CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 85

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp385A85VA903VnonsyngCtgTt14337143170.9986052972-2974
ORF1ab/nsp385A85VA903VnonsyngCTgTC14337190.001325242972-2974
ORF1ab/nsp385A85VA903VnonsyngCTgTG1433710.00006974962972-2974
ORF1ab/nsp385A85AA903AsyngcTgcC11630115240.9908862972-2974
ORF1ab/nsp385A85AA903AsyngcTgcA116301040.008942392972-2974
ORF1ab/nsp385A85AA903AsyngcTgcG1163020.0001719692972-2974
ORF1ab/nsp385A85TA903TnonsynGctAct72172112972-2974
ORF1ab/nsp385A85SA903SnonsynGctTct2122100.9905662972-2974
ORF1ab/nsp385A85SA903SnonsynGCtAGt21220.009433962972-2974
ORF1ab/nsp385A85delA903deldelGCT---434312972-2974
ORF1ab/nsp385A85DA903DnonsyngCtgAt363612972-2974
ORF1ab/nsp385A85PA903PnonsynGctCct1070.72972-2974
ORF1ab/nsp385A85PA903PnonsynGcTCcG1010.12972-2974
ORF1ab/nsp385A85PA903PnonsynGcTCcC1010.12972-2974
ORF1ab/nsp385A85PA903PnonsynGcTCcA1010.12972-2974
ORF1ab/nsp385A85GA903GnonsyngCtgGt540.82972-2974
ORF1ab/nsp385A85GA903GnonsyngCTgGC510.22972-2974
ORF1ab/nsp385A85del2A903del2delGCt--t320.6666672972-2974
ORF1ab/nsp385A85IA903InonsynGCtATt320.6666672972-2974
ORF1ab/nsp385A85del2A903del2delGCT--C310.3333332972-2974
ORF1ab/nsp385A85IA903InonsynGCTATC310.3333332972-2974
ORF1ab/nsp385A85YA903YnonsynGCtTAt1112972-2974
ORF1ab/nsp385A85del1A903del1delgcTgc-1112972-2974
ORF1ab/nsp385A85HA903HnonsynGCtCAt1112972-2974

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp385A85VgCtgTt1431714337All0.002738
ORF1ab/nsp385A85VgCTgTC1914337All0.000004
ORF1ab/nsp385A85VgCTgTG114337All0
ORF1ab/nsp385A85AgcTgcC1152411630All0.002204
ORF1ab/nsp385A85AgcTgcA10411630All0.00002
ORF1ab/nsp385A85AgcTgcG211630All0
ORF1ab/nsp385A85AgcTgcC1086210862AY.200.422153
ORF1ab/nsp385A85VgCtgTt17141714B.1.1.630.661265
ORF1ab/nsp385A85VgCtgTt13761376B.1.4290.032376
ORF1ab/nsp385A85VgCtgTt13021303AY.260.03686
ORF1ab/nsp385A85VgCTgTG11303AY.260.000028
ORF1ab/nsp385A85VgCtgTt12591259B.1.1.70.001127
ORF1ab/nsp385A85VgCtgTt11791179B.1.617.20.004439
ORF1ab/nsp385A85VgCtgTt908908AY.40.001413
ORF1ab/nsp385A85VgCtgTt732732W.40.989189
ORF1ab/nsp385A85TGctAct721721All0.000138
ORF1ab/nsp385A85VgCtgTt566566B.10.005184
ORF1ab/nsp385A85VgCtgTt411412B.1.177.530.983254
ORF1ab/nsp385A85VgCTgTC1412B.1.177.530.002392
ORF1ab/nsp385A85VgCtgTt408408AY.440.002483
ORF1ab/nsp385A85TGctAct380380AY.430.001684
ORF1ab/nsp385A85VgCtgTt363363AY.1190.012817
ORF1ab/nsp385A85VgCtgTt310310AY.75.10.055896
ORF1ab/nsp385A85VgCtgTt308308AY.430.001365
ORF1ab/nsp385A85VgCtgTt257257AY.250.001546
ORF1ab/nsp385A85SGctTct210212All0.00004
ORF1ab/nsp385A85SGCtAGt2212All0
ORF1ab/nsp385A85VgCtgTt206206W.20.995169
ORF1ab/nsp385A85VgCtgTt188188W.30.989474
ORF1ab/nsp385A85VgCtgTt161161AY.330.010751
ORF1ab/nsp385A85VgCtgTt156156B.1.1770.002054
ORF1ab/nsp385A85VgCtgTt152152B.1.20.001338
ORF1ab/nsp385A85AgcTgcA87149B.1.1.70.000078
ORF1ab/nsp385A85AgcTgcC62149B.1.1.70.000056
ORF1ab/nsp385A85VgCtgTt137137B.1.10.002485
ORF1ab/nsp385A85VgCtgTt129129AY.290.002035
ORF1ab/nsp385A85VgCtgTt105105W.10.913043
ORF1ab/nsp385A85AgcTgcC100100B.1.617.20.000377
ORF1ab/nsp385A85VgCtgTt9494P.10.001481
ORF1ab/nsp385A85VgCtgTt9393B.1.6210.008232
ORF1ab/nsp385A85VgCtgTt9292AY.1020.002439
ORF1ab/nsp385A85VgCtgTt9090AY.46.50.017857
ORF1ab/nsp385A85VgCtgTt8989AY.390.002199
ORF1ab/nsp385A85VgCtgTt8080AY.30.000796
ORF1ab/nsp385A85AgcTgcC7777B.1.1.3480.061306
ORF1ab/nsp385A85AgcTgcC7272AY.860.059751
ORF1ab/nsp385A85SGctTct6666B.1.6020.431373
ORF1ab/nsp385A85TGctAct6565B.1.1.70.000058
ORF1ab/nsp385A85VgCtgTt5656B.1.5250.006337
ORF1ab/nsp385A85VgCtgTt5151AY.1030.000317
ORF1ab/nsp385A85VgCtgTt5151B.1.360.007441
ORF1ab/nsp385A85delGCT---4343All0.000008
ORF1ab/nsp385A85VgCtgTt4343AY.460.004475
ORF1ab/nsp385A85VgCtgTt4040R.10.0036
ORF1ab/nsp385A85VgCtgTt2038AY.200.000777
ORF1ab/nsp385A85VgCTgTC1838AY.200.0007
ORF1ab/nsp385A85VgCtgTt3737AZ.10.03209
ORF1ab/nsp385A85DgCtgAt3636All0.000007
ORF1ab/nsp385A85VgCtgTt3535AY.50.000723
ORF1ab/nsp385A85VgCtgTt3434AY.4.50.003655
ORF1ab/nsp385A85TGctAct3333AY.1000.001518
ORF1ab/nsp385A85TGctAct3131B.1.617.20.000117
ORF1ab/nsp385A85VgCtgTt3030P.20.005599
ORF1ab/nsp385A85SGctTct2525B.1.20.00022
ORF1ab/nsp385A85VgCtgTt2323B.1.2580.001531
ORF1ab/nsp385A85AgcTgcC2222AY.260.000623
ORF1ab/nsp385A85AgcTgcC2222AY.440.000134
ORF1ab/nsp385A85VgCtgTt2222AY.99.20.002027
ORF1ab/nsp385A85TGctAct2121AY.39.10.000832
ORF1ab/nsp385A85AgcTgcC2121AY.40.000033
ORF1ab/nsp385A85VgCtgTt2121AY.470.000653
ORF1ab/nsp385A85VgCtgTt2121B.1.3510.000624
ORF1ab/nsp385A85TGctAct2020AY.1030.000124
ORF1ab/nsp385A85TGctAct2020B.1.3060.114286
ORF1ab/nsp385A85VgCtgTt2020C.370.002321
ORF1ab/nsp385A85VgCtgTt1818AY.1200.000669
ORF1ab/nsp385A85VgCtgTt1818B.1.1.5190.000715
ORF1ab/nsp385A85AgcTgcC1617AY.430.000071
ORF1ab/nsp385A85AgcTgcG117AY.430.000004
ORF1ab/nsp385A85VgCtgTt1717B.1.177.170.013957
ORF1ab/nsp385A85SGctTct1616AY.40.000025
ORF1ab/nsp385A85TGctAct1515AY.1020.000398
ORF1ab/nsp385A85VgCtgTt1515AY.140.00132
ORF1ab/nsp385A85VgCtgTt1515AY.4.20.000325
ORF1ab/nsp385A85TGctAct1515AY.750.00084
ORF1ab/nsp385A85TGctAct1515B.1.3510.000446
ORF1ab/nsp385A85SGctTct1515D.20.001126
ORF1ab/nsp385A85VgCtgTt1515P.1.140.000717
ORF1ab/nsp385A85TGctAct1414AY.40.000022
ORF1ab/nsp385A85VgCtgTt1414B.1.1600.000437
ORF1ab/nsp385A85TGctAct1414B.1.20.000123
ORF1ab/nsp385A85VgCtgTt1414B.1.214.20.008393
ORF1ab/nsp385A85VgCtgTt1414B.1.3490.010007
ORF1ab/nsp385A85VgCtgTt1414B.1.4270.000707
ORF1ab/nsp385A85VgCtgTt1414B.1.5260.000329
ORF1ab/nsp385A85AgcTgcC1313AY.1030.000081
ORF1ab/nsp385A85AgcTgcC1313AY.1170.001099
ORF1ab/nsp385A85VgCtgTt1313AY.420.000523
ORF1ab/nsp385A85AgcTgcC1213B.1.10.000218
ORF1ab/nsp385A85AgcTgcA113B.1.10.000018
ORF1ab/nsp385A85VgCtgTt1313C.160.013786
ORF1ab/nsp385A85VgCtgTt1212AY.1090.008876
ORF1ab/nsp385A85AgcTgcC1212AY.250.000072
ORF1ab/nsp385A85DgCtgAt1212AY.610.001257
ORF1ab/nsp385A85VgCtgTt1212AY.98.10.000581
ORF1ab/nsp385A85VgCtgTt1212B.1.3620.01849
ORF1ab/nsp385A85SGctTct1212B.1.4290.000282
ORF1ab/nsp385A85AgcTgcC1111AY.1130.001566
ORF1ab/nsp385A85VgCtgTt1111AY.1180.000689
ORF1ab/nsp385A85VgCtgTt1111AY.230.000767
ORF1ab/nsp385A85VgCtgTt1111AY.450.001339
ORF1ab/nsp385A85AgcTgcC1111AY.710.005226
ORF1ab/nsp385A85VgCtgTt1111AY.980.000869
ORF1ab/nsp385A85VgCtgTt1111B.1.1.4340.003834
ORF1ab/nsp385A85VgCtgTt1111B.1.2430.000765
ORF1ab/nsp385A85PGctCct710All0.000001
ORF1ab/nsp385A85PGcTCcA110All0
ORF1ab/nsp385A85PGcTCcG110All0
ORF1ab/nsp385A85PGcTCcC110All0
ORF1ab/nsp385A85SGctTct1010AY.430.000044
ORF1ab/nsp385A85VgCtgTt1010B.1.177.120.001517
ORF1ab/nsp385A85VgCtgTt1010B.1.2210.00071
ORF1ab/nsp385A85VgCtgTt1010B.1.5170.00427
ORF1ab/nsp385A85AgcTgcC99AY.1040.017857
ORF1ab/nsp385A85VgCtgTt99AY.1170.000761
ORF1ab/nsp385A85VgCtgTt99AY.39.10.000357
ORF1ab/nsp385A85DgCtgAt99B.1.617.20.000034
ORF1ab/nsp385A85VgCtgTt99B.1.6370.000658
ORF1ab/nsp385A85VgCtgTt88AY.1000.000368
ORF1ab/nsp385A85VgCtgTt88AY.130.001288
ORF1ab/nsp385A85AgcTgcC88AY.230.000558
ORF1ab/nsp385A85VgCtgTt88AY.270.000518
ORF1ab/nsp385A85AgcTgcC88AY.30.00008
ORF1ab/nsp385A85AgcTgcC88AY.450.000973
ORF1ab/nsp385A85AgcTgcC88AY.50.000165
ORF1ab/nsp385A85VgCtgTt88AY.610.000838
ORF1ab/nsp385A85VgCtgTt88AY.9.20.000294
ORF1ab/nsp385A85VgCtgTt88B.1.1.280.00249
ORF1ab/nsp385A85AgcTgcC88B.1.1.3740.019002
ORF1ab/nsp385A85SGctTct88B.1.1.70.000007
ORF1ab/nsp385A85AgcTgcC88B.1.1770.000105
ORF1ab/nsp385A85VgCtgTt88B.1.2400.001725
ORF1ab/nsp385A85VgCtgTt88P.1.10.002541
ORF1ab/nsp385A85VgCtgTt77AY.1130.000997
ORF1ab/nsp385A85AgcTgcC77AY.360.001037
ORF1ab/nsp385A85VgCtgTt77AY.46.60.000505
ORF1ab/nsp385A85VgCtgTt77AY.60.000288
ORF1ab/nsp385A85VgCtgTt77AY.640.004167
ORF1ab/nsp385A85VgCtgTt77AY.900.004791
ORF1ab/nsp385A85VgCtgTt77B.1.1.2140.000388
ORF1ab/nsp385A85VgCtgTt77B.1.1.2220.001428
ORF1ab/nsp385A85VgCtgTt77B.1.1.4860.011041
ORF1ab/nsp385A85delGCT---77B.1.1.70.000006
ORF1ab/nsp385A85VgCtgTt77B.1.160.90.05036
ORF1ab/nsp385A85VgCtgTt77B.1.3110.001922
ORF1ab/nsp385A85AgcTgcC77B.1.3510.000208
ORF1ab/nsp385A85VgCtgTt77B.1.36.180.002941
ORF1ab/nsp385A85AgcTgcA77P.10.00011
ORF1ab/nsp385A85VgCtgTt77P.1.150.001626
ORF1ab/nsp385A85VgCtgTt66AD.20.001314
ORF1ab/nsp385A85AgcTgcC66AY.1020.000159
ORF1ab/nsp385A85AgcTgcC66AY.420.000241
ORF1ab/nsp385A85VgCtgTt66AY.590.003178
ORF1ab/nsp385A85VgCtgTt66AY.620.002614
ORF1ab/nsp385A85VgCtgTt66AY.750.000336
ORF1ab/nsp385A85AgcTgcC66AY.920.001724
ORF1ab/nsp385A85TGctAct66B.10.000055
ORF1ab/nsp385A85VgCtgTt66B.1.1.1890.009077
ORF1ab/nsp385A85VgCtgTt66B.1.1.3540.026316
ORF1ab/nsp385A85VgCtgTt66B.1.177.210.000459
ORF1ab/nsp385A85AgcTgcC46B.1.20.000035
ORF1ab/nsp385A85AgcTgcA26B.1.20.000018
ORF1ab/nsp385A85TGctAct66B.1.2290.058252
ORF1ab/nsp385A85VgCtgTt66B.1.36.210.012959
ORF1ab/nsp385A85VgCtgTt66B.1.36.80.006
ORF1ab/nsp385A85VgCtgTt66B.1.4950.054545
ORF1ab/nsp385A85AgcTgcA56B.1.5260.000118
ORF1ab/nsp385A85AgcTgcC16B.1.5260.000024
ORF1ab/nsp385A85VgCtgTt66B.1.5650.004862
ORF1ab/nsp385A85VgCtgTt66B.1.5960.000523
ORF1ab/nsp385A85VgCtgTt66Q.10.000758
ORF1ab/nsp385A85GgCtgGt45All0.000001
ORF1ab/nsp385A85GgCTgGC15All0
ORF1ab/nsp385A85TGctAct55AY.46.20.003177
ORF1ab/nsp385A85AgcTgcC55AY.46.60.000361
ORF1ab/nsp385A85AgcTgcC55AY.99.20.000461
ORF1ab/nsp385A85SGctTct55B.10.000046
ORF1ab/nsp385A85VgCtgTt55B.1.1.2320.009074
ORF1ab/nsp385A85VgCtgTt55B.1.1.4320.006329
ORF1ab/nsp385A85VgCtgTt55B.1.2340.00066
ORF1ab/nsp385A85VgCtgTt55B.1.5110.172414
ORF1ab/nsp385A85VgCtgTt55B.1.5230.012255
ORF1ab/nsp385A85VgCtgTt55B.6.60.004444
ORF1ab/nsp385A85VgCtgTt44AA.30.108108
ORF1ab/nsp385A85VgCtgTt44AY.1100.000451
ORF1ab/nsp385A85AgcTgcC44AY.1180.000251
ORF1ab/nsp385A85AgcTgcC44AY.1190.000141
ORF1ab/nsp385A85SGctTct44AY.250.000024
ORF1ab/nsp385A85VgCtgTt44AY.3.10.000341
ORF1ab/nsp385A85AgcTgcC44AY.390.000099
ORF1ab/nsp385A85SGctTct44AY.440.000024
ORF1ab/nsp385A85TGctAct44AY.440.000024
ORF1ab/nsp385A85VgCtgTt44AY.680.001095
ORF1ab/nsp385A85VgCtgTt44B.1.1.10.001307
ORF1ab/nsp385A85VgCtgTt44B.1.1.3180.001207
ORF1ab/nsp385A85VgCtgTt44B.1.1.3980.012903
ORF1ab/nsp385A85AgcTgcC44B.1.1600.000125
ORF1ab/nsp385A85VgCtgTt44B.1.177.70.000659
ORF1ab/nsp385A85VgCtgTt44B.1.2390.004884
ORF1ab/nsp385A85VgCtgTt44B.1.351.50.002398
ORF1ab/nsp385A85AgcTgcC44B.1.4290.000094
ORF1ab/nsp385A85VgCtgTt44B.1.438.10.000429
ORF1ab/nsp385A85SGctTct44B.1.5260.000094
ORF1ab/nsp385A85AgcTgcC44B.1.5750.001214
ORF1ab/nsp385A85VgCtgTt44B.1.5750.001214
ORF1ab/nsp385A85VgCtgTt44B.1.5770.002749
ORF1ab/nsp385A85delGCT---44B.1.617.20.000015
ORF1ab/nsp385A85SGctTct44B.1.617.20.000015
ORF1ab/nsp385A85TGctAct44B.1.6210.000354
ORF1ab/nsp385A85VgCtgTt44D.20.0003
ORF1ab/nsp385A85VgCtgTt33A.10.000846
ORF1ab/nsp385A85VgCtgTt33AE.80.001467
ORF1ab/nsp385A85IGCtATt23All0
ORF1ab/nsp385A85del2GCt--t23All0
ORF1ab/nsp385A85del2GCT--C13All0
ORF1ab/nsp385A85IGCTATC13All0
ORF1ab/nsp385A85VgCtgTt33AY.120.000948
ORF1ab/nsp385A85AgcTgcC33AY.190.003421
ORF1ab/nsp385A85VgCtgTt33AY.340.000291
ORF1ab/nsp385A85SGctTct33AY.390.000074
ORF1ab/nsp385A85DgCtgAt33AY.40.000005
ORF1ab/nsp385A85TGctAct33AY.450.000365
ORF1ab/nsp385A85AgcTgcC33AY.460.000312
ORF1ab/nsp385A85AgcTgcC33AY.46.20.001906
ORF1ab/nsp385A85VgCtgTt33AY.46.30.002801
ORF1ab/nsp385A85VgCtgTt33AY.5.40.00083
ORF1ab/nsp385A85AgcTgcC33AY.750.000168
ORF1ab/nsp385A85VgCtgTt33AY.770.003382
ORF1ab/nsp385A85VgCtgTt33AY.860.00249
ORF1ab/nsp385A85AgcTgcC33AY.880.002653
ORF1ab/nsp385A85VgCtgTt33AY.90.000203
ORF1ab/nsp385A85VgCtgTt33AY.920.000862
ORF1ab/nsp385A85delGCT---33B.10.000027
ORF1ab/nsp385A85AgcTgcC23B.10.000018
ORF1ab/nsp385A85AgcTgcG13B.10.000009
ORF1ab/nsp385A85SGctTct33B.1.10.000054
ORF1ab/nsp385A85PGcTCcG13B.1.10.000018
ORF1ab/nsp385A85PGcTCcA13B.1.10.000018
ORF1ab/nsp385A85PGcTCcC13B.1.10.000018
ORF1ab/nsp385A85delGCT---33B.1.1.330.001263
ORF1ab/nsp385A85DgCtgAt33B.1.1.3750.035714
ORF1ab/nsp385A85VgCtgTt33B.1.1.3890.018182
ORF1ab/nsp385A85VgCtgTt33B.1.1.390.001529
ORF1ab/nsp385A85VgCtgTt33B.1.1.560.053571
ORF1ab/nsp385A85DgCtgAt33B.1.1.70.000003
ORF1ab/nsp385A85VgCtgTt33B.1.1.700.001023
ORF1ab/nsp385A85VgCtgTt33B.1.110.30.002155
ORF1ab/nsp385A85VgCtgTt33B.1.1110.003525
ORF1ab/nsp385A85VgCtgTt33B.1.1260.003827
ORF1ab/nsp385A85TGctAct33B.1.177.190.004292
ORF1ab/nsp385A85VgCtgTt33B.1.177.450.001144
ORF1ab/nsp385A85AgcTgcC33B.1.177.880.037037
ORF1ab/nsp385A85VgCtgTt33B.1.3750.002459
ORF1ab/nsp385A85TGctAct33B.1.4290.000071
ORF1ab/nsp385A85VgCtgTt33B.1.4590.012245
ORF1ab/nsp385A85VgCtgTt33B.1.5440.018072
ORF1ab/nsp385A85VgCtgTt33B.1.5680.003333
ORF1ab/nsp385A85VgCtgTt33B.1.6250.007059
ORF1ab/nsp385A85VgCtgTt33C.180.007772
ORF1ab/nsp385A85VgCtgTt33C.60.111111
ORF1ab/nsp385A85AgcTgcC33P.1.140.000143
ORF1ab/nsp385A85SGctTct33P.1.20.003468
ORF1ab/nsp385A85VgCtgTt33Q.40.001364
ORF1ab/nsp385A85VgCtgTt33Q.80.000495
ORF1ab/nsp385A85IGCtATt220.111111
ORF1ab/nsp385A85SGCtAGt220.111111
ORF1ab/nsp385A85delGCT---220.111111
ORF1ab/nsp385A85VgCtgTt22A.2.50.000998
ORF1ab/nsp385A85VgCtgTt22AY.1060.00067
ORF1ab/nsp385A85VgCtgTt22AY.1160.000574
ORF1ab/nsp385A85AgcTgcC22AY.1200.000074
ORF1ab/nsp385A85SGctTct22AY.120.10.000642
ORF1ab/nsp385A85TGctAct22AY.140.000176
ORF1ab/nsp385A85VgCtgTt22AY.160.000759
ORF1ab/nsp385A85VgCtgTt22AY.16.10.00094
ORF1ab/nsp385A85VgCtgTt22AY.190.002281
ORF1ab/nsp385A85TGctAct22AY.250.000012
ORF1ab/nsp385A85VgCtgTt22AY.320.001065
ORF1ab/nsp385A85VgCtgTt22AY.4.2.10.000298
ORF1ab/nsp385A85delGCT---22AY.430.000009
ORF1ab/nsp385A85AgcTgcC22AY.46.10.002053
ORF1ab/nsp385A85AgcTgcC22AY.470.000062
ORF1ab/nsp385A85VgCtgTt22AY.5.30.000675
ORF1ab/nsp385A85VgCtgTt22AY.520.001629
ORF1ab/nsp385A85VgCtgTt22AY.540.000191
ORF1ab/nsp385A85VgCtgTt22AY.550.001835
ORF1ab/nsp385A85VgCtgTt22AY.560.00321
ORF1ab/nsp385A85AgcTgcC22AY.610.00021
ORF1ab/nsp385A85VgCtgTt22AY.690.000373
ORF1ab/nsp385A85VgCtgTt22AY.740.000231
ORF1ab/nsp385A85DgCtgAt22AY.75.10.000361
ORF1ab/nsp385A85TGctAct22AY.780.003082
ORF1ab/nsp385A85AgcTgcC22AY.840.000875
ORF1ab/nsp385A85VgCtgTt22AY.880.001768
ORF1ab/nsp385A85AgcTgcC22AY.930.000546
ORF1ab/nsp385A85AgcTgcC22AY.980.000158
ORF1ab/nsp385A85TGctAct22AY.99.20.000184
ORF1ab/nsp385A85VgCtgTt22B0.000256
ORF1ab/nsp385A85delGCT---22B.1.10.000036
ORF1ab/nsp385A85TGctAct22B.1.1.1700.002494
ORF1ab/nsp385A85VgCtgTt22B.1.1.1920.004619
ORF1ab/nsp385A85VgCtgTt22B.1.1.2290.011494
ORF1ab/nsp385A85AgcTgcC22B.1.1.2430.008163
ORF1ab/nsp385A85VgCtgTt22B.1.1.2840.000215
ORF1ab/nsp385A85TGctAct22B.1.1.2940.002532
ORF1ab/nsp385A85VgCtgTt22B.1.1.2940.002532
ORF1ab/nsp385A85VgCtgTt22B.1.1.3160.00185
ORF1ab/nsp385A85VgCtgTt22B.1.1.3170.000823
ORF1ab/nsp385A85VgCtgTt22B.1.1.3260.003521
ORF1ab/nsp385A85delGCT---22B.1.1.3480.001592
ORF1ab/nsp385A85VgCtgTt22B.1.1.3690.000892
ORF1ab/nsp385A85SGctTct22B.1.1.370.000386
ORF1ab/nsp385A85VgCtgTt22B.1.1.370.000386
ORF1ab/nsp385A85VgCtgTt22B.1.1.4160.00181
ORF1ab/nsp385A85VgCtgTt22B.1.1460.008475
ORF1ab/nsp385A85VgCtgTt22B.1.160.70.004158
ORF1ab/nsp385A85VgCtgTt22B.1.177.520.003515
ORF1ab/nsp385A85delGCT---22B.1.177.540.001213
ORF1ab/nsp385A85VgCtgTt22B.1.177.730.001133
ORF1ab/nsp385A85VgCtgTt22B.1.177.830.002963
ORF1ab/nsp385A85VgCtgTt22B.1.2060.001631
ORF1ab/nsp385A85VgCtgTt22B.1.2180.010309
ORF1ab/nsp385A85VgCtgTt22B.1.2290.019417
ORF1ab/nsp385A85VgCtgTt22B.1.258.170.000208
ORF1ab/nsp385A85VgCtgTt22B.1.36.290.001035
ORF1ab/nsp385A85VgCtgTt22B.1.4560.006536
ORF1ab/nsp385A85AgcTgcC22B.1.5410.00885
ORF1ab/nsp385A85VgCtgTt22B.1.5610.000794
ORF1ab/nsp385A85VgCtgTt22B.1.5660.038462
ORF1ab/nsp385A85VgCtgTt22B.1.5740.004301
ORF1ab/nsp385A85VgCtgTt22B.1.5950.000522
ORF1ab/nsp385A85VgCtgTt22B.1.617.10.000258
ORF1ab/nsp385A85delGCT---22N.60.014184
ORF1ab/nsp385A85delGCT---22P.10.000032
ORF1ab/nsp385A85VgCtgTt22P.1.120.000968
ORF1ab/nsp385A85VgCtgTt22P.1.170.000324
ORF1ab/nsp385A85AgcTgcC22P.1.170.000324
ORF1ab/nsp385A85VgCtgTt22P.1.20.002312
ORF1ab/nsp385A85VgCtgTt22P.30.00319
ORF1ab/nsp385A85VgCtgTt110.055556
ORF1ab/nsp385A85GgCtgGt110.055556
ORF1ab/nsp385A85VgCtgTt11A0.000387
ORF1ab/nsp385A85AgcTgcA11A.20.000662
ORF1ab/nsp385A85SGctTct11A.2.50.000499
ORF1ab/nsp385A85AgcTgcC11A.2.5.10.004808
ORF1ab/nsp385A85AgcTgcC11A.23.10.000704
ORF1ab/nsp385A85VgCtgTt11AH.30.003802
ORF1ab/nsp385A85del1gcTgc-11All0
ORF1ab/nsp385A85YGCtTAt11All0
ORF1ab/nsp385A85HGCtCAt11All0
ORF1ab/nsp385A85VgCtgTt11AY.10.000396
ORF1ab/nsp385A85delGCT---11AY.1000.000046
ORF1ab/nsp385A85AgcTgcC11AY.1000.000046
ORF1ab/nsp385A85VgCtgTt11AY.1010.00049
ORF1ab/nsp385A85PGctCct11AY.1020.000027
ORF1ab/nsp385A85VgCtgTt11AY.1050.000643
ORF1ab/nsp385A85AgcTgcC11AY.1100.000113
ORF1ab/nsp385A85VgCtgTt11AY.1110.000183
ORF1ab/nsp385A85VgCtgTt11AY.1140.000231
ORF1ab/nsp385A85TGctAct11AY.1160.000287
ORF1ab/nsp385A85VgCtgTt11AY.116.10.000311
ORF1ab/nsp385A85TGctAct11AY.1190.000035
ORF1ab/nsp385A85TGctAct11AY.1200.000037
ORF1ab/nsp385A85del1gcTgc-11AY.1200.000037
ORF1ab/nsp385A85HGCtCAt11AY.120.10.000321
ORF1ab/nsp385A85VgCtgTt11AY.120.10.000321
ORF1ab/nsp385A85YGCtTAt11AY.120.10.000321
ORF1ab/nsp385A85VgCtgTt11AY.1210.000135
ORF1ab/nsp385A85TGctAct11AY.200.000039
ORF1ab/nsp385A85TGctAct11AY.230.00007
ORF1ab/nsp385A85VgCtgTt11AY.240.000431
ORF1ab/nsp385A85delGCT---11AY.250.000006
ORF1ab/nsp385A85TGctAct11AY.270.000065
ORF1ab/nsp385A85VgCtgTt11AY.29.10.000221
ORF1ab/nsp385A85DgCtgAt11AY.30.00001
ORF1ab/nsp385A85del2GCt--t11AY.30.00001
ORF1ab/nsp385A85SGctTct11AY.30.00001
ORF1ab/nsp385A85AgcTgcC11AY.3.10.000085
ORF1ab/nsp385A85TGctAct11AY.330.000067
ORF1ab/nsp385A85AgcTgcC11AY.330.000067
ORF1ab/nsp385A85AgcTgcC11AY.350.000233
ORF1ab/nsp385A85VgCtgTt11AY.360.000148
ORF1ab/nsp385A85VgCtgTt11AY.39.20.001541
ORF1ab/nsp385A85SGctTct11AY.4.20.000022
ORF1ab/nsp385A85AgcTgcC11AY.4.20.000022
ORF1ab/nsp385A85TGctAct11AY.4.20.000022
ORF1ab/nsp385A85VgCtgTt11AY.4.40.000409
ORF1ab/nsp385A85VgCtgTt11AY.410.000294
ORF1ab/nsp385A85TGctAct11AY.420.00004
ORF1ab/nsp385A85delGCT---11AY.420.00004
ORF1ab/nsp385A85PGctCct11AY.430.000004
ORF1ab/nsp385A85delGCT---11AY.460.000104
ORF1ab/nsp385A85VgCtgTt11AY.46.20.000635
ORF1ab/nsp385A85TGctAct11AY.46.40.000165
ORF1ab/nsp385A85VgCtgTt11AY.46.40.000165
ORF1ab/nsp385A85VgCtgTt11AY.480.000465
ORF1ab/nsp385A85TGctAct11AY.50.000021
ORF1ab/nsp385A85AgcTgcC11AY.5.30.000337
ORF1ab/nsp385A85TGctAct11AY.5.40.000277
ORF1ab/nsp385A85AgcTgcC11AY.5.40.000277
ORF1ab/nsp385A85VgCtgTt11AY.530.000288
ORF1ab/nsp385A85AgcTgcC11AY.530.000288
ORF1ab/nsp385A85VgCtgTt11AY.570.000656
ORF1ab/nsp385A85SGctTct11AY.610.000105
ORF1ab/nsp385A85DgCtgAt11AY.620.000436
ORF1ab/nsp385A85VgCtgTt11AY.670.000464
ORF1ab/nsp385A85AgcTgcC11AY.690.000187
ORF1ab/nsp385A85VgCtgTt11AY.7.10.000113
ORF1ab/nsp385A85AgcTgcC11AY.730.000665
ORF1ab/nsp385A85VgCtgTt11AY.730.000665
ORF1ab/nsp385A85PGctCct11AY.750.000056
ORF1ab/nsp385A85AgcTgcC11AY.75.10.00018
ORF1ab/nsp385A85SGctTct11AY.75.10.00018
ORF1ab/nsp385A85TGctAct11AY.75.10.00018
ORF1ab/nsp385A85VgCtgTt11AY.760.004831
ORF1ab/nsp385A85VgCtgTt11AY.780.001541
ORF1ab/nsp385A85VgCtgTt11AY.800.001129
ORF1ab/nsp385A85VgCtgTt11AY.810.001992
ORF1ab/nsp385A85VgCtgTt11AY.840.000437
ORF1ab/nsp385A85VgCtgTt11AY.870.000833
ORF1ab/nsp385A85TGctAct11AY.9.10.000084
ORF1ab/nsp385A85AgcTgcC11AY.9.20.000037
ORF1ab/nsp385A85TGctAct11AY.920.000287
ORF1ab/nsp385A85VgCtgTt11AY.940.000443
ORF1ab/nsp385A85SGctTct11AY.980.000079
ORF1ab/nsp385A85VgCtgTt11AY.990.001049
ORF1ab/nsp385A85GgCTgGC11AY.990.001049
ORF1ab/nsp385A85delGCT---11AZ.20.000821
ORF1ab/nsp385A85delGCT---11B0.000128
ORF1ab/nsp385A85AgcTgcC11B0.000128
ORF1ab/nsp385A85GgCtgGt11B.10.000009
ORF1ab/nsp385A85VgCtgTt11B.1.1.1350.004695
ORF1ab/nsp385A85VgCtgTt11B.1.1.1530.001095
ORF1ab/nsp385A85VgCtgTt11B.1.1.170.016667
ORF1ab/nsp385A85VgCtgTt11B.1.1.1760.000439
ORF1ab/nsp385A85SGctTct11B.1.1.1940.00495
ORF1ab/nsp385A85VgCtgTt11B.1.1.2030.016949
ORF1ab/nsp385A85AgcTgcC11B.1.1.2160.00089
ORF1ab/nsp385A85VgCtgTt11B.1.1.2160.00089
ORF1ab/nsp385A85TGctAct11B.1.1.2220.000204
ORF1ab/nsp385A85VgCtgTt11B.1.1.2740.005051
ORF1ab/nsp385A85DgCtgAt11B.1.1.2910.000742
ORF1ab/nsp385A85VgCtgTt11B.1.1.3010.001179
ORF1ab/nsp385A85VgCtgTt11B.1.1.3020.002075
ORF1ab/nsp385A85DgCtgAt11B.1.1.3050.003861
ORF1ab/nsp385A85VgCtgTt11B.1.1.3060.000438
ORF1ab/nsp385A85VgCtgTt11B.1.1.3090.005848
ORF1ab/nsp385A85VgCtgTt11B.1.1.330.000421
ORF1ab/nsp385A85VgCtgTt11B.1.1.3480.000796
ORF1ab/nsp385A85VgCtgTt11B.1.1.3720.000689
ORF1ab/nsp385A85TGctAct11B.1.1.3720.000689
ORF1ab/nsp385A85VgCtgTt11B.1.1.4170.002703
ORF1ab/nsp385A85AgcTgcC11B.1.1.4200.001006
ORF1ab/nsp385A85VgCtgTt11B.1.1.4620.008621
ORF1ab/nsp385A85TGctAct11B.1.1.4660.008696
ORF1ab/nsp385A85VgCtgTt11B.1.1.5000.02
ORF1ab/nsp385A85AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp385A85TGctAct11B.1.1.5190.00004
ORF1ab/nsp385A85VgCtgTt11B.1.1.520.012195
ORF1ab/nsp385A85del2GCt--t11B.1.1.70.000001
ORF1ab/nsp385A85PGctCct11B.1.1.700.000341
ORF1ab/nsp385A85AgcTgcC11B.1.1.890.006061
ORF1ab/nsp385A85VgCtgTt11B.1.160.160.000929
ORF1ab/nsp385A85VgCtgTt11B.1.160.200.008929
ORF1ab/nsp385A85VgCtgTt11B.1.160.300.002976
ORF1ab/nsp385A85VgCtgTt11B.1.160.80.001289
ORF1ab/nsp385A85TGctAct11B.1.1770.000013
ORF1ab/nsp385A85SGctTct11B.1.1770.000013
ORF1ab/nsp385A85VgCtgTt11B.1.177.110.001698
ORF1ab/nsp385A85VgCtgTt11B.1.177.140.006098
ORF1ab/nsp385A85VgCtgTt11B.1.177.160.000664
ORF1ab/nsp385A85VgCtgTt11B.1.177.310.011494
ORF1ab/nsp385A85VgCtgTt11B.1.177.330.001645
ORF1ab/nsp385A85VgCtgTt11B.1.177.40.000211
ORF1ab/nsp385A85VgCtgTt11B.1.177.430.001477
ORF1ab/nsp385A85VgCtgTt11B.1.177.440.000519
ORF1ab/nsp385A85PGctCct11B.1.177.440.000519
ORF1ab/nsp385A85VgCtgTt11B.1.177.560.000668
ORF1ab/nsp385A85VgCtgTt11B.1.177.570.000281
ORF1ab/nsp385A85AgcTgcC11B.1.177.600.000218
ORF1ab/nsp385A85VgCtgTt11B.1.177.600.000218
ORF1ab/nsp385A85VgCtgTt11B.1.177.650.000665
ORF1ab/nsp385A85TGctAct11B.1.177.730.000566
ORF1ab/nsp385A85VgCtgTt11B.1.177.80.000752
ORF1ab/nsp385A85VgCtgTt11B.1.177.810.000189
ORF1ab/nsp385A85VgCtgTt11B.1.177.860.000183
ORF1ab/nsp385A85VgCtgTt11B.1.177.870.000728
ORF1ab/nsp385A85VgCtgTt11B.1.1820.007246
ORF1ab/nsp385A85VgCtgTt11B.1.1990.004132
ORF1ab/nsp385A85delGCT---11B.1.20.000009
ORF1ab/nsp385A85del2GCT--C11B.1.20.000009
ORF1ab/nsp385A85IGCTATC11B.1.20.000009
ORF1ab/nsp385A85VgCtgTt11B.1.2140.003663
ORF1ab/nsp385A85VgCtgTt11B.1.220.001318
ORF1ab/nsp385A85GgCtgGt11B.1.2210.000071
ORF1ab/nsp385A85SGctTct11B.1.2320.000537
ORF1ab/nsp385A85VgCtgTt11B.1.2330.014085
ORF1ab/nsp385A85SGctTct11B.1.2360.002053
ORF1ab/nsp385A85SGctTct11B.1.2400.000216
ORF1ab/nsp385A85VgCtgTt11B.1.258.140.00098
ORF1ab/nsp385A85SGctTct11B.1.258.70.001912
ORF1ab/nsp385A85TGctAct11B.1.2650.001271
ORF1ab/nsp385A85VgCtgTt11B.1.2890.00266
ORF1ab/nsp385A85VgCtgTt11B.1.2980.002114
ORF1ab/nsp385A85AgcTgcC11B.1.3110.000275
ORF1ab/nsp385A85SGctTct11B.1.3190.003049
ORF1ab/nsp385A85SGctTct11B.1.3380.008621
ORF1ab/nsp385A85delGCT---11B.1.3490.000715
ORF1ab/nsp385A85AgcTgcA11B.1.360.000146
ORF1ab/nsp385A85VgCtgTt11B.1.36.170.000494
ORF1ab/nsp385A85TGctAct11B.1.36.230.016393
ORF1ab/nsp385A85TGctAct11B.1.36.260.002857
ORF1ab/nsp385A85SGctTct11B.1.36.290.000517
ORF1ab/nsp385A85AgcTgcC11B.1.36.80.001
ORF1ab/nsp385A85VgCtgTt11B.1.3690.000285
ORF1ab/nsp385A85VgCtgTt11B.1.3710.001122
ORF1ab/nsp385A85VgCtgTt11B.1.4000.000429
ORF1ab/nsp385A85AgcTgcC11B.1.4030.003268
ORF1ab/nsp385A85VgCtgTt11B.1.4040.001302
ORF1ab/nsp385A85TGctAct11B.1.4160.001269
ORF1ab/nsp385A85VgCtgTt11B.1.4160.001269
ORF1ab/nsp385A85delGCT---11B.1.416.10.001563
ORF1ab/nsp385A85VgCtgTt11B.1.4280.00102
ORF1ab/nsp385A85delGCT---11B.1.4290.000024
ORF1ab/nsp385A85VgCtgTt11B.1.429.10.012048
ORF1ab/nsp385A85SGctTct11B.1.4380.006536
ORF1ab/nsp385A85SGctTct11B.1.438.10.000107
ORF1ab/nsp385A85AgcTgcC11B.1.438.10.000107
ORF1ab/nsp385A85VgCtgTt11B.1.4520.013699
ORF1ab/nsp385A85SGctTct11B.1.4530.003236
ORF1ab/nsp385A85VgCtgTt11B.1.466.20.000391
ORF1ab/nsp385A85TGctAct11B.1.4740.001901
ORF1ab/nsp385A85AgcTgcC11B.1.5170.000427
ORF1ab/nsp385A85TGctAct11B.1.5240.001406
ORF1ab/nsp385A85VgCtgTt11B.1.5550.022222
ORF1ab/nsp385A85delGCT---11B.1.5610.000397
ORF1ab/nsp385A85VgCtgTt11B.1.5640.000426
ORF1ab/nsp385A85VgCtgTt11B.1.5760.000907
ORF1ab/nsp385A85TGctAct11B.1.5770.000687
ORF1ab/nsp385A85delGCT---11B.1.5770.000687
ORF1ab/nsp385A85VgCtgTt11B.1.5800.004065
ORF1ab/nsp385A85SGctTct11B.1.5960.000087
ORF1ab/nsp385A85PGctCct11B.1.5960.000087
ORF1ab/nsp385A85VgCtgTt11B.1.6090.000479
ORF1ab/nsp385A85VgCtgTt11B.1.619.10.000641
ORF1ab/nsp385A85VgCtgTt11B.1.621.10.000506
ORF1ab/nsp385A85VgCtgTt11B.1.6230.000536
ORF1ab/nsp385A85VgCtgTt11B.1.6280.000352
ORF1ab/nsp385A85VgCtgTt11B.1.780.008547
ORF1ab/nsp385A85TGctAct11B.1.9.40.006135
ORF1ab/nsp385A85VgCtgTt11B.230.002924
ORF1ab/nsp385A85VgCtgTt11B.310.003731
ORF1ab/nsp385A85PGctCct11B.390.002331
ORF1ab/nsp385A85SGctTct11B.400.000364
ORF1ab/nsp385A85VgCtgTt11B.60.00091
ORF1ab/nsp385A85VgCtgTt11C.260.007353
ORF1ab/nsp385A85VgCtgTt11C.350.000774
ORF1ab/nsp385A85VgCtgTt11C.36.30.000567
ORF1ab/nsp385A85AgcTgcC11C.370.000116
ORF1ab/nsp385A85TGctAct11C.370.000116
ORF1ab/nsp385A85TGctAct11D.20.000075
ORF1ab/nsp385A85SGctTct11D.30.005917
ORF1ab/nsp385A85SGctTct11P.10.000016
ORF1ab/nsp385A85GgCtgGt11P.10.000016
ORF1ab/nsp385A85TGctAct11P.10.000016
ORF1ab/nsp385A85VgCtgTt11P.1.100.000269
ORF1ab/nsp385A85SGctTct11P.20.000187
ORF1ab/nsp385A85VgCtgTt11P.60.003145
ORF1ab/nsp385A85VgCtgTt11Q.30.000145
ORF1ab/nsp385A85SGctTct11R.10.00009