CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 848 & Codon = tcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3848S848SS1666SsyntcTtcC4523970.8783195261-5263

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3848S848StcTtcC397452All0.000076
ORF1ab/nsp3848S848StcTtcC211211B.1.6180.850806
ORF1ab/nsp3848S848StcTtcC2159B.1.617.10.002708
ORF1ab/nsp3848S848StcTtcC4040B.1.20.000352
ORF1ab/nsp3848S848StcTtcC2828AY.430.000124
ORF1ab/nsp3848S848StcTtcC1521AY.40.000023
ORF1ab/nsp3848S848StcTtcC1820B.1.617.20.000068
ORF1ab/nsp3848S848StcTtcC1414B.1.5820.006869
ORF1ab/nsp3848S848StcTtcC1010C.160.010604
ORF1ab/nsp3848S848StcTtcC44AY.470.000124
ORF1ab/nsp3848S848StcTtcC34B.1.1.70.000003
ORF1ab/nsp3848S848StcTtcC33AY.5.40.00083
ORF1ab/nsp3848S848StcTtcC23B.10.000018
ORF1ab/nsp3848S848StcTtcC33B.1.10.000054
ORF1ab/nsp3848S848StcTtcC12AY.1030.000006
ORF1ab/nsp3848S848StcTtcC22AY.250.000012
ORF1ab/nsp3848S848StcTtcC22AY.460.000208
ORF1ab/nsp3848S848StcTtcC11AY.1020.000027
ORF1ab/nsp3848S848StcTtcC11AY.1190.000035
ORF1ab/nsp3848S848StcTtcC11AY.230.00007
ORF1ab/nsp3848S848StcTtcC11AY.340.000097
ORF1ab/nsp3848S848StcTtcC11AY.4.20.000022
ORF1ab/nsp3848S848StcTtcC11AY.4.40.000409
ORF1ab/nsp3848S848StcTtcC11AY.9.20.000037
ORF1ab/nsp3848S848StcTtcC11B0.000128
ORF1ab/nsp3848S848StcTtcC11B.1.1.470.005348
ORF1ab/nsp3848S848StcTtcC11B.1.1.5190.00004
ORF1ab/nsp3848S848StcTtcC11B.1.1570.002985
ORF1ab/nsp3848S848StcTtcC11B.1.1600.000031
ORF1ab/nsp3848S848StcTtcC11B.1.2210.000071
ORF1ab/nsp3848S848StcTtcC11B.1.2580.000067
ORF1ab/nsp3848S848StcTtcC11B.1.360.000146
ORF1ab/nsp3848S848StcTtcC11B.1.3910.001127
ORF1ab/nsp3848S848StcTtcC11B.1.5640.000426
ORF1ab/nsp3848S848StcTtcC11B.1.5650.00081
ORF1ab/nsp3848S848StcTtcC11B.1.6210.000089
ORF1ab/nsp3848S848StcTtcC11P.1.120.000484