CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 820

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3820T820IT1638InonsynaCtaTt2495249515177-5179
ORF1ab/nsp3820T820TT1638TsynacTacC8216970.8489655177-5179
ORF1ab/nsp3820T820TT1638TsynacTacA821970.1181495177-5179
ORF1ab/nsp3820T820TT1638TsynacTacG821270.03288675177-5179
ORF1ab/nsp3820T820NT1638NnonsynaCtaAt23823815177-5179
ORF1ab/nsp3820T820delT1638deldelACT---717115177-5179
ORF1ab/nsp3820T820AT1638AnonsynActGct646415177-5179
ORF1ab/nsp3820T820PT1638PnonsynActCct252515177-5179
ORF1ab/nsp3820T820ST1638SnonsynaCtaGt840.55177-5179
ORF1ab/nsp3820T820ST1638SnonsynActTct840.55177-5179
ORF1ab/nsp3820T820VT1638VnonsynACtGTt3315177-5179
ORF1ab/nsp3820T820HT1638HnonsynACtCAt2215177-5179
ORF1ab/nsp3820T820LT1638LnonsynACtCTt2215177-5179
ORF1ab/nsp3820T820del2T1638del2delACt--t1115177-5179
ORF1ab/nsp3820T820CT1638CnonsynACtTGt1115177-5179
ORF1ab/nsp3820T820del1T1638del1delACt-Tt1115177-5179

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3820T820IaCtaTt24952495All0.000477
ORF1ab/nsp3820T820IaCtaTt955955B.1.1.4200.960765
ORF1ab/nsp3820T820TacTacC697821All0.000133
ORF1ab/nsp3820T820TacTacA97821All0.000019
ORF1ab/nsp3820T820TacTacG27821All0.000005
ORF1ab/nsp3820T820TacTacC470474AY.40.000732
ORF1ab/nsp3820T820TacTacA2474AY.40.000003
ORF1ab/nsp3820T820TacTacG2474AY.40.000003
ORF1ab/nsp3820T820NaCtaAt238238All0.000046
ORF1ab/nsp3820T820IaCtaTt237237AY.30.002357
ORF1ab/nsp3820T820IaCtaTt198198B.1.1.70.000177
ORF1ab/nsp3820T820IaCtaTt114114B.10.001044
ORF1ab/nsp3820T820IaCtaTt101101B.1.10.001832
ORF1ab/nsp3820T820IaCtaTt9292B.1.20.00081
ORF1ab/nsp3820T820delACT---7171All0.000014
ORF1ab/nsp3820T820IaCtaTt7171B.1.6290.946667
ORF1ab/nsp3820T820IaCtaTt7070AY.40.000109
ORF1ab/nsp3820T820NaCtaAt6868B.1.1.70.000061
ORF1ab/nsp3820T820AActGct6464All0.000012
ORF1ab/nsp3820T820IaCtaTt5050AY.4.20.001084
ORF1ab/nsp3820T820IaCtaTt4747B.1.617.20.000177
ORF1ab/nsp3820T820TacTacA2746B.1.1.70.000024
ORF1ab/nsp3820T820TacTacC1946B.1.1.70.000017
ORF1ab/nsp3820T820IaCtaTt4444B.1.1770.000579
ORF1ab/nsp3820T820TacTacC4142AY.1030.000255
ORF1ab/nsp3820T820TacTacG142AY.1030.000006
ORF1ab/nsp3820T820IaCtaTt4141B.1.6161
ORF1ab/nsp3820T820TacTacC3840B.1.617.20.000143
ORF1ab/nsp3820T820TacTacA140B.1.617.20.000004
ORF1ab/nsp3820T820TacTacG140B.1.617.20.000004
ORF1ab/nsp3820T820PActCct2525All0.000005
ORF1ab/nsp3820T820IaCtaTt2424B.1.1.5150.48
ORF1ab/nsp3820T820IaCtaTt2222B.1.1490.075342
ORF1ab/nsp3820T820IaCtaTt2020B.1.1600.000624
ORF1ab/nsp3820T820TacTacC1720B.1.5260.0004
ORF1ab/nsp3820T820TacTacA320B.1.5260.000071
ORF1ab/nsp3820T820AActGct2020P.10.000315
ORF1ab/nsp3820T820TacTacC1718B.1.1.3150.144068
ORF1ab/nsp3820T820TacTacA118B.1.1.3150.008475
ORF1ab/nsp3820T820IaCtaTt1717B.1.6330.708333
ORF1ab/nsp3820T820NaCtaAt1616AY.470.000498
ORF1ab/nsp3820T820NaCtaAt1616B.1.20.000141
ORF1ab/nsp3820T820IaCtaTt1515AY.1030.000093
ORF1ab/nsp3820T820AActGct1515B.1.1.70.000013
ORF1ab/nsp3820T820delACT---1515B.1.1.70.000013
ORF1ab/nsp3820T820NaCtaAt1414B.1.2580.000932
ORF1ab/nsp3820T820IaCtaTt1313AY.140.001144
ORF1ab/nsp3820T820TacTacA1313B.1.6210.001151
ORF1ab/nsp3820T820IaCtaTt1212A0.004644
ORF1ab/nsp3820T820delACT---1212B.10.00011
ORF1ab/nsp3820T820IaCtaTt1111AY.250.000066
ORF1ab/nsp3820T820NaCtaAt1111AY.40.000017
ORF1ab/nsp3820T820TacTacC911B.10.000082
ORF1ab/nsp3820T820TacTacA111B.10.000009
ORF1ab/nsp3820T820TacTacG111B.10.000009
ORF1ab/nsp3820T820TacTacC1111B.1.6370.000804
ORF1ab/nsp3820T820TacTacG1010AY.1160.002868
ORF1ab/nsp3820T820TacTacA810AY.430.000035
ORF1ab/nsp3820T820TacTacC210AY.430.000009
ORF1ab/nsp3820T820IaCtaTt1010AY.440.000061
ORF1ab/nsp3820T820TacTacA1010AY.690.001867
ORF1ab/nsp3820T820IaCtaTt1010B.1.258.170.00104
ORF1ab/nsp3820T820NaCtaAt1010B.1.617.20.000038
ORF1ab/nsp3820T820SActTct48All0.000001
ORF1ab/nsp3820T820SaCtaGt48All0.000001
ORF1ab/nsp3820T820TacTacA58AY.250.00003
ORF1ab/nsp3820T820TacTacC38AY.250.000018
ORF1ab/nsp3820T820PActCct88AY.430.000035
ORF1ab/nsp3820T820IaCtaTt88AY.430.000035
ORF1ab/nsp3820T820NaCtaAt88AY.440.000049
ORF1ab/nsp3820T820NaCtaAt88B.10.000073
ORF1ab/nsp3820T820IaCtaTt88B.1.2210.000568
ORF1ab/nsp3820T820IaCtaTt88B.1.2580.000532
ORF1ab/nsp3820T820IaCtaTt88P.10.000126
ORF1ab/nsp3820T820IaCtaTt77AY.1190.000247
ORF1ab/nsp3820T820IaCtaTt77AY.390.000173
ORF1ab/nsp3820T820IaCtaTt77AY.39.10.000277
ORF1ab/nsp3820T820IaCtaTt77AY.450.000852
ORF1ab/nsp3820T820IaCtaTt77B0.000895
ORF1ab/nsp3820T820IaCtaTt77B.1.2430.000487
ORF1ab/nsp3820T820TacTacC46AY.30.00004
ORF1ab/nsp3820T820TacTacA26AY.30.00002
ORF1ab/nsp3820T820IaCtaTt66B.1.4290.000141
ORF1ab/nsp3820T820TacTacC36B.1.4290.000071
ORF1ab/nsp3820T820TacTacA36B.1.4290.000071
ORF1ab/nsp3820T820TacTacC55AY.16.10.00235
ORF1ab/nsp3820T820NaCtaAt55AY.290.000079
ORF1ab/nsp3820T820delACT---55B.1.10.000091
ORF1ab/nsp3820T820IaCtaTt55B.1.1.2320.009074
ORF1ab/nsp3820T820NaCtaAt55B.1.1600.000156
ORF1ab/nsp3820T820IaCtaTt55B.1.36.290.002587
ORF1ab/nsp3820T820IaCtaTt55B.1.4270.000252
ORF1ab/nsp3820T820IaCtaTt55B.1.5260.000118
ORF1ab/nsp3820T820IaCtaTt55B.4.50.059524
ORF1ab/nsp3820T820IaCtaTt44AE.80.001956
ORF1ab/nsp3820T820IaCtaTt44AY.1140.000924
ORF1ab/nsp3820T820IaCtaTt44AY.1200.000149
ORF1ab/nsp3820T820TacTacA34AY.260.000085
ORF1ab/nsp3820T820TacTacC14AY.260.000028
ORF1ab/nsp3820T820NaCtaAt44B.1.10.000073
ORF1ab/nsp3820T820IaCtaTt44B.1.1.280.001245
ORF1ab/nsp3820T820SaCtaGt44B.1.1490.013699
ORF1ab/nsp3820T820TacTacC34B.1.20.000026
ORF1ab/nsp3820T820TacTacA14B.1.20.000009
ORF1ab/nsp3820T820TacTacC44B.1.2580.000266
ORF1ab/nsp3820T820IaCtaTt44B.1.3510.000119
ORF1ab/nsp3820T820IaCtaTt44B.1.4700.005618
ORF1ab/nsp3820T820IaCtaTt44B.1.5960.000349
ORF1ab/nsp3820T820IaCtaTt44B.1.6190.003484
ORF1ab/nsp3820T820TacTacG44B.1.6190.003484
ORF1ab/nsp3820T820IaCtaTt44B.1.6210.000354
ORF1ab/nsp3820T820IaCtaTt44B.1.621.10.002023
ORF1ab/nsp3820T820IaCtaTt44B.1.930.003735
ORF1ab/nsp3820T820TacTacG44C.230.023256
ORF1ab/nsp3820T820IaCtaTt33A.20.001985
ORF1ab/nsp3820T820IaCtaTt33AH.30.011407
ORF1ab/nsp3820T820VACtGTt33All0.000001
ORF1ab/nsp3820T820IaCtaTt33AY.1000.000138
ORF1ab/nsp3820T820IaCtaTt33AY.230.000209
ORF1ab/nsp3820T820TacTacC33AY.290.000047
ORF1ab/nsp3820T820NaCtaAt33AY.30.00003
ORF1ab/nsp3820T820IaCtaTt33AY.330.0002
ORF1ab/nsp3820T820TacTacC33AY.350.000699
ORF1ab/nsp3820T820AActGct33AY.390.000074
ORF1ab/nsp3820T820delACT---33AY.40.000005
ORF1ab/nsp3820T820delACT---33AY.430.000013
ORF1ab/nsp3820T820TacTacC33AY.440.000018
ORF1ab/nsp3820T820IaCtaTt33AY.60.000123
ORF1ab/nsp3820T820AActGct33B.10.000027
ORF1ab/nsp3820T820TacTacA23B.1.10.000036
ORF1ab/nsp3820T820TacTacC13B.1.10.000018
ORF1ab/nsp3820T820IaCtaTt33B.1.1.10.00098
ORF1ab/nsp3820T820IaCtaTt33B.1.1.4340.001046
ORF1ab/nsp3820T820TacTacC33B.1.1.5190.000119
ORF1ab/nsp3820T820NaCtaAt33B.1.1770.00004
ORF1ab/nsp3820T820TacTacC33B.1.1770.00004
ORF1ab/nsp3820T820IaCtaTt33B.1.177.430.004431
ORF1ab/nsp3820T820IaCtaTt33B.1.177.800.005736
ORF1ab/nsp3820T820NaCtaAt33B.1.2210.000213
ORF1ab/nsp3820T820PActCct33B.1.2580.0002
ORF1ab/nsp3820T820AActGct33B.1.2580.0002
ORF1ab/nsp3820T820NaCtaAt33B.1.258.170.000312
ORF1ab/nsp3820T820IaCtaTt33B.1.360.000438
ORF1ab/nsp3820T820delACT---33B.1.617.20.000011
ORF1ab/nsp3820T820IaCtaTt33C.370.000348
ORF1ab/nsp3820T820TacTacC33C.370.000348
ORF1ab/nsp3820T820TacTacC23P.10.000032
ORF1ab/nsp3820T820TacTacA13P.10.000016
ORF1ab/nsp3820T820NaCtaAt33P.1.140.000143
ORF1ab/nsp3820T820NaCtaAt33P.1.150.000697
ORF1ab/nsp3820T820delACT---220.111111
ORF1ab/nsp3820T820IaCtaTt22A.23.10.001408
ORF1ab/nsp3820T820IaCtaTt22AA.10.014493
ORF1ab/nsp3820T820NaCtaAt22AH.30.007605
ORF1ab/nsp3820T820HACtCAt22All0
ORF1ab/nsp3820T820LACtCTt22All0
ORF1ab/nsp3820T820IaCtaTt22AT.10.010256
ORF1ab/nsp3820T820IaCtaTt22AY.1020.000053
ORF1ab/nsp3820T820AActGct22AY.1030.000012
ORF1ab/nsp3820T820TacTacC22AY.1180.000125
ORF1ab/nsp3820T820IaCtaTt22AY.1180.000125
ORF1ab/nsp3820T820NaCtaAt22AY.1190.000071
ORF1ab/nsp3820T820TacTacA12AY.1190.000035
ORF1ab/nsp3820T820TacTacC12AY.1190.000035
ORF1ab/nsp3820T820IaCtaTt22AY.200.000078
ORF1ab/nsp3820T820TacTacA22AY.200.000078
ORF1ab/nsp3820T820NaCtaAt22AY.230.000139
ORF1ab/nsp3820T820IaCtaTt22AY.290.000032
ORF1ab/nsp3820T820IaCtaTt22AY.3.10.000171
ORF1ab/nsp3820T820AActGct22AY.40.000003
ORF1ab/nsp3820T820TacTacA12AY.4.2.10.000149
ORF1ab/nsp3820T820TacTacC12AY.4.2.10.000149
ORF1ab/nsp3820T820AActGct22AY.430.000009
ORF1ab/nsp3820T820NaCtaAt22AY.450.000243
ORF1ab/nsp3820T820IaCtaTt22AY.50.000041
ORF1ab/nsp3820T820IaCtaTt22AY.550.001835
ORF1ab/nsp3820T820NaCtaAt22AY.60.000082
ORF1ab/nsp3820T820SActTct22AY.680.000547
ORF1ab/nsp3820T820TacTacC22AY.900.001369
ORF1ab/nsp3820T820IaCtaTt22B.1.1.2220.000408
ORF1ab/nsp3820T820NaCtaAt22B.1.1.3160.00185
ORF1ab/nsp3820T820TacTacC22B.1.1.3170.000823
ORF1ab/nsp3820T820IaCtaTt22B.1.1.3690.000892
ORF1ab/nsp3820T820IaCtaTt22B.1.1.4160.00181
ORF1ab/nsp3820T820IaCtaTt22B.1.1.500.001358
ORF1ab/nsp3820T820IaCtaTt22B.1.1.5190.000079
ORF1ab/nsp3820T820PActCct22B.1.1.70.000002
ORF1ab/nsp3820T820VACtGTt22B.1.1.70.000002
ORF1ab/nsp3820T820IaCtaTt22B.1.1.830.00542
ORF1ab/nsp3820T820NaCtaAt22B.1.110.30.001437
ORF1ab/nsp3820T820AActGct22B.1.1600.000062
ORF1ab/nsp3820T820AActGct22B.1.1770.000026
ORF1ab/nsp3820T820delACT---22B.1.1770.000026
ORF1ab/nsp3820T820IaCtaTt22B.1.177.160.001329
ORF1ab/nsp3820T820IaCtaTt22B.1.177.330.003289
ORF1ab/nsp3820T820IaCtaTt22B.1.177.420.001789
ORF1ab/nsp3820T820IaCtaTt22B.1.177.670.015267
ORF1ab/nsp3820T820PActCct22B.1.20.000018
ORF1ab/nsp3820T820IaCtaTt22B.1.2200.021739
ORF1ab/nsp3820T820IaCtaTt22B.1.3110.000549
ORF1ab/nsp3820T820IaCtaTt22B.1.3140.015038
ORF1ab/nsp3820T820TacTacG12B.1.3510.00003
ORF1ab/nsp3820T820TacTacA12B.1.3510.00003
ORF1ab/nsp3820T820delACT---22B.1.360.000292
ORF1ab/nsp3820T820NaCtaAt22B.1.36.170.000988
ORF1ab/nsp3820T820IaCtaTt22B.1.390.007812
ORF1ab/nsp3820T820IaCtaTt22B.1.4090.001563
ORF1ab/nsp3820T820NaCtaAt22B.1.4290.000047
ORF1ab/nsp3820T820TacTacC22B.1.438.10.000215
ORF1ab/nsp3820T820NaCtaAt22B.1.5260.000047
ORF1ab/nsp3820T820IaCtaTt22B.1.5760.001813
ORF1ab/nsp3820T820IaCtaTt22B.1.5820.000981
ORF1ab/nsp3820T820IaCtaTt22B.1.5950.000522
ORF1ab/nsp3820T820AActGct22B.1.5960.000174
ORF1ab/nsp3820T820PActCct22B.1.617.20.000008
ORF1ab/nsp3820T820IaCtaTt22P.30.00319
ORF1ab/nsp3820T820IaCtaTt22V.10.045455
ORF1ab/nsp3820T820NaCtaAt22Y.10.025641
ORF1ab/nsp3820T820PActCct11A.20.000662
ORF1ab/nsp3820T820delACT---11A.2.20.001689
ORF1ab/nsp3820T820NaCtaAt11A.23.10.000704
ORF1ab/nsp3820T820IaCtaTt11A.250.018182
ORF1ab/nsp3820T820TacTacA11AE.50.018519
ORF1ab/nsp3820T820delACT---11AH.30.003802
ORF1ab/nsp3820T820del1ACt-Tt11All0
ORF1ab/nsp3820T820del2ACt--t11All0
ORF1ab/nsp3820T820CACtTGt11All0
ORF1ab/nsp3820T820NaCtaAt11AY.1020.000027
ORF1ab/nsp3820T820TacTacC11AY.1020.000027
ORF1ab/nsp3820T820PActCct11AY.1020.000027
ORF1ab/nsp3820T820NaCtaAt11AY.1030.000006
ORF1ab/nsp3820T820NaCtaAt11AY.1110.000183
ORF1ab/nsp3820T820NaCtaAt11AY.1140.000231
ORF1ab/nsp3820T820IaCtaTt11AY.1170.000085
ORF1ab/nsp3820T820NaCtaAt11AY.1180.000063
ORF1ab/nsp3820T820NaCtaAt11AY.1200.000037
ORF1ab/nsp3820T820delACT---11AY.1200.000037
ORF1ab/nsp3820T820NaCtaAt11AY.120.10.000321
ORF1ab/nsp3820T820TacTacC11AY.120.10.000321
ORF1ab/nsp3820T820IaCtaTt11AY.1210.000135
ORF1ab/nsp3820T820NaCtaAt11AY.160.00038
ORF1ab/nsp3820T820NaCtaAt11AY.250.000006
ORF1ab/nsp3820T820delACT---11AY.250.000006
ORF1ab/nsp3820T820IaCtaTt11AY.260.000028
ORF1ab/nsp3820T820IaCtaTt11AY.320.000532
ORF1ab/nsp3820T820PActCct11AY.330.000067
ORF1ab/nsp3820T820TacTacA11AY.340.000097
ORF1ab/nsp3820T820NaCtaAt11AY.39.10.00004
ORF1ab/nsp3820T820NaCtaAt11AY.4.20.000022
ORF1ab/nsp3820T820TacTacG11AY.4.20.000022
ORF1ab/nsp3820T820delACT---11AY.4.50.000107
ORF1ab/nsp3820T820IaCtaTt11AY.410.000294
ORF1ab/nsp3820T820IaCtaTt11AY.420.00004
ORF1ab/nsp3820T820TacTacC11AY.420.00004
ORF1ab/nsp3820T820NaCtaAt11AY.430.000004
ORF1ab/nsp3820T820IaCtaTt11AY.460.000104
ORF1ab/nsp3820T820IaCtaTt11AY.46.40.000165
ORF1ab/nsp3820T820TacTacA11AY.46.50.000198
ORF1ab/nsp3820T820IaCtaTt11AY.46.60.000072
ORF1ab/nsp3820T820AActGct11AY.470.000031
ORF1ab/nsp3820T820TacTacC11AY.530.000288
ORF1ab/nsp3820T820TacTacG11AY.540.000095
ORF1ab/nsp3820T820TacTacA11AY.570.000656
ORF1ab/nsp3820T820TacTacC11AY.60.000041
ORF1ab/nsp3820T820delACT---11AY.750.000056
ORF1ab/nsp3820T820IaCtaTt11AY.750.000056
ORF1ab/nsp3820T820TacTacC11AY.80.000606
ORF1ab/nsp3820T820NaCtaAt11AY.840.000437
ORF1ab/nsp3820T820TacTacC11AY.910.00073
ORF1ab/nsp3820T820IaCtaTt11AY.930.000273
ORF1ab/nsp3820T820IaCtaTt11AY.940.000443
ORF1ab/nsp3820T820IaCtaTt11AY.980.000079
ORF1ab/nsp3820T820IaCtaTt11AY.98.10.000048
ORF1ab/nsp3820T820NaCtaAt11AY.99.20.000092
ORF1ab/nsp3820T820IaCtaTt11AZ.20.000821
ORF1ab/nsp3820T820HACtCAt11B.10.000009
ORF1ab/nsp3820T820del2ACt--t11B.10.000009
ORF1ab/nsp3820T820LACtCTt11B.10.000009
ORF1ab/nsp3820T820PActCct11B.10.000009
ORF1ab/nsp3820T820LACtCTt11B.1.10.000018
ORF1ab/nsp3820T820PActCct11B.1.10.000018
ORF1ab/nsp3820T820HACtCAt11B.1.10.000018
ORF1ab/nsp3820T820IaCtaTt11B.1.1.100.001115
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1010.01
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1170.009709
ORF1ab/nsp3820T820delACT---11B.1.1.1420.017544
ORF1ab/nsp3820T820TacTacA11B.1.1.160.055556
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1700.001247
ORF1ab/nsp3820T820IaCtaTt11B.1.1.1740.003378
ORF1ab/nsp3820T820PActCct11B.1.1.1940.00495
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2000.007463
ORF1ab/nsp3820T820TacTacC11B.1.1.2040.00304
ORF1ab/nsp3820T820TacTacC11B.1.1.2140.000055
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2160.00089
ORF1ab/nsp3820T820TacTacA11B.1.1.2220.000204
ORF1ab/nsp3820T820CACtTGt11B.1.1.2320.001815
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2540.011236
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2770.000759
ORF1ab/nsp3820T820NaCtaAt11B.1.1.2800.003086
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2910.000742
ORF1ab/nsp3820T820IaCtaTt11B.1.1.2940.001266
ORF1ab/nsp3820T820IaCtaTt11B.1.1.3070.002532
ORF1ab/nsp3820T820delACT---11B.1.1.3150.008475
ORF1ab/nsp3820T820IaCtaTt11B.1.1.330.000421
ORF1ab/nsp3820T820TacTacC11B.1.1.3370.003597
ORF1ab/nsp3820T820TacTacC11B.1.1.3480.000796
ORF1ab/nsp3820T820IaCtaTt11B.1.1.3480.000796
ORF1ab/nsp3820T820delACT---11B.1.1.390.00051
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4090.002833
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4170.002703
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4320.001266
ORF1ab/nsp3820T820IaCtaTt11B.1.1.4360.025641
ORF1ab/nsp3820T820NaCtaAt11B.1.1.500.000679
ORF1ab/nsp3820T820NaCtaAt11B.1.1.5150.02
ORF1ab/nsp3820T820IaCtaTt11B.1.1.5180.006329
ORF1ab/nsp3820T820delACT---11B.1.1.5190.00004
ORF1ab/nsp3820T820delACT---11B.1.1.5210.005348
ORF1ab/nsp3820T820IaCtaTt11B.1.1.5250.005464
ORF1ab/nsp3820T820IaCtaTt11B.1.1.560.017857
ORF1ab/nsp3820T820SActTct11B.1.1.70.000001
ORF1ab/nsp3820T820del1ACt-Tt11B.1.1.70.000001
ORF1ab/nsp3820T820IaCtaTt11B.1.1110.001175
ORF1ab/nsp3820T820AActGct11B.1.1280.000635
ORF1ab/nsp3820T820delACT---11B.1.1400.018868
ORF1ab/nsp3820T820SActTct11B.1.1600.000031
ORF1ab/nsp3820T820TacTacC11B.1.1600.000031
ORF1ab/nsp3820T820AActGct11B.1.160.140.002119
ORF1ab/nsp3820T820TacTacC11B.1.160.290.004219
ORF1ab/nsp3820T820IaCtaTt11B.1.160.330.004425
ORF1ab/nsp3820T820TacTacA11B.1.160.70.002079
ORF1ab/nsp3820T820PActCct11B.1.1770.000013
ORF1ab/nsp3820T820NaCtaAt11B.1.177.160.000664
ORF1ab/nsp3820T820IaCtaTt11B.1.177.320.00135
ORF1ab/nsp3820T820NaCtaAt11B.1.177.40.000211
ORF1ab/nsp3820T820IaCtaTt11B.1.177.40.000211
ORF1ab/nsp3820T820IaCtaTt11B.1.177.50.001242
ORF1ab/nsp3820T820IaCtaTt11B.1.177.520.001757
ORF1ab/nsp3820T820NaCtaAt11B.1.177.520.001757
ORF1ab/nsp3820T820IaCtaTt11B.1.177.600.000218
ORF1ab/nsp3820T820delACT---11B.1.177.620.001192
ORF1ab/nsp3820T820delACT---11B.1.177.680.015152
ORF1ab/nsp3820T820IaCtaTt11B.1.177.70.000165
ORF1ab/nsp3820T820IaCtaTt11B.1.177.770.000726
ORF1ab/nsp3820T820IaCtaTt11B.1.177.810.000189
ORF1ab/nsp3820T820delACT---11B.1.177.810.000189
ORF1ab/nsp3820T820IaCtaTt11B.1.177.860.000183
ORF1ab/nsp3820T820TacTacA11B.1.177.860.000183
ORF1ab/nsp3820T820AActGct11B.1.20.000009
ORF1ab/nsp3820T820IaCtaTt11B.1.2100.002132
ORF1ab/nsp3820T820IaCtaTt11B.1.2190.009434
ORF1ab/nsp3820T820TacTacA11B.1.2320.000537
ORF1ab/nsp3820T820NaCtaAt11B.1.2340.000132
ORF1ab/nsp3820T820IaCtaTt11B.1.2340.000132
ORF1ab/nsp3820T820IaCtaTt11B.1.2370.004975
ORF1ab/nsp3820T820IaCtaTt11B.1.2420.018868
ORF1ab/nsp3820T820TacTacC11B.1.2430.00007
ORF1ab/nsp3820T820IaCtaTt11B.1.2650.001271
ORF1ab/nsp3820T820PActCct11B.1.30.002618
ORF1ab/nsp3820T820IaCtaTt11B.1.3150.006061
ORF1ab/nsp3820T820delACT---11B.1.3190.003049
ORF1ab/nsp3820T820IaCtaTt11B.1.351.20.000303
ORF1ab/nsp3820T820TacTacG11B.1.351.30.000876
ORF1ab/nsp3820T820NaCtaAt11B.1.3560.001727
ORF1ab/nsp3820T820NaCtaAt11B.1.3750.00082
ORF1ab/nsp3820T820NaCtaAt11B.1.3810.007812
ORF1ab/nsp3820T820IaCtaTt11B.1.3960.000706
ORF1ab/nsp3820T820NaCtaAt11B.1.3970.004854
ORF1ab/nsp3820T820NaCtaAt11B.1.4040.001302
ORF1ab/nsp3820T820IaCtaTt11B.1.4040.001302
ORF1ab/nsp3820T820delACT---11B.1.4150.014286
ORF1ab/nsp3820T820delACT---11B.1.416.10.001563
ORF1ab/nsp3820T820IaCtaTt11B.1.4200.010417
ORF1ab/nsp3820T820IaCtaTt11B.1.4220.000812
ORF1ab/nsp3820T820IaCtaTt11B.1.4250.002994
ORF1ab/nsp3820T820NaCtaAt11B.1.4270.00005
ORF1ab/nsp3820T820IaCtaTt11B.1.4340.052632
ORF1ab/nsp3820T820TacTacC11B.1.466.20.000391
ORF1ab/nsp3820T820TacTacC11B.1.5090.000866
ORF1ab/nsp3820T820AActGct11B.1.5260.000024
ORF1ab/nsp3820T820IaCtaTt11B.1.5650.00081
ORF1ab/nsp3820T820IaCtaTt11B.1.5680.001111
ORF1ab/nsp3820T820delACT---11B.1.5760.000907
ORF1ab/nsp3820T820IaCtaTt11B.1.5770.000687
ORF1ab/nsp3820T820TacTacC11B.1.5800.004065
ORF1ab/nsp3820T820NaCtaAt11B.1.5960.000087
ORF1ab/nsp3820T820TacTacC11B.1.5960.000087
ORF1ab/nsp3820T820IaCtaTt11B.1.6090.000479
ORF1ab/nsp3820T820delACT---11B.1.617.10.000129
ORF1ab/nsp3820T820IaCtaTt11B.1.6180.004032
ORF1ab/nsp3820T820delACT---11B.1.6210.000089
ORF1ab/nsp3820T820IaCtaTt11B.1.6230.000536
ORF1ab/nsp3820T820delACT---11B.1.6300.005236
ORF1ab/nsp3820T820IaCtaTt11B.1.6360.006711
ORF1ab/nsp3820T820NaCtaAt11B.1.6370.000073
ORF1ab/nsp3820T820delACT---11B.150.017544
ORF1ab/nsp3820T820AActGct11B.4.50.011905
ORF1ab/nsp3820T820VACtGTt11B.4.50.011905
ORF1ab/nsp3820T820NaCtaAt11B.4.50.011905
ORF1ab/nsp3820T820AActGct11C.300.001727
ORF1ab/nsp3820T820IaCtaTt11C.350.000774
ORF1ab/nsp3820T820delACT---11C.370.000116
ORF1ab/nsp3820T820IaCtaTt11D.20.000075
ORF1ab/nsp3820T820TacTacC11D.20.000075
ORF1ab/nsp3820T820NaCtaAt11P.10.000016
ORF1ab/nsp3820T820IaCtaTt11P.1.120.000484
ORF1ab/nsp3820T820AActGct11P.1.120.000484
ORF1ab/nsp3820T820IaCtaTt11P.1.90.004808
ORF1ab/nsp3820T820NaCtaAt11Q.40.000455
ORF1ab/nsp3820T820IaCtaTt11Q.70.001111
ORF1ab/nsp3820T820IaCtaTt11Q.80.000165
ORF1ab/nsp3820T820IaCtaTt11R.10.00009