CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 860 & Codon = aAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3860T860NT1678NnonsynaCtaAt24524515297-5299

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3860T860NaCtaAt245245All0.000047
ORF1ab/nsp3860T860NaCtaAt187187B.1.1.70.000167
ORF1ab/nsp3860T860NaCtaAt1717B.1.6230.00912
ORF1ab/nsp3860T860NaCtaAt1010B.1.4060.060606
ORF1ab/nsp3860T860NaCtaAt55AY.40.000008
ORF1ab/nsp3860T860NaCtaAt33AY.750.000168
ORF1ab/nsp3860T860NaCtaAt22AY.1190.000071
ORF1ab/nsp3860T860NaCtaAt22AY.430.000009
ORF1ab/nsp3860T860NaCtaAt22AY.440.000012
ORF1ab/nsp3860T860NaCtaAt22AY.660.002139
ORF1ab/nsp3860T860NaCtaAt22B.1.617.20.000008
ORF1ab/nsp3860T860NaCtaAt22P.10.000032
ORF1ab/nsp3860T860NaCtaAt11AY.290.000016
ORF1ab/nsp3860T860NaCtaAt11AY.39.10.00004
ORF1ab/nsp3860T860NaCtaAt11AY.790.001211
ORF1ab/nsp3860T860NaCtaAt11B.10.000009
ORF1ab/nsp3860T860NaCtaAt11B.1.10.000018
ORF1ab/nsp3860T860NaCtaAt11B.1.1.2940.001266
ORF1ab/nsp3860T860NaCtaAt11B.1.1770.000013
ORF1ab/nsp3860T860NaCtaAt11B.1.177.810.000189
ORF1ab/nsp3860T860NaCtaAt11B.1.20.000009
ORF1ab/nsp3860T860NaCtaAt11B.1.3510.00003
ORF1ab/nsp3860T860NaCtaAt11B.280.003279