CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 792

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3792H792YH1610YnonsynCatTat1333133315093-5095
ORF1ab/nsp3792H792HH1610HsyncaTcaC53153115093-5095
ORF1ab/nsp3792H792RH1610RnonsyncAtcGt48248215093-5095
ORF1ab/nsp3792H792LH1610LnonsyncAtcTt1961930.9846945093-5095
ORF1ab/nsp3792H792LH1610LnonsyncATcTC19620.01020415093-5095
ORF1ab/nsp3792H792LH1610LnonsyncATcTA19610.005102045093-5095
ORF1ab/nsp3792H792NH1610NnonsynCatAat13913915093-5095
ORF1ab/nsp3792H792QH1610QnonsyncaTcaA89860.9662925093-5095
ORF1ab/nsp3792H792QH1610QnonsyncaTcaG8930.03370795093-5095
ORF1ab/nsp3792H792delH1610deldelCAT---737315093-5095
ORF1ab/nsp3792H792PH1610PnonsyncAtcCt18160.8888895093-5095
ORF1ab/nsp3792H792PH1610PnonsyncATcCA1820.1111115093-5095
ORF1ab/nsp3792H792SH1610SnonsynCAtTCt320.6666675093-5095
ORF1ab/nsp3792H792SH1610SnonsynCAtAGt310.3333335093-5095
ORF1ab/nsp3792H792VH1610VnonsynCAtGTt210.55093-5095
ORF1ab/nsp3792H792VH1610VnonsynCATGTA210.55093-5095
ORF1ab/nsp3792H792AH1610AnonsynCAtGCt210.55093-5095
ORF1ab/nsp3792H792AH1610AnonsynCATGCA210.55093-5095
ORF1ab/nsp3792H792IH1610InonsynCAtATt210.55093-5095
ORF1ab/nsp3792H792IH1610InonsynCATATA210.55093-5095
ORF1ab/nsp3792H792TH1610TnonsynCAtACt210.55093-5095
ORF1ab/nsp3792H792TH1610TnonsynCATACA210.55093-5095
ORF1ab/nsp3792H792del1H1610del1delcaTca-210.55093-5095
ORF1ab/nsp3792H792del1H1610del1delCat-at210.55093-5095
ORF1ab/nsp3792H792DH1610DnonsynCatGat1115093-5095
ORF1ab/nsp3792H792EH1610EnonsynCaTGaA1115093-5095
ORF1ab/nsp3792H792KH1610KnonsynCaTAaA1115093-5095
ORF1ab/nsp3792H792del2H1610del2delCAt--t1115093-5095

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3792H792YCatTat13331333All0.000255
ORF1ab/nsp3792H792HcaTcaC531531All0.000102
ORF1ab/nsp3792H792RcAtcGt482482All0.000092
ORF1ab/nsp3792H792YCatTat315315AY.1210.042625
ORF1ab/nsp3792H792LcAtcTt193196All0.000037
ORF1ab/nsp3792H792LcATcTC2196All0
ORF1ab/nsp3792H792LcATcTA1196All0
ORF1ab/nsp3792H792RcAtcGt196196B.1.1.70.000175
ORF1ab/nsp3792H792YCatTat193193AY.290.003044
ORF1ab/nsp3792H792YCatTat163163B.1.617.20.000614
ORF1ab/nsp3792H792NCatAat139139All0.000027
ORF1ab/nsp3792H792HcaTcaC133133B.1.1.70.000119
ORF1ab/nsp3792H792HcaTcaC114114AY.440.000694
ORF1ab/nsp3792H792YCatTat100100B.1.1.70.00009
ORF1ab/nsp3792H792QcaTcaA8689All0.000016
ORF1ab/nsp3792H792QcaTcaG389All0.000001
ORF1ab/nsp3792H792YCatTat8484B.1.438.10.00901
ORF1ab/nsp3792H792LcAtcTt7777AY.690.014374
ORF1ab/nsp3792H792delCAT---7373All0.000014
ORF1ab/nsp3792H792HcaTcaC7171B.1.6290.946667
ORF1ab/nsp3792H792YCatTat4444AY.250.000265
ORF1ab/nsp3792H792RcAtcGt4242AY.750.002353
ORF1ab/nsp3792H792LcAtcTt3941B.1.1.70.000035
ORF1ab/nsp3792H792LcATcTC241B.1.1.70.000002
ORF1ab/nsp3792H792LcAtcTt3838AY.40.000059
ORF1ab/nsp3792H792RcAtcGt3737B.1.617.20.000139
ORF1ab/nsp3792H792QcaTcaA3131AY.40.000048
ORF1ab/nsp3792H792YCatTat3131B.1.20.000273
ORF1ab/nsp3792H792YCatTat2727B.10.000247
ORF1ab/nsp3792H792YCatTat2727P.10.000425
ORF1ab/nsp3792H792RcAtcGt2525AY.290.000394
ORF1ab/nsp3792H792HcaTcaC2525B.1.1600.00078
ORF1ab/nsp3792H792RcAtcGt2525B.1.2340.003299
ORF1ab/nsp3792H792RcAtcGt2424AY.1030.000149
ORF1ab/nsp3792H792YCatTat2424AY.40.000037
ORF1ab/nsp3792H792YCatTat2222B.1.1600.000686
ORF1ab/nsp3792H792QcaTcaA2121AY.4.50.002257
ORF1ab/nsp3792H792YCatTat2020AY.440.000122
ORF1ab/nsp3792H792PcAtcCt1618All0.000003
ORF1ab/nsp3792H792PcATcCA218All0
ORF1ab/nsp3792H792YCatTat1818B.1.1.2840.001933
ORF1ab/nsp3792H792RcAtcGt1717AY.30.000169
ORF1ab/nsp3792H792HcaTcaC1717AY.40.000026
ORF1ab/nsp3792H792YCatTat1717AY.430.000075
ORF1ab/nsp3792H792delCAT---1717B.1.1.70.000015
ORF1ab/nsp3792H792YCatTat1717B.1.4290.0004
ORF1ab/nsp3792H792NCatAat1616B.1.1600.000499
ORF1ab/nsp3792H792YCatTat1616B.1.160.140.033898
ORF1ab/nsp3792H792RcAtcGt1515AY.40.000023
ORF1ab/nsp3792H792YCatTat1515AY.99.20.001382
ORF1ab/nsp3792H792RcAtcGt1414AY.1000.000644
ORF1ab/nsp3792H792YCatTat1414AY.1030.000087
ORF1ab/nsp3792H792RcAtcGt1414B.1.20.000123
ORF1ab/nsp3792H792HcaTcaC1313AY.540.00124
ORF1ab/nsp3792H792delCAT---1313B.10.000119
ORF1ab/nsp3792H792HcaTcaC1313B.1.617.20.000049
ORF1ab/nsp3792H792NCatAat1111B.1.1770.000145
ORF1ab/nsp3792H792HcaTcaC1010AY.250.00006
ORF1ab/nsp3792H792HcaTcaC1010AY.430.000044
ORF1ab/nsp3792H792YCatTat1010P.1.150.002323
ORF1ab/nsp3792H792HcaTcaC99AY.3.10.000767
ORF1ab/nsp3792H792HcaTcaC99AY.390.000222
ORF1ab/nsp3792H792HcaTcaC99B.10.000082
ORF1ab/nsp3792H792HcaTcaC99B.1.258.110.003567
ORF1ab/nsp3792H792YCatTat99B.1.5260.000212
ORF1ab/nsp3792H792YCatTat88B.1.2210.000568
ORF1ab/nsp3792H792RcAtcGt88B.1.3510.000238
ORF1ab/nsp3792H792YCatTat77AY.1190.000247
ORF1ab/nsp3792H792NCatAat77B.10.000064
ORF1ab/nsp3792H792NCatAat77B.1.10.000127
ORF1ab/nsp3792H792YCatTat66AY.1200.000223
ORF1ab/nsp3792H792RcAtcGt66AY.200.000233
ORF1ab/nsp3792H792RcAtcGt66AY.430.000027
ORF1ab/nsp3792H792LcAtcTt66AY.440.000037
ORF1ab/nsp3792H792YCatTat66B.1.2340.000792
ORF1ab/nsp3792H792RcAtcGt66B.1.2410.00487
ORF1ab/nsp3792H792HcaTcaC66P.10.000095
ORF1ab/nsp3792H792YCatTat55AY.1020.000133
ORF1ab/nsp3792H792HcaTcaC55AY.1030.000031
ORF1ab/nsp3792H792RcAtcGt55AY.250.00003
ORF1ab/nsp3792H792QcaTcaA55AY.390.000124
ORF1ab/nsp3792H792QcaTcaA55AY.90.000338
ORF1ab/nsp3792H792RcAtcGt55B.10.000046
ORF1ab/nsp3792H792YCatTat55B.1.10.000091
ORF1ab/nsp3792H792HcaTcaC55B.1.1.2220.00102
ORF1ab/nsp3792H792NCatAat55B.1.160.200.044643
ORF1ab/nsp3792H792NCatAat55B.1.177.440.002595
ORF1ab/nsp3792H792LcAtcTt55B.1.2210.000355
ORF1ab/nsp3792H792YCatTat55B.1.3110.001373
ORF1ab/nsp3792H792NCatAat55B.1.36.10.005701
ORF1ab/nsp3792H792HcaTcaC55B.1.4700.007022
ORF1ab/nsp3792H792QcaTcaA55B.1.617.20.000019
ORF1ab/nsp3792H792delCAT---440.222222
ORF1ab/nsp3792H792PcAtcCt240.111111
ORF1ab/nsp3792H792PcATcCA240.111111
ORF1ab/nsp3792H792LcAtcTt44AY.250.000024
ORF1ab/nsp3792H792delCAT---44AY.430.000018
ORF1ab/nsp3792H792YCatTat44AY.470.000124
ORF1ab/nsp3792H792QcaTcaA44AY.80.002424
ORF1ab/nsp3792H792YCatTat44AY.980.000316
ORF1ab/nsp3792H792NCatAat44B.1.1.390.002039
ORF1ab/nsp3792H792NCatAat44B.1.160.150.019802
ORF1ab/nsp3792H792NCatAat44B.1.160.160.003717
ORF1ab/nsp3792H792YCatTat44B.1.1770.000053
ORF1ab/nsp3792H792NCatAat44B.1.2580.000266
ORF1ab/nsp3792H792NCatAat44B.1.258.170.000416
ORF1ab/nsp3792H792LcAtcTt44B.1.3510.000119
ORF1ab/nsp3792H792HcaTcaC44B.1.36.290.002069
ORF1ab/nsp3792H792NCatAat44B.1.36.350.010417
ORF1ab/nsp3792H792RcAtcGt44B.1.5260.000094
ORF1ab/nsp3792H792delCAT---44B.1.617.10.000516
ORF1ab/nsp3792H792YCatTat44P.1.140.000191
ORF1ab/nsp3792H792YCatTat44Q.10.000505
ORF1ab/nsp3792H792HcaTcaC44Q.70.004444
ORF1ab/nsp3792H792SCAtTCt23All0
ORF1ab/nsp3792H792SCAtAGt13All0
ORF1ab/nsp3792H792YCatTat33AY.1110.000549
ORF1ab/nsp3792H792RcAtcGt33AY.230.000209
ORF1ab/nsp3792H792RcAtcGt33AY.440.000018
ORF1ab/nsp3792H792YCatTat33AY.46.20.001906
ORF1ab/nsp3792H792HcaTcaC33AY.50.000062
ORF1ab/nsp3792H792RcAtcGt33AY.50.000062
ORF1ab/nsp3792H792YCatTat33AY.540.000286
ORF1ab/nsp3792H792HcaTcaC33AY.610.000314
ORF1ab/nsp3792H792YCatTat33AY.9.10.000251
ORF1ab/nsp3792H792QcaTcaA33B.1.1.70.000003
ORF1ab/nsp3792H792NCatAat33B.1.1.700.001023
ORF1ab/nsp3792H792NCatAat33B.1.160.140.006356
ORF1ab/nsp3792H792YCatTat33B.1.160.270.045455
ORF1ab/nsp3792H792NCatAat33B.1.160.90.021583
ORF1ab/nsp3792H792LcAtcTt33B.1.1770.00004
ORF1ab/nsp3792H792HcaTcaC33C.370.000348
ORF1ab/nsp3792H792YCatTat33D.20.000225
ORF1ab/nsp3792H792QcaTcaA220.111111
ORF1ab/nsp3792H792ICAtATt120.055556
ORF1ab/nsp3792H792ACAtGCt120.055556
ORF1ab/nsp3792H792TCAtACt120.055556
ORF1ab/nsp3792H792VCATGTA120.055556
ORF1ab/nsp3792H792ICATATA120.055556
ORF1ab/nsp3792H792TCATACA120.055556
ORF1ab/nsp3792H792ACATGCA120.055556
ORF1ab/nsp3792H792VCAtGTt120.055556
ORF1ab/nsp3792H792LcATcTA120.055556
ORF1ab/nsp3792H792LcAtcTt120.055556
ORF1ab/nsp3792H792ICATATA12All0
ORF1ab/nsp3792H792ICAtATt12All0
ORF1ab/nsp3792H792VCATGTA12All0
ORF1ab/nsp3792H792del1caTca-12All0
ORF1ab/nsp3792H792ACATGCA12All0
ORF1ab/nsp3792H792TCAtACt12All0
ORF1ab/nsp3792H792TCATACA12All0
ORF1ab/nsp3792H792ACAtGCt12All0
ORF1ab/nsp3792H792del1Cat-at12All0
ORF1ab/nsp3792H792VCAtGTt12All0
ORF1ab/nsp3792H792PcAtcCt22AY.1020.000053
ORF1ab/nsp3792H792RcAtcGt22AY.1020.000053
ORF1ab/nsp3792H792YCatTat22AY.1130.000285
ORF1ab/nsp3792H792HcaTcaC22AY.1170.000169
ORF1ab/nsp3792H792QcaTcaA22AY.1200.000074
ORF1ab/nsp3792H792NCatAat22AY.200.000078
ORF1ab/nsp3792H792YCatTat22AY.200.000078
ORF1ab/nsp3792H792delCAT---22AY.250.000012
ORF1ab/nsp3792H792YCatTat22AY.30.00002
ORF1ab/nsp3792H792YCatTat22AY.380.000999
ORF1ab/nsp3792H792YCatTat22AY.390.000049
ORF1ab/nsp3792H792RcAtcGt22AY.4.20.000043
ORF1ab/nsp3792H792YCatTat22AY.4.50.000215
ORF1ab/nsp3792H792YCatTat22AY.420.00008
ORF1ab/nsp3792H792NCatAat22AY.430.000009
ORF1ab/nsp3792H792YCatTat22AY.50.000041
ORF1ab/nsp3792H792HcaTcaC22AY.5.30.000675
ORF1ab/nsp3792H792QcaTcaA22AY.580.001815
ORF1ab/nsp3792H792RcAtcGt22AY.80.001212
ORF1ab/nsp3792H792YCatTat22AY.820.002714
ORF1ab/nsp3792H792HcaTcaC22AY.90.000135
ORF1ab/nsp3792H792HcaTcaC22AY.9.10.000167
ORF1ab/nsp3792H792HcaTcaC22AY.910.001461
ORF1ab/nsp3792H792HcaTcaC22AY.98.10.000097
ORF1ab/nsp3792H792YCatTat22AY.98.10.000097
ORF1ab/nsp3792H792PcAtcCt22B.10.000018
ORF1ab/nsp3792H792PcAtcCt22B.1.10.000036
ORF1ab/nsp3792H792LcAtcTt22B.1.10.000036
ORF1ab/nsp3792H792HcaTcaC22B.1.10.000036
ORF1ab/nsp3792H792YCatTat22B.1.1.4060.012987
ORF1ab/nsp3792H792YCatTat22B.1.1.4180.045455
ORF1ab/nsp3792H792NCatAat22B.1.1.4450.074074
ORF1ab/nsp3792H792NCatAat22B.1.1.70.000002
ORF1ab/nsp3792H792NCatAat22B.1.160.290.008439
ORF1ab/nsp3792H792NCatAat22B.1.160.300.005952
ORF1ab/nsp3792H792NCatAat22B.1.160.320.008584
ORF1ab/nsp3792H792NCatAat22B.1.177.430.002954
ORF1ab/nsp3792H792LcAtcTt22B.1.20.000018
ORF1ab/nsp3792H792NCatAat22B.1.2360.004107
ORF1ab/nsp3792H792HcaTcaC22B.1.2580.000133
ORF1ab/nsp3792H792delCAT---22B.1.360.000292
ORF1ab/nsp3792H792HcaTcaC22B.1.3690.00057
ORF1ab/nsp3792H792YCatTat22B.1.4270.000101
ORF1ab/nsp3792H792YCatTat22B.1.466.20.000782
ORF1ab/nsp3792H792HcaTcaC22B.1.5250.000226
ORF1ab/nsp3792H792PcAtcCt22B.1.5260.000047
ORF1ab/nsp3792H792YCatTat22B.1.5950.000522
ORF1ab/nsp3792H792LcAtcTt22B.1.617.20.000008
ORF1ab/nsp3792H792YCatTat22B.1.6370.000146
ORF1ab/nsp3792H792ECaTGaA110.055556
ORF1ab/nsp3792H792KCaTAaA110.055556
ORF1ab/nsp3792H792DCatGat110.055556
ORF1ab/nsp3792H792NCatAat110.055556
ORF1ab/nsp3792H792RcAtcGt11A0.000387
ORF1ab/nsp3792H792YCatTat11A0.000387
ORF1ab/nsp3792H792NCatAat11A0.000387
ORF1ab/nsp3792H792delCAT---11A.2.20.001689
ORF1ab/nsp3792H792NCatAat11AF.10.037037
ORF1ab/nsp3792H792delCAT---11AH.30.003802
ORF1ab/nsp3792H792ECaTGaA11All0
ORF1ab/nsp3792H792DCatGat11All0
ORF1ab/nsp3792H792del2CAt--t11All0
ORF1ab/nsp3792H792KCaTAaA11All0
ORF1ab/nsp3792H792LcAtcTt11AY.1000.000046
ORF1ab/nsp3792H792LcAtcTt11AY.1020.000027
ORF1ab/nsp3792H792LcAtcTt11AY.1030.000006
ORF1ab/nsp3792H792LcAtcTt11AY.1050.000643
ORF1ab/nsp3792H792YCatTat11AY.1170.000085
ORF1ab/nsp3792H792PcAtcCt11AY.1170.000085
ORF1ab/nsp3792H792YCatTat11AY.1180.000063
ORF1ab/nsp3792H792RcAtcGt11AY.1190.000035
ORF1ab/nsp3792H792HcaTcaC11AY.120.000316
ORF1ab/nsp3792H792HcaTcaC11AY.120.10.000321
ORF1ab/nsp3792H792RcAtcGt11AY.1210.000135
ORF1ab/nsp3792H792QcaTcaG11AY.140.000088
ORF1ab/nsp3792H792QcaTcaA11AY.170.008197
ORF1ab/nsp3792H792HcaTcaC11AY.230.00007
ORF1ab/nsp3792H792YCatTat11AY.260.000028
ORF1ab/nsp3792H792LcAtcTt11AY.270.000065
ORF1ab/nsp3792H792HcaTcaC11AY.290.000016
ORF1ab/nsp3792H792YCatTat11AY.34.10.00051
ORF1ab/nsp3792H792HcaTcaC11AY.350.000233
ORF1ab/nsp3792H792YCatTat11AY.360.000148
ORF1ab/nsp3792H792YCatTat11AY.370.000316
ORF1ab/nsp3792H792delCAT---11AY.40.000002
ORF1ab/nsp3792H792YCatTat11AY.4.10.000737
ORF1ab/nsp3792H792YCatTat11AY.4.20.000022
ORF1ab/nsp3792H792HcaTcaC11AY.4.20.000022
ORF1ab/nsp3792H792delCAT---11AY.4.50.000107
ORF1ab/nsp3792H792HcaTcaC11AY.420.00004
ORF1ab/nsp3792H792RcAtcGt11AY.420.00004
ORF1ab/nsp3792H792LcAtcTt11AY.430.000004
ORF1ab/nsp3792H792NCatAat11AY.440.000006
ORF1ab/nsp3792H792QcaTcaG11AY.440.000006
ORF1ab/nsp3792H792RcAtcGt11AY.460.000104
ORF1ab/nsp3792H792YCatTat11AY.46.40.000165
ORF1ab/nsp3792H792LcAtcTt11AY.46.60.000072
ORF1ab/nsp3792H792HcaTcaC11AY.46.60.000072
ORF1ab/nsp3792H792YCatTat11AY.530.000288
ORF1ab/nsp3792H792YCatTat11AY.550.000917
ORF1ab/nsp3792H792LcAtcTt11AY.560.001605
ORF1ab/nsp3792H792YCatTat11AY.60.000041
ORF1ab/nsp3792H792RcAtcGt11AY.60.000041
ORF1ab/nsp3792H792RcAtcGt11AY.610.000105
ORF1ab/nsp3792H792YCatTat11AY.610.000105
ORF1ab/nsp3792H792YCatTat11AY.650.000533
ORF1ab/nsp3792H792HcaTcaC11AY.680.000274
ORF1ab/nsp3792H792delCAT---11AY.7.20.000559
ORF1ab/nsp3792H792YCatTat11AY.750.000056
ORF1ab/nsp3792H792HcaTcaC11AY.750.000056
ORF1ab/nsp3792H792delCAT---11AY.750.000056
ORF1ab/nsp3792H792YCatTat11AY.80.000606
ORF1ab/nsp3792H792YCatTat11AY.830.001724
ORF1ab/nsp3792H792HcaTcaC11AY.840.000437
ORF1ab/nsp3792H792QcaTcaA11AY.870.000833
ORF1ab/nsp3792H792YCatTat11AY.90.000068
ORF1ab/nsp3792H792NCatAat11AY.9.20.000037
ORF1ab/nsp3792H792YCatTat11AY.920.000287
ORF1ab/nsp3792H792HcaTcaC11AY.930.000273
ORF1ab/nsp3792H792YCatTat11AY.930.000273
ORF1ab/nsp3792H792PcAtcCt11AY.960.002075
ORF1ab/nsp3792H792NCatAat11AY.980.000079
ORF1ab/nsp3792H792RcAtcGt11AY.980.000079
ORF1ab/nsp3792H792NCatAat11B0.000128
ORF1ab/nsp3792H792LcAtcTt11B0.000128
ORF1ab/nsp3792H792LcAtcTt11B.10.000009
ORF1ab/nsp3792H792QcaTcaA11B.10.000009
ORF1ab/nsp3792H792SCAtTCt11B.10.000009
ORF1ab/nsp3792H792SCAtTCt11B.1.10.000018
ORF1ab/nsp3792H792delCAT---11B.1.10.000018
ORF1ab/nsp3792H792RcAtcGt11B.1.10.000018
ORF1ab/nsp3792H792delCAT---11B.1.1.1420.017544
ORF1ab/nsp3792H792NCatAat11B.1.1.1890.001513
ORF1ab/nsp3792H792QcaTcaG11B.1.1.2140.000055
ORF1ab/nsp3792H792YCatTat11B.1.1.2190.005
ORF1ab/nsp3792H792YCatTat11B.1.1.2220.000204
ORF1ab/nsp3792H792YCatTat11B.1.1.2990.012195
ORF1ab/nsp3792H792HcaTcaC11B.1.1.3060.000438
ORF1ab/nsp3792H792delCAT---11B.1.1.3150.008475
ORF1ab/nsp3792H792delCAT---11B.1.1.390.00051
ORF1ab/nsp3792H792RcAtcGt11B.1.1.4090.002833
ORF1ab/nsp3792H792YCatTat11B.1.1.4320.001266
ORF1ab/nsp3792H792YCatTat11B.1.1.4330.001425
ORF1ab/nsp3792H792NCatAat11B.1.1.470.005348
ORF1ab/nsp3792H792HcaTcaC11B.1.1.5060.037037
ORF1ab/nsp3792H792YCatTat11B.1.1.5190.00004
ORF1ab/nsp3792H792delCAT---11B.1.1.5190.00004
ORF1ab/nsp3792H792HcaTcaC11B.1.1.5230.001563
ORF1ab/nsp3792H792NCatAat11B.1.1.580.005376
ORF1ab/nsp3792H792YCatTat11B.1.1.630.000386
ORF1ab/nsp3792H792SCAtAGt11B.1.1.70.000001
ORF1ab/nsp3792H792del2CAt--t11B.1.1.70.000001
ORF1ab/nsp3792H792YCatTat11B.1.1.750.010638
ORF1ab/nsp3792H792NCatAat11B.1.1110.001175
ORF1ab/nsp3792H792delCAT---11B.1.1400.018868
ORF1ab/nsp3792H792NCatAat11B.1.1460.004237
ORF1ab/nsp3792H792NCatAat11B.1.1580.02381
ORF1ab/nsp3792H792PcAtcCt11B.1.1600.000031
ORF1ab/nsp3792H792NCatAat11B.1.160.100.008065
ORF1ab/nsp3792H792NCatAat11B.1.160.110.005714
ORF1ab/nsp3792H792NCatAat11B.1.160.120.00641
ORF1ab/nsp3792H792NCatAat11B.1.160.220.006757
ORF1ab/nsp3792H792NCatAat11B.1.160.260.002421
ORF1ab/nsp3792H792NCatAat11B.1.160.280.002924
ORF1ab/nsp3792H792PcAtcCt11B.1.1770.000013
ORF1ab/nsp3792H792delCAT---11B.1.1770.000013
ORF1ab/nsp3792H792delCAT---11B.1.177.150.000631
ORF1ab/nsp3792H792YCatTat11B.1.177.210.000076
ORF1ab/nsp3792H792RcAtcGt11B.1.177.210.000076
ORF1ab/nsp3792H792NCatAat11B.1.177.230.003236
ORF1ab/nsp3792H792NCatAat11B.1.177.310.011494
ORF1ab/nsp3792H792YCatTat11B.1.177.320.00135
ORF1ab/nsp3792H792YCatTat11B.1.177.440.000519
ORF1ab/nsp3792H792YCatTat11B.1.177.60.000977
ORF1ab/nsp3792H792delCAT---11B.1.177.620.001192
ORF1ab/nsp3792H792delCAT---11B.1.177.680.015152
ORF1ab/nsp3792H792NCatAat11B.1.177.710.010101
ORF1ab/nsp3792H792NCatAat11B.1.177.810.000189
ORF1ab/nsp3792H792NCatAat11B.1.177.860.000183
ORF1ab/nsp3792H792NCatAat11B.1.177.890.02439
ORF1ab/nsp3792H792HcaTcaC11B.1.20.000009
ORF1ab/nsp3792H792del1caTca-11B.1.20.000009
ORF1ab/nsp3792H792NCatAat11B.1.20.000009
ORF1ab/nsp3792H792YCatTat11B.1.2200.01087
ORF1ab/nsp3792H792QcaTcaA11B.1.2210.000071
ORF1ab/nsp3792H792NCatAat11B.1.2210.000071
ORF1ab/nsp3792H792RcAtcGt11B.1.2250.015385
ORF1ab/nsp3792H792HcaTcaC11B.1.2340.000132
ORF1ab/nsp3792H792RcAtcGt11B.1.2400.000216
ORF1ab/nsp3792H792HcaTcaC11B.1.2400.000216
ORF1ab/nsp3792H792YCatTat11B.1.2430.00007
ORF1ab/nsp3792H792YCatTat11B.1.258.170.000104
ORF1ab/nsp3792H792YCatTat11B.1.2650.001271
ORF1ab/nsp3792H792YCatTat11B.1.2790.000514
ORF1ab/nsp3792H792RcAtcGt11B.1.3110.000275
ORF1ab/nsp3792H792YCatTat11B.1.3130.006579
ORF1ab/nsp3792H792delCAT---11B.1.3190.003049
ORF1ab/nsp3792H792YCatTat11B.1.3240.001605
ORF1ab/nsp3792H792HcaTcaC11B.1.3510.00003
ORF1ab/nsp3792H792YCatTat11B.1.3510.00003
ORF1ab/nsp3792H792PcAtcCt11B.1.3510.00003
ORF1ab/nsp3792H792HcaTcaC11B.1.351.20.000303
ORF1ab/nsp3792H792YCatTat11B.1.351.30.000876
ORF1ab/nsp3792H792YCatTat11B.1.360.000146
ORF1ab/nsp3792H792HcaTcaC11B.1.360.000146
ORF1ab/nsp3792H792PcAtcCt11B.1.36.170.000494
ORF1ab/nsp3792H792HcaTcaC11B.1.36.310.001751
ORF1ab/nsp3792H792HcaTcaC11B.1.36.360.000602
ORF1ab/nsp3792H792HcaTcaC11B.1.36.390.002217
ORF1ab/nsp3792H792delCAT---11B.1.3750.00082
ORF1ab/nsp3792H792delCAT---11B.1.4150.014286
ORF1ab/nsp3792H792YCatTat11B.1.4160.001269
ORF1ab/nsp3792H792delCAT---11B.1.416.10.001563
ORF1ab/nsp3792H792HcaTcaC11B.1.4290.000024
ORF1ab/nsp3792H792YCatTat11B.1.4360.001029
ORF1ab/nsp3792H792NCatAat11B.1.4690.00361
ORF1ab/nsp3792H792RcAtcGt11B.1.4740.001901
ORF1ab/nsp3792H792delCAT---11B.1.5600.00463
ORF1ab/nsp3792H792HcaTcaC11B.1.5750.000303
ORF1ab/nsp3792H792YCatTat11B.1.5750.000303
ORF1ab/nsp3792H792YCatTat11B.1.5760.000907
ORF1ab/nsp3792H792delCAT---11B.1.5760.000907
ORF1ab/nsp3792H792QcaTcaA11B.1.5990.00365
ORF1ab/nsp3792H792HcaTcaC11B.1.617.10.000129
ORF1ab/nsp3792H792del1Cat-at11B.1.617.10.000129
ORF1ab/nsp3792H792delCAT---11B.1.617.20.000004
ORF1ab/nsp3792H792HcaTcaC11B.1.6190.000871
ORF1ab/nsp3792H792NCatAat11B.1.6200.000946
ORF1ab/nsp3792H792delCAT---11B.1.6210.000089
ORF1ab/nsp3792H792NCatAat11B.1.6230.000536
ORF1ab/nsp3792H792YCatTat11B.1.6230.000536
ORF1ab/nsp3792H792YCatTat11B.1.6280.000352
ORF1ab/nsp3792H792YCatTat11B.1.840.020833
ORF1ab/nsp3792H792YCatTat11B.120.00641
ORF1ab/nsp3792H792delCAT---11B.150.017544
ORF1ab/nsp3792H792RcAtcGt11B.30.000831
ORF1ab/nsp3792H792delCAT---11B.340.013699
ORF1ab/nsp3792H792NCatAat11C.160.00106
ORF1ab/nsp3792H792YCatTat11C.360.000911
ORF1ab/nsp3792H792NCatAat11C.36.20.034483
ORF1ab/nsp3792H792delCAT---11C.370.000116
ORF1ab/nsp3792H792RcAtcGt11P.10.000016
ORF1ab/nsp3792H792YCatTat11P.1.120.000484
ORF1ab/nsp3792H792QcaTcaA11P.1.120.000484
ORF1ab/nsp3792H792RcAtcGt11P.1.20.001156
ORF1ab/nsp3792H792HcaTcaC11P.1.70.000319
ORF1ab/nsp3792H792YCatTat11P.20.000187
ORF1ab/nsp3792H792HcaTcaC11Q.80.000165
ORF1ab/nsp3792H792YCatTat11Q.80.000165
ORF1ab/nsp3792H792HcaTcaC11R.10.00009