CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 825 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3825L825LL1643LsynctGctT1621524670.1521435192-5194

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3825L825LctGctT246716215All0.000472
ORF1ab/nsp3825L825LctGctT2582280B.1.1.70.000231
ORF1ab/nsp3825L825LctGctT31388B.1.6210.000266
ORF1ab/nsp3825L825LctGctT338899AY.40.000526
ORF1ab/nsp3825L825LctGctT608608B.1.1.700.207367
ORF1ab/nsp3825L825LctGctT109493B.1.617.20.00041
ORF1ab/nsp3825L825LctGctT2461B.1.1600.000062
ORF1ab/nsp3825L825LctGctT4445R.10.00036
ORF1ab/nsp3825L825LctGctT84294AY.430.000372
ORF1ab/nsp3825L825LctGctT27286AY.1030.000168
ORF1ab/nsp3825L825LctGctT76261B.1.20.000669
ORF1ab/nsp3825L825LctGctT14248AY.50.000289
ORF1ab/nsp3825L825LctGctT20225AY.250.00012
ORF1ab/nsp3825L825LctGctT68156B.10.000623
ORF1ab/nsp3825L825LctGctT15117B.1.1770.000198
ORF1ab/nsp3825L825LctGctT37109AY.440.000225
ORF1ab/nsp3825L825LctGctT102106C.370.011838
ORF1ab/nsp3825L825LctGctT485AY.260.000113
ORF1ab/nsp3825L825LctGctT6085B.1.5250.00679
ORF1ab/nsp3825L825LctGctT2884P.10.000441
ORF1ab/nsp3825L825LctGctT4478AY.470.001369
ORF1ab/nsp3825L825LctGctT1072B.1.2430.000696
ORF1ab/nsp3825L825LctGctT1670B.1.10.00029
ORF1ab/nsp3825L825LctGctT357AY.200.000117
ORF1ab/nsp3825L825LctGctT5757P.1.160.021324
ORF1ab/nsp3825L825LctGctT850AY.750.000448
ORF1ab/nsp3825L825LctGctT1147AY.99.20.001014
ORF1ab/nsp3825L825LctGctT4444B.1.1.4320.055696
ORF1ab/nsp3825L825LctGctT1242AY.30.000119
ORF1ab/nsp3825L825LctGctT537AY.390.000124
ORF1ab/nsp3825L825LctGctT934AY.1020.000239
ORF1ab/nsp3825L825LctGctT433AY.1200.000149
ORF1ab/nsp3825L825LctGctT532B.1.1.5190.000199
ORF1ab/nsp3825L825LctGctT231AY.1000.000092
ORF1ab/nsp3825L825LctGctT1029B.1.2210.00071
ORF1ab/nsp3825L825LctGctT427AY.230.000279
ORF1ab/nsp3825L825LctGctT827B.1.4290.000188
ORF1ab/nsp3825L825LctGctT826AY.610.000838
ORF1ab/nsp3825L825LctGctT1021AY.4.20.000217
ORF1ab/nsp3825L825LctGctT421AY.46.40.000658
ORF1ab/nsp3825L825LctGctT520AY.75.10.000902
ORF1ab/nsp3825L825LctGctT919B.1.4270.000454
ORF1ab/nsp3825L825LctGctT1519B.1.5260.000353
ORF1ab/nsp3825L825LctGctT118AY.420.00004
ORF1ab/nsp3825L825LctGctT1518B.1.438.10.001609
ORF1ab/nsp3825L825LctGctT116AY.360.000148
ORF1ab/nsp3825L825LctGctT116AY.60.000041
ORF1ab/nsp3825L825LctGctT1316AY.880.011494
ORF1ab/nsp3825L825LctGctT516P.1.140.000239
ORF1ab/nsp3825L825LctGctT515B.1.2580.000333
ORF1ab/nsp3825L825LctGctT415B.1.3510.000119
ORF1ab/nsp3825L825LctGctT214AY.290.000032
ORF1ab/nsp3825L825LctGctT114AY.4.50.000107
ORF1ab/nsp3825L825LctGctT814AY.46.60.000578
ORF1ab/nsp3825L825LctGctT713AY.330.000467
ORF1ab/nsp3825L825LctGctT613AY.460.000624
ORF1ab/nsp3825L825LctGctT113B.1.617.10.000129
ORF1ab/nsp3825L825LctGctT1313C.201
ORF1ab/nsp3825L825LctGctT112B.1.6230.000536
ORF1ab/nsp3825L825LctGctT911AY.120.10.002889
ORF1ab/nsp3825L825LctGctT411AY.1210.000541
ORF1ab/nsp3825L825LctGctT511B.1.1.630.001929
ORF1ab/nsp3825L825LctGctT610B.1.1.280.001867
ORF1ab/nsp3825L825LctGctT110Q.10.000126
ORF1ab/nsp3825L825LctGctT18B.1.258.170.000104
ORF1ab/nsp3825L825LctGctT28B.1.360.000292
ORF1ab/nsp3825L825LctGctT18Q.40.000455
ORF1ab/nsp3825L825LctGctT37AY.1190.000106
ORF1ab/nsp3825L825LctGctT57AY.39.10.000198
ORF1ab/nsp3825L825LctGctT27B.1.1.2940.002532
ORF1ab/nsp3825L825LctGctT77B.1.177.280.051852
ORF1ab/nsp3825L825LctGctT77B.1.177.510.031963
ORF1ab/nsp3825L825LctGctT16AY.1180.000063
ORF1ab/nsp3825L825LctGctT16AY.140.000088
ORF1ab/nsp3825L825LctGctT56AY.16.10.00235
ORF1ab/nsp3825L825LctGctT66AY.46.20.003812
ORF1ab/nsp3825L825LctGctT16AY.46.50.000198
ORF1ab/nsp3825L825LctGctT66AY.7.10.000676
ORF1ab/nsp3825L825LctGctT56AY.740.000578
ORF1ab/nsp3825L825LctGctT66B.1.3770.027397
ORF1ab/nsp3825L825LctGctT16D.20.000075
ORF1ab/nsp3825L825LctGctT46P.1.170.000647
ORF1ab/nsp3825L825LctGctT46P.20.000747
ORF1ab/nsp3825L825LctGctT15AY.3.10.000085
ORF1ab/nsp3825L825LctGctT45AY.46.10.004107
ORF1ab/nsp3825L825LctGctT35AY.690.00056
ORF1ab/nsp3825L825LctGctT35AY.850.001282
ORF1ab/nsp3825L825LctGctT25B.1.1.2220.000408
ORF1ab/nsp3825L825LctGctT25B.1.1.250.001137
ORF1ab/nsp3825L825LctGctT15B.1.1.4340.000349
ORF1ab/nsp3825L825LctGctT55B.1.160.280.01462
ORF1ab/nsp3825L825LctGctT44A0.001548
ORF1ab/nsp3825L825LctGctT14AY.130.000161
ORF1ab/nsp3825L825LctGctT24AY.540.000191
ORF1ab/nsp3825L825LctGctT44B.1.5700.011765
ORF1ab/nsp3825L825LctGctT44B.6.60.003556
ORF1ab/nsp3825L825LctGctT14Q.80.000165
ORF1ab/nsp3825L825LctGctT23A.280.005291
ORF1ab/nsp3825L825LctGctT33AD.20.000657
ORF1ab/nsp3825L825LctGctT13AY.4.2.10.000149
ORF1ab/nsp3825L825LctGctT13AY.410.000294
ORF1ab/nsp3825L825LctGctT13AY.680.000274
ORF1ab/nsp3825L825LctGctT33AY.770.003382
ORF1ab/nsp3825L825LctGctT13AY.9.10.000084
ORF1ab/nsp3825L825LctGctT33B.1.1.4650.046875
ORF1ab/nsp3825L825LctGctT33B.1.110.30.002155
ORF1ab/nsp3825L825LctGctT33B.1.351.20.000908
ORF1ab/nsp3825L825LctGctT13P.1.10.000318
ORF1ab/nsp3825L825LctGctT33P.1.90.014423
ORF1ab/nsp3825L825LctGctT12A.2.50.000499
ORF1ab/nsp3825L825LctGctT22AP.10.003003
ORF1ab/nsp3825L825LctGctT12AY.1010.00049
ORF1ab/nsp3825L825LctGctT12AY.160.00038
ORF1ab/nsp3825L825LctGctT22AY.23.10.000835
ORF1ab/nsp3825L825LctGctT12AY.320.000532
ORF1ab/nsp3825L825LctGctT12AY.940.000443
ORF1ab/nsp3825L825LctGctT12B.1.1.2140.000055
ORF1ab/nsp3825L825LctGctT22B.1.1.3480.001592
ORF1ab/nsp3825L825LctGctT12B.1.1390.000733
ORF1ab/nsp3825L825LctGctT22B.1.243.10.044444
ORF1ab/nsp3825L825LctGctT12B.1.3200.001245
ORF1ab/nsp3825L825LctGctT22B.1.4700.002809
ORF1ab/nsp3825L825LctGctT22B.1.4800.004975
ORF1ab/nsp3825L825LctGctT22B.1.4970.00063
ORF1ab/nsp3825L825LctGctT12B.1.5610.000397
ORF1ab/nsp3825L825LctGctT22C.160.002121
ORF1ab/nsp3825L825LctGctT11A.20.000662
ORF1ab/nsp3825L825LctGctT11AY.1080.001103
ORF1ab/nsp3825L825LctGctT11AY.110.001339
ORF1ab/nsp3825L825LctGctT11AY.1140.000231
ORF1ab/nsp3825L825LctGctT11AY.370.000316
ORF1ab/nsp3825L825LctGctT11AY.4.30.000842
ORF1ab/nsp3825L825LctGctT11AY.480.000465
ORF1ab/nsp3825L825LctGctT11AY.500.000799
ORF1ab/nsp3825L825LctGctT11AY.530.000288
ORF1ab/nsp3825L825LctGctT11AY.570.000656
ORF1ab/nsp3825L825LctGctT11AY.970.001701
ORF1ab/nsp3825L825LctGctT11B.1.1.100.001115
ORF1ab/nsp3825L825LctGctT11B.1.1.1980.001468
ORF1ab/nsp3825L825LctGctT11B.1.1.2800.003086
ORF1ab/nsp3825L825LctGctT11B.1.1.2830.023256
ORF1ab/nsp3825L825LctGctT11B.1.1.2890.002083
ORF1ab/nsp3825L825LctGctT11B.1.1.3070.002532
ORF1ab/nsp3825L825LctGctT11B.1.1.3160.000925
ORF1ab/nsp3825L825LctGctT11B.1.1.3180.000302
ORF1ab/nsp3825L825LctGctT11B.1.1.3260.001761
ORF1ab/nsp3825L825LctGctT11B.1.1.3910.008547
ORF1ab/nsp3825L825LctGctT11B.1.1430.021277
ORF1ab/nsp3825L825LctGctT11B.1.160.160.000929
ORF1ab/nsp3825L825LctGctT11B.1.177.100.000878
ORF1ab/nsp3825L825LctGctT11B.1.177.690.001484
ORF1ab/nsp3825L825LctGctT11B.1.2410.000812
ORF1ab/nsp3825L825LctGctT11B.1.2470.014925
ORF1ab/nsp3825L825LctGctT11B.1.36.10.00114
ORF1ab/nsp3825L825LctGctT11B.1.36.220.001208
ORF1ab/nsp3825L825LctGctT11B.1.36.290.000517
ORF1ab/nsp3825L825LctGctT11B.1.36.80.001
ORF1ab/nsp3825L825LctGctT11B.1.4360.001029
ORF1ab/nsp3825L825LctGctT11B.1.4510.008197
ORF1ab/nsp3825L825LctGctT11B.1.4520.013699
ORF1ab/nsp3825L825LctGctT11B.1.4620.007246
ORF1ab/nsp3825L825LctGctT11B.1.5030.002488
ORF1ab/nsp3825L825LctGctT11B.1.5160.001957
ORF1ab/nsp3825L825LctGctT11B.1.5460.003704
ORF1ab/nsp3825L825LctGctT11B.1.575.10.002439
ORF1ab/nsp3825L825LctGctT11B.1.90.006173
ORF1ab/nsp3825L825LctGctT11C.260.007353
ORF1ab/nsp3825L825LctGctT11P.1.120.000484
ORF1ab/nsp3825L825LctGctT11P.60.003145