CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 822 & Codon = -ct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3822P822del1P1640del1delCct-ct1290.755183-5185

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3822P822del1Cct-ct912All0.000002
ORF1ab/nsp3822P822del1Cct-ct22P.10.000032
ORF1ab/nsp3822P822del1Cct-ct11AY.120.10.000321
ORF1ab/nsp3822P822del1Cct-ct11AY.440.000006
ORF1ab/nsp3822P822del1Cct-ct11AY.500.000799
ORF1ab/nsp3822P822del1Cct-ct11AY.9.20.000037
ORF1ab/nsp3822P822del1Cct-ct11B.10.000009
ORF1ab/nsp3822P822del1Cct-ct11B.1.1.70.000001
ORF1ab/nsp3822P822del1Cct-ct11B.1.617.10.000129