CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 861 & Codon = gTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3861A861VA1679VnonsyngCagTa5620562015300-5302

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3861A861VgCagTa56205620All0.001075
ORF1ab/nsp3861A861VgCagTa12441244B.1.1.70.001114
ORF1ab/nsp3861A861VgCagTa674674AY.200.026195
ORF1ab/nsp3861A861VgCagTa469469AY.250.002821
ORF1ab/nsp3861A861VgCagTa301301AY.40.000468
ORF1ab/nsp3861A861VgCagTa170170AY.60.006992
ORF1ab/nsp3861A861VgCagTa169169AY.440.001029
ORF1ab/nsp3861A861VgCagTa160160B.1.1.1380.969697
ORF1ab/nsp3861A861VgCagTa152152B.1.1770.002001
ORF1ab/nsp3861A861VgCagTa149149B.1.617.20.000561
ORF1ab/nsp3861A861VgCagTa130130B.1.4210.970149
ORF1ab/nsp3861A861VgCagTa126126AY.1200.004685
ORF1ab/nsp3861A861VgCagTa9393B.1.20.000819
ORF1ab/nsp3861A861VgCagTa8989B.10.000815
ORF1ab/nsp3861A861VgCagTa8989B.1.2400.019185
ORF1ab/nsp3861A861VgCagTa8282AY.430.000363
ORF1ab/nsp3861A861VgCagTa7777AY.1030.000478
ORF1ab/nsp3861A861VgCagTa7676B.1.360.011088
ORF1ab/nsp3861A861VgCagTa7070B.1.4290.001647
ORF1ab/nsp3861A861VgCagTa5656AY.30.000557
ORF1ab/nsp3861A861VgCagTa5353AY.390.00131
ORF1ab/nsp3861A861VgCagTa4545B.1.10.000816
ORF1ab/nsp3861A861VgCagTa4444B.1.5260.001034
ORF1ab/nsp3861A861VgCagTa4040P.10.00063
ORF1ab/nsp3861A861VgCagTa3939B.1.258.20.175676
ORF1ab/nsp3861A861VgCagTa3434B.1.1600.00106
ORF1ab/nsp3861A861VgCagTa3333AY.750.001849
ORF1ab/nsp3861A861VgCagTa3131B.1.1.700.010573
ORF1ab/nsp3861A861VgCagTa3030AY.290.000473
ORF1ab/nsp3861A861VgCagTa2828B.1.3960.01976
ORF1ab/nsp3861A861VgCagTa2626AY.420.001046
ORF1ab/nsp3861A861VgCagTa2626B.1.6210.002301
ORF1ab/nsp3861A861VgCagTa2525AY.98.10.001211
ORF1ab/nsp3861A861VgCagTa2525B.1.4700.035112
ORF1ab/nsp3861A861VgCagTa2323B.1.1.2770.017451
ORF1ab/nsp3861A861VgCagTa2222AY.4.20.000477
ORF1ab/nsp3861A861VgCagTa1919B.1.36.290.009829
ORF1ab/nsp3861A861VgCagTa1818AY.1190.000636
ORF1ab/nsp3861A861VgCagTa1818B.1.2100.03838
ORF1ab/nsp3861A861VgCagTa1818B.1.2210.001279
ORF1ab/nsp3861A861VgCagTa1616AY.1000.000736
ORF1ab/nsp3861A861VgCagTa1616AY.1170.001352
ORF1ab/nsp3861A861VgCagTa1515C.370.001741
ORF1ab/nsp3861A861VgCagTa1313AY.1180.000814
ORF1ab/nsp3861A861VgCagTa1313AY.460.001353
ORF1ab/nsp3861A861VgCagTa1212AY.1130.001709
ORF1ab/nsp3861A861VgCagTa1212B.1.1.4060.077922
ORF1ab/nsp3861A861VgCagTa1212C.360.010929
ORF1ab/nsp3861A861VgCagTa1111B.1.177.820.005251
ORF1ab/nsp3861A861VgCagTa1111B.1.438.10.00118
ORF1ab/nsp3861A861VgCagTa1010AY.330.000668
ORF1ab/nsp3861A861VgCagTa1010B.1.1.5190.000397
ORF1ab/nsp3861A861VgCagTa1010B.1.160.160.009294
ORF1ab/nsp3861A861VgCagTa1010B.1.4560.03268
ORF1ab/nsp3861A861VgCagTa99AY.260.000255
ORF1ab/nsp3861A861VgCagTa99AY.610.000943
ORF1ab/nsp3861A861VgCagTa99B.1.1260.01148
ORF1ab/nsp3861A861VgCagTa99B.1.3510.000268
ORF1ab/nsp3861A861VgCagTa99C.160.009544
ORF1ab/nsp3861A861VgCagTa88AA.10.057971
ORF1ab/nsp3861A861VgCagTa88AY.140.000704
ORF1ab/nsp3861A861VgCagTa88AY.980.000632
ORF1ab/nsp3861A861VgCagTa88B.1.1.280.00249
ORF1ab/nsp3861A861VgCagTa77AY.1020.000186
ORF1ab/nsp3861A861VgCagTa77AY.50.000145
ORF1ab/nsp3861A861VgCagTa77B.1.1.2220.001428
ORF1ab/nsp3861A861VgCagTa77B.1.1.250.00398
ORF1ab/nsp3861A861VgCagTa77B.1.1.3050.027027
ORF1ab/nsp3861A861VgCagTa77B.1.177.100.006146
ORF1ab/nsp3861A861VgCagTa77B.1.177.600.001529
ORF1ab/nsp3861A861VgCagTa77B.1.2430.000487
ORF1ab/nsp3861A861VgCagTa77B.1.4270.000353
ORF1ab/nsp3861A861VgCagTa77D.20.000525
ORF1ab/nsp3861A861VgCagTa66AY.39.10.000238
ORF1ab/nsp3861A861VgCagTa66AY.90.000406
ORF1ab/nsp3861A861VgCagTa66B.1.1.500.004073
ORF1ab/nsp3861A861VgCagTa66B.1.258.70.011472
ORF1ab/nsp3861A861VgCagTa66B.1.4000.002574
ORF1ab/nsp3861A861VgCagTa66B.1.4990.006303
ORF1ab/nsp3861A861VgCagTa55AY.540.000477
ORF1ab/nsp3861A861VgCagTa55B.1.1.3060.002192
ORF1ab/nsp3861A861VgCagTa55B.1.110.30.003592
ORF1ab/nsp3861A861VgCagTa55B.1.2340.00066
ORF1ab/nsp3861A861VgCagTa55B.1.6370.000365
ORF1ab/nsp3861A861VgCagTa44A.23.10.002817
ORF1ab/nsp3861A861VgCagTa44AY.1100.000451
ORF1ab/nsp3861A861VgCagTa44AY.4.50.00043
ORF1ab/nsp3861A861VgCagTa44AY.680.001095
ORF1ab/nsp3861A861VgCagTa44B.1.2580.000266
ORF1ab/nsp3861A861VgCagTa44B.1.466.20.001565
ORF1ab/nsp3861A861VgCagTa44B.1.5100.105263
ORF1ab/nsp3861A861VgCagTa44B.1.5230.009804
ORF1ab/nsp3861A861VgCagTa44C.170.222222
ORF1ab/nsp3861A861VgCagTa44Q.10.000505
ORF1ab/nsp3861A861VgCagTa33A0.001161
ORF1ab/nsp3861A861VgCagTa33AY.1010.001471
ORF1ab/nsp3861A861VgCagTa33AY.1060.001005
ORF1ab/nsp3861A861VgCagTa33AY.1080.003308
ORF1ab/nsp3861A861VgCagTa33AY.230.000209
ORF1ab/nsp3861A861VgCagTa33AY.240.001293
ORF1ab/nsp3861A861VgCagTa33AY.590.001589
ORF1ab/nsp3861A861VgCagTa33AY.9.10.000251
ORF1ab/nsp3861A861VgCagTa33AY.9.20.00011
ORF1ab/nsp3861A861VgCagTa33AZ.30.004559
ORF1ab/nsp3861A861VgCagTa33B.1.1.2140.000166
ORF1ab/nsp3861A861VgCagTa33B.1.1.2840.000322
ORF1ab/nsp3861A861VgCagTa33B.1.1.3330.003229
ORF1ab/nsp3861A861VgCagTa33B.1.177.830.004444
ORF1ab/nsp3861A861VgCagTa33B.1.36.80.003
ORF1ab/nsp3861A861VgCagTa33B.1.617.10.000387
ORF1ab/nsp3861A861VgCagTa33B.1.6280.001057
ORF1ab/nsp3861A861VgCagTa33B.520.030303
ORF1ab/nsp3861A861VgCagTa33P.1.120.001452
ORF1ab/nsp3861A861VgCagTa33P.1.150.000697
ORF1ab/nsp3861A861VgCagTa22A.20.001324
ORF1ab/nsp3861A861VgCagTa22AY.100.00106
ORF1ab/nsp3861A861VgCagTa22AY.23.10.000835
ORF1ab/nsp3861A861VgCagTa22AY.29.10.000441
ORF1ab/nsp3861A861VgCagTa22AY.320.001065
ORF1ab/nsp3861A861VgCagTa22AY.470.000062
ORF1ab/nsp3861A861VgCagTa22AY.5.30.000675
ORF1ab/nsp3861A861VgCagTa22AY.5.40.000553
ORF1ab/nsp3861A861VgCagTa22AY.530.000575
ORF1ab/nsp3861A861VgCagTa22AY.70.000392
ORF1ab/nsp3861A861VgCagTa22AY.740.000231
ORF1ab/nsp3861A861VgCagTa22AY.75.10.000361
ORF1ab/nsp3861A861VgCagTa22AY.760.009662
ORF1ab/nsp3861A861VgCagTa22AZ.10.001735
ORF1ab/nsp3861A861VgCagTa22B.1.1.1150.017857
ORF1ab/nsp3861A861VgCagTa22B.1.1.2320.00363
ORF1ab/nsp3861A861VgCagTa22B.1.1.3160.00185
ORF1ab/nsp3861A861VgCagTa22B.1.1.330.000842
ORF1ab/nsp3861A861VgCagTa22B.1.1.3540.008772
ORF1ab/nsp3861A861VgCagTa22B.1.1.3710.020833
ORF1ab/nsp3861A861VgCagTa22B.1.1.4180.045455
ORF1ab/nsp3861A861VgCagTa22B.1.1.4340.000697
ORF1ab/nsp3861A861VgCagTa22B.1.1.5060.074074
ORF1ab/nsp3861A861VgCagTa22B.1.1.5210.010695
ORF1ab/nsp3861A861VgCagTa22B.1.160.260.004843
ORF1ab/nsp3861A861VgCagTa22B.1.177.570.000562
ORF1ab/nsp3861A861VgCagTa22B.1.177.70.00033
ORF1ab/nsp3861A861VgCagTa22B.1.177.730.001133
ORF1ab/nsp3861A861VgCagTa22B.1.258.140.001961
ORF1ab/nsp3861A861VgCagTa22B.1.2930.025
ORF1ab/nsp3861A861VgCagTa22B.1.2980.004228
ORF1ab/nsp3861A861VgCagTa22B.1.36.390.004435
ORF1ab/nsp3861A861VgCagTa22B.1.5960.000174
ORF1ab/nsp3861A861VgCagTa22B.1.6190.001742
ORF1ab/nsp3861A861VgCagTa22B.1.6340.006849
ORF1ab/nsp3861A861VgCagTa22B.400.000729
ORF1ab/nsp3861A861VgCagTa22B.6.60.001778
ORF1ab/nsp3861A861VgCagTa22P.20.000373
ORF1ab/nsp3861A861VgCagTa11A.10.000282
ORF1ab/nsp3861A861VgCagTa11A.190.009434
ORF1ab/nsp3861A861VgCagTa11AD.20.000219
ORF1ab/nsp3861A861VgCagTa11AY.1140.000231
ORF1ab/nsp3861A861VgCagTa11AY.120.000316
ORF1ab/nsp3861A861VgCagTa11AY.120.20.001285
ORF1ab/nsp3861A861VgCagTa11AY.1210.000135
ORF1ab/nsp3861A861VgCagTa11AY.180.010101
ORF1ab/nsp3861A861VgCagTa11AY.190.00114
ORF1ab/nsp3861A861VgCagTa11AY.270.000065
ORF1ab/nsp3861A861VgCagTa11AY.3.10.000085
ORF1ab/nsp3861A861VgCagTa11AY.370.000316
ORF1ab/nsp3861A861VgCagTa11AY.4.2.10.000149
ORF1ab/nsp3861A861VgCagTa11AY.4.30.000842
ORF1ab/nsp3861A861VgCagTa11AY.4.40.000409
ORF1ab/nsp3861A861VgCagTa11AY.450.000122
ORF1ab/nsp3861A861VgCagTa11AY.46.20.000635
ORF1ab/nsp3861A861VgCagTa11AY.510.000909
ORF1ab/nsp3861A861VgCagTa11AY.520.000814
ORF1ab/nsp3861A861VgCagTa11AY.550.000917
ORF1ab/nsp3861A861VgCagTa11AY.580.000907
ORF1ab/nsp3861A861VgCagTa11AY.640.000595
ORF1ab/nsp3861A861VgCagTa11AY.7.10.000113
ORF1ab/nsp3861A861VgCagTa11AY.7.20.000559
ORF1ab/nsp3861A861VgCagTa11AY.720.001361
ORF1ab/nsp3861A861VgCagTa11AY.730.000665
ORF1ab/nsp3861A861VgCagTa11AY.770.001127
ORF1ab/nsp3861A861VgCagTa11AY.840.000437
ORF1ab/nsp3861A861VgCagTa11AY.870.000833
ORF1ab/nsp3861A861VgCagTa11AY.91.10.004065
ORF1ab/nsp3861A861VgCagTa11AY.920.000287
ORF1ab/nsp3861A861VgCagTa11AY.99.20.000092
ORF1ab/nsp3861A861VgCagTa11B.1.1.1320.014925
ORF1ab/nsp3861A861VgCagTa11B.1.1.1410.002012
ORF1ab/nsp3861A861VgCagTa11B.1.1.1890.001513
ORF1ab/nsp3861A861VgCagTa11B.1.1.1920.002309
ORF1ab/nsp3861A861VgCagTa11B.1.1.2070.001182
ORF1ab/nsp3861A861VgCagTa11B.1.1.2160.00089
ORF1ab/nsp3861A861VgCagTa11B.1.1.3040.002809
ORF1ab/nsp3861A861VgCagTa11B.1.1.3170.000412
ORF1ab/nsp3861A861VgCagTa11B.1.1.3180.000302
ORF1ab/nsp3861A861VgCagTa11B.1.1.3260.001761
ORF1ab/nsp3861A861VgCagTa11B.1.1.3530.020833
ORF1ab/nsp3861A861VgCagTa11B.1.1.3690.000446
ORF1ab/nsp3861A861VgCagTa11B.1.1.390.00051
ORF1ab/nsp3861A861VgCagTa11B.1.1.3960.045455
ORF1ab/nsp3861A861VgCagTa11B.1.1.3970.002252
ORF1ab/nsp3861A861VgCagTa11B.1.1.4090.002833
ORF1ab/nsp3861A861VgCagTa11B.1.1.4620.008621
ORF1ab/nsp3861A861VgCagTa11B.1.1.4640.001473
ORF1ab/nsp3861A861VgCagTa11B.1.1.4870.005587
ORF1ab/nsp3861A861VgCagTa11B.1.1.5170.006803
ORF1ab/nsp3861A861VgCagTa11B.1.1180.006711
ORF1ab/nsp3861A861VgCagTa11B.1.1390.000733
ORF1ab/nsp3861A861VgCagTa11B.1.1700.00431
ORF1ab/nsp3861A861VgCagTa11B.1.177.210.000076
ORF1ab/nsp3861A861VgCagTa11B.1.177.40.000211
ORF1ab/nsp3861A861VgCagTa11B.1.177.410.0025
ORF1ab/nsp3861A861VgCagTa11B.1.177.440.000519
ORF1ab/nsp3861A861VgCagTa11B.1.177.560.000668
ORF1ab/nsp3861A861VgCagTa11B.1.177.750.001041
ORF1ab/nsp3861A861VgCagTa11B.1.177.810.000189
ORF1ab/nsp3861A861VgCagTa11B.1.2410.000812
ORF1ab/nsp3861A861VgCagTa11B.1.258.110.000396
ORF1ab/nsp3861A861VgCagTa11B.1.3110.000275
ORF1ab/nsp3861A861VgCagTa11B.1.3290.000608
ORF1ab/nsp3861A861VgCagTa11B.1.3490.000715
ORF1ab/nsp3861A861VgCagTa11B.1.351.20.000303
ORF1ab/nsp3861A861VgCagTa11B.1.36.240.006173
ORF1ab/nsp3861A861VgCagTa11B.1.36.310.001751
ORF1ab/nsp3861A861VgCagTa11B.1.3690.000285
ORF1ab/nsp3861A861VgCagTa11B.1.3750.00082
ORF1ab/nsp3861A861VgCagTa11B.1.3980.002976
ORF1ab/nsp3861A861VgCagTa11B.1.4360.001029
ORF1ab/nsp3861A861VgCagTa11B.1.4590.004082
ORF1ab/nsp3861A861VgCagTa11B.1.4650.003802
ORF1ab/nsp3861A861VgCagTa11B.1.4740.001901
ORF1ab/nsp3861A861VgCagTa11B.1.4970.000315
ORF1ab/nsp3861A861VgCagTa11B.1.5250.000113
ORF1ab/nsp3861A861VgCagTa11B.1.6090.000479
ORF1ab/nsp3861A861VgCagTa11B.1.619.10.000641
ORF1ab/nsp3861A861VgCagTa11B.1.6310.003367
ORF1ab/nsp3861A861VgCagTa11B.390.002331
ORF1ab/nsp3861A861VgCagTa11B.60.00091
ORF1ab/nsp3861A861VgCagTa11C.110.010638
ORF1ab/nsp3861A861VgCagTa11C.20.016129
ORF1ab/nsp3861A861VgCagTa11C.330.058824
ORF1ab/nsp3861A861VgCagTa11P.1.140.000048
ORF1ab/nsp3861A861VgCagTa11P.1.170.000162
ORF1ab/nsp3861A861VgCagTa11P.60.003145
ORF1ab/nsp3861A861VgCagTa11P.70.004367
ORF1ab/nsp3861A861VgCagTa11Q.30.000145