CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 861 | A861V | A1679V | nonsyn | gCa | gTa | 5620 | 5620 | 1 | 5300-5302 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 5620 | 5620 | All | 0.001075 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1244 | 1244 | B.1.1.7 | 0.001114 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 674 | 674 | AY.20 | 0.026195 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 469 | 469 | AY.25 | 0.002821 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 301 | 301 | AY.4 | 0.000468 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 170 | 170 | AY.6 | 0.006992 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 169 | 169 | AY.44 | 0.001029 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 160 | 160 | B.1.1.138 | 0.969697 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 152 | 152 | B.1.177 | 0.002001 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 149 | 149 | B.1.617.2 | 0.000561 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 130 | 130 | B.1.421 | 0.970149 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 126 | 126 | AY.120 | 0.004685 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 93 | 93 | B.1.2 | 0.000819 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 89 | 89 | B.1 | 0.000815 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 89 | 89 | B.1.240 | 0.019185 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 82 | 82 | AY.43 | 0.000363 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 77 | 77 | AY.103 | 0.000478 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 76 | 76 | B.1.36 | 0.011088 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 70 | 70 | B.1.429 | 0.001647 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 56 | 56 | AY.3 | 0.000557 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 53 | 53 | AY.39 | 0.00131 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 45 | 45 | B.1.1 | 0.000816 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 44 | 44 | B.1.526 | 0.001034 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 40 | 40 | P.1 | 0.00063 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 39 | 39 | B.1.258.2 | 0.175676 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 34 | 34 | B.1.160 | 0.00106 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 33 | 33 | AY.75 | 0.001849 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 31 | 31 | B.1.1.70 | 0.010573 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 30 | 30 | AY.29 | 0.000473 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 28 | 28 | B.1.396 | 0.01976 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 26 | 26 | AY.42 | 0.001046 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 26 | 26 | B.1.621 | 0.002301 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 25 | 25 | AY.98.1 | 0.001211 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 25 | 25 | B.1.470 | 0.035112 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 23 | 23 | B.1.1.277 | 0.017451 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 22 | 22 | AY.4.2 | 0.000477 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 19 | 19 | B.1.36.29 | 0.009829 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 18 | 18 | AY.119 | 0.000636 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 18 | 18 | B.1.210 | 0.03838 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 18 | 18 | B.1.221 | 0.001279 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 16 | 16 | AY.100 | 0.000736 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 16 | 16 | AY.117 | 0.001352 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 15 | 15 | C.37 | 0.001741 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 13 | 13 | AY.118 | 0.000814 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 13 | 13 | AY.46 | 0.001353 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 12 | 12 | AY.113 | 0.001709 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 12 | 12 | B.1.1.406 | 0.077922 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 12 | 12 | C.36 | 0.010929 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 11 | 11 | B.1.177.82 | 0.005251 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 11 | 11 | B.1.438.1 | 0.00118 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 10 | 10 | AY.33 | 0.000668 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 10 | 10 | B.1.1.519 | 0.000397 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 10 | 10 | B.1.160.16 | 0.009294 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 10 | 10 | B.1.456 | 0.03268 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 9 | 9 | AY.26 | 0.000255 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 9 | 9 | AY.61 | 0.000943 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 9 | 9 | B.1.126 | 0.01148 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 9 | 9 | B.1.351 | 0.000268 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 9 | 9 | C.16 | 0.009544 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 8 | 8 | AA.1 | 0.057971 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 8 | 8 | AY.14 | 0.000704 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 8 | 8 | AY.98 | 0.000632 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 8 | 8 | B.1.1.28 | 0.00249 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | AY.102 | 0.000186 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | AY.5 | 0.000145 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | B.1.1.222 | 0.001428 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | B.1.1.25 | 0.00398 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | B.1.1.305 | 0.027027 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | B.1.177.10 | 0.006146 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | B.1.177.60 | 0.001529 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | B.1.243 | 0.000487 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | B.1.427 | 0.000353 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 7 | 7 | D.2 | 0.000525 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 6 | 6 | AY.39.1 | 0.000238 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 6 | 6 | B.1.1.50 | 0.004073 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 6 | 6 | B.1.258.7 | 0.011472 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 6 | 6 | B.1.400 | 0.002574 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 6 | 6 | B.1.499 | 0.006303 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 5 | 5 | B.1.110.3 | 0.003592 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 5 | 5 | B.1.234 | 0.00066 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | A.23.1 | 0.002817 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | AY.110 | 0.000451 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | AY.68 | 0.001095 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | B.1.258 | 0.000266 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | B.1.510 | 0.105263 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | B.1.523 | 0.009804 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | C.17 | 0.222222 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | A | 0.001161 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.101 | 0.001471 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.106 | 0.001005 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.108 | 0.003308 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.24 | 0.001293 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | AZ.3 | 0.004559 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.1.1.284 | 0.000322 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.1.1.333 | 0.003229 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.1.177.83 | 0.004444 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.1.36.8 | 0.003 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | B.52 | 0.030303 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.23.1 | 0.000835 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AY.76 | 0.009662 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | AZ.1 | 0.001735 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.115 | 0.017857 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.232 | 0.00363 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.316 | 0.00185 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.354 | 0.008772 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.371 | 0.020833 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.418 | 0.045455 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.506 | 0.074074 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.1.521 | 0.010695 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.160.26 | 0.004843 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.177.57 | 0.000562 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.258.14 | 0.001961 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.293 | 0.025 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.298 | 0.004228 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.36.39 | 0.004435 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.619 | 0.001742 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.1.634 | 0.006849 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | B.6.6 | 0.001778 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | A.19 | 0.009434 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.18 | 0.010101 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.91.1 | 0.004065 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.132 | 0.014925 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.353 | 0.020833 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.396 | 0.045455 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.462 | 0.008621 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.487 | 0.005587 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.1.517 | 0.006803 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.118 | 0.006711 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.170 | 0.00431 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.177.41 | 0.0025 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.465 | 0.003802 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | C.11 | 0.010638 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | C.2 | 0.016129 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | C.33 | 0.058824 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | P.7 | 0.004367 |
ORF1ab/nsp3 | 861 | A861V | gCa | gTa | 1 | 1 | Q.3 | 0.000145 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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