORF1ab/nsp3864T864delACA---11AY.750.000056
ORF1ab/nsp3864T864IaCaaTa11AY.790.001211
ORF1ab/nsp3864T864IaCaaTa11AY.800.001129
ORF1ab/nsp3864T864AAcaGca11AY.9.20.000037
ORF1ab/nsp3864T864IaCaaTa11AY.980.000079
ORF1ab/nsp3864T864PAcaCca11B.10.000009
ORF1ab/nsp3864T864delACA---11B.1.10.000018
ORF1ab/nsp3864T864AAcaGca11B.1.1.10.000327
ORF1ab/nsp3864T864delACA---11B.1.1.10.000327
ORF1ab/nsp3864T864IaCaaTa11B.1.1.1110.014706
ORF1ab/nsp3864T864IaCaaTa11B.1.1.1210.002427
ORF1ab/nsp3864T864delACA---11B.1.1.1420.017544
ORF1ab/nsp3864T864IaCaaTa11B.1.1.1760.000439
ORF1ab/nsp3864T864IaCaaTa11B.1.1.1860.003436
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2300.009174
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2320.001815
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2410.00207
ORF1ab/nsp3864T864AAcaGca11B.1.1.250.000569
ORF1ab/nsp3864T864IaCaaTa11B.1.1.250.000569
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2630.001558
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2690.001353
ORF1ab/nsp3864T864TacAacG11B.1.1.270.00565
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2750.011236
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2790.001121
ORF1ab/nsp3864T864IaCaaTa11B.1.1.2940.001266
ORF1ab/nsp3864T864TacAacG11B.1.1.3060.000438
ORF1ab/nsp3864T864IaCaaTa11B.1.1.3110.000358
ORF1ab/nsp3864T864IaCaaTa11B.1.1.3120.001912
ORF1ab/nsp3864T864IaCaaTa11B.1.1.3170.000412
ORF1ab/nsp3864T864IaCaaTa11B.1.1.3590.027778
ORF1ab/nsp3864T864IaCaaTa11B.1.1.3690.000446
ORF1ab/nsp3864T864IaCaaTa11B.1.1.370.000193
ORF1ab/nsp3864T864IaCaaTa11B.1.1.3980.003226
ORF1ab/nsp3864T864IaCaaTa11B.1.1.4020.011111
ORF1ab/nsp3864T864delACA---11B.1.1.4200.001006
ORF1ab/nsp3864T864IaCaaTa11B.1.1.4320.001266
ORF1ab/nsp3864T864del2ACa--a11B.1.1.5190.00004
ORF1ab/nsp3864T864TacAacG11B.1.1.5260.003546
ORF1ab/nsp3864T864PAcaCca11B.1.1.70.000001
ORF1ab/nsp3864T864del2ACa--a11B.1.1.70.000001
ORF1ab/nsp3864T864IaCaaTa11B.1.1.700.000341
ORF1ab/nsp3864T864AAcaGca11B.1.1.830.00271
ORF1ab/nsp3864T864IaCaaTa11B.1.1100.004525
ORF1ab/nsp3864T864IaCaaTa11B.1.1310.008772
ORF1ab/nsp3864T864IaCaaTa11B.1.1470.000756
ORF1ab/nsp3864T864IaCaaTa11B.1.160.180.007299
ORF1ab/nsp3864T864delACA---11B.1.1770.000013
ORF1ab/nsp3864T864TacAacG11B.1.1770.000013
ORF1ab/nsp3864T864KaCaaAa11B.1.1770.000013
ORF1ab/nsp3864T864IaCaaTa11B.1.177.160.000664
ORF1ab/nsp3864T864delACA---11B.1.177.160.000664
ORF1ab/nsp3864T864delACA---11B.1.177.170.000821
ORF1ab/nsp3864T864IaCaaTa11B.1.177.180.00116
ORF1ab/nsp3864T864delACA---11B.1.177.180.00116
ORF1ab/nsp3864T864IaCaaTa11B.1.177.330.001645
ORF1ab/nsp3864T864IaCaaTa11B.1.177.500.004695
ORF1ab/nsp3864T864IaCaaTa11B.1.177.540.000606
ORF1ab/nsp3864T864delACA---11B.1.177.570.000281
ORF1ab/nsp3864T864delACA---11B.1.177.70.000165
ORF1ab/nsp3864T864IaCaaTa11B.1.177.70.000165
ORF1ab/nsp3864T864delACA---11B.1.177.760.002494
ORF1ab/nsp3864T864IaCaaTa11B.1.177.840.006667
ORF1ab/nsp3864T864IaCaaTa11B.1.177.870.000728
ORF1ab/nsp3864T864AAcaGca11B.1.214.20.0006
ORF1ab/nsp3864T864IaCaaTa11B.1.2470.014925
ORF1ab/nsp3864T864TacAacG11B.1.2580.000067
ORF1ab/nsp3864T864IaCaaTa11B.1.258.120.007874
ORF1ab/nsp3864T864IaCaaTa11B.1.2930.0125
ORF1ab/nsp3864T864delACA---11B.1.3190.003049
ORF1ab/nsp3864T864IaCaaTa11B.1.3440.008197
ORF1ab/nsp3864T864IaCaaTa11B.1.3490.000715
ORF1ab/nsp3864T864IaCaaTa11B.1.36.170.000494
ORF1ab/nsp3864T864IaCaaTa11B.1.36.250.002208
ORF1ab/nsp3864T864IaCaaTa11B.1.36.70.004
ORF1ab/nsp3864T864IaCaaTa11B.1.36.90.003215
ORF1ab/nsp3864T864IaCaaTa11B.1.362.20.004717
ORF1ab/nsp3864T864IaCaaTa11B.1.3670.000792
ORF1ab/nsp3864T864IaCaaTa11B.1.3800.006623
ORF1ab/nsp3864T864delACA---11B.1.416.10.001563
ORF1ab/nsp3864T864IaCaaTa11B.1.4280.00102
ORF1ab/nsp3864T864AAcaGca11B.1.438.10.000107
ORF1ab/nsp3864T864IaCaaTa11B.1.4530.003236
ORF1ab/nsp3864T864AAcaGca11B.1.5260.000024
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ORF1ab/nsp3864T864IaCaaTa11B.1.5750.000303
ORF1ab/nsp3864T864TacAacT11B.1.5770.000687
ORF1ab/nsp3864T864IaCaaTa11B.1.5800.004065
ORF1ab/nsp3864T864IaCaaTa11B.1.5820.000491
ORF1ab/nsp3864T864IaCaaTa11B.1.5880.00091
ORF1ab/nsp3864T864IaCaaTa11B.1.617.10.000129
ORF1ab/nsp3864T864IaCaaTa11B.1.6180.004032
ORF1ab/nsp3864T864IaCaaTa11B.1.6190.000871
ORF1ab/nsp3864T864delACA---11B.1.6210.000089
ORF1ab/nsp3864T864delACA---11B.1.6300.005236
ORF1ab/nsp3864T864IaCaaTa11B.1.6390.021739
ORF1ab/nsp3864T864IaCaaTa11B.1.760.011364
ORF1ab/nsp3864T864delACA---11B.150.017544
ORF1ab/nsp3864T864AAcaGca11B.30.000831
ORF1ab/nsp3864T864IaCaaTa11B.40.002208
ORF1ab/nsp3864T864IaCaaTa11C.170.055556
ORF1ab/nsp3864T864IaCaaTa11C.300.001727
ORF1ab/nsp3864T864AAcaGca11C.36.3.10.002717
ORF1ab/nsp3864T864TacAacC11D.20.000075
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ORF1ab/nsp3864T864NaCAaAT11P.10.000016
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ORF1ab/nsp3864T864TacAacG11P.1.120.000484
ORF1ab/nsp3864T864IaCaaTa11P.1.130.000898
ORF1ab/nsp3864T864TacAacG11P.1.170.000162
ORF1ab/nsp3864T864IaCaaTa11P.1.80.004785
ORF1ab/nsp3864T864IaCaaTa11Q.60.006623
ORF1ab/nsp3864T864delACA---11Q.80.000165