CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 766

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3766V766MV1584MnonsynGtgAtg2184218415015-5017
ORF1ab/nsp3766V766VV1584VsyngtGgtA157313060.8302615015-5017
ORF1ab/nsp3766V766VV1584VsyngtGgtT15732640.1678325015-5017
ORF1ab/nsp3766V766VV1584VsyngtGgtC157330.001907185015-5017
ORF1ab/nsp3766V766LV1584LnonsynGtgTtg1221170.9590165015-5017
ORF1ab/nsp3766V766LV1584LnonsynGtgCtg12240.03278695015-5017
ORF1ab/nsp3766V766LV1584LnonsynGtGTtA12210.008196725015-5017
ORF1ab/nsp3766V766AV1584AnonsyngTggCg969615015-5017
ORF1ab/nsp3766V766delV1584deldelGTG---777715015-5017
ORF1ab/nsp3766V766del1V1584del1delgtGgt-17160.9411765015-5017
ORF1ab/nsp3766V766del1V1584del1delGTG-NN1710.05882355015-5017
ORF1ab/nsp3766V766GV1584GnonsyngTggGg6615015-5017
ORF1ab/nsp3766V766del2V1584del2delgTGg--320.6666675015-5017
ORF1ab/nsp3766V766del2V1584del2delGTG--N310.3333335015-5017
ORF1ab/nsp3766V766EV1584EnonsyngTggAg2215015-5017
ORF1ab/nsp3766V766IV1584InonsynGtGAtT1115015-5017

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3766V766MGtgAtg21842184All0.000418
ORF1ab/nsp3766V766VgtGgtA13061573All0.00025
ORF1ab/nsp3766V766VgtGgtT2641573All0.00005
ORF1ab/nsp3766V766VgtGgtC31573All0.000001
ORF1ab/nsp3766V766MGtgAtg12681268B.1.4090.990625
ORF1ab/nsp3766V766VgtGgtA863864AY.800.974041
ORF1ab/nsp3766V766VgtGgtT1864AY.800.001129
ORF1ab/nsp3766V766MGtgAtg407407AY.60.016739
ORF1ab/nsp3766V766LGtgTtg117122All0.000022
ORF1ab/nsp3766V766LGtgCtg4122All0.000001
ORF1ab/nsp3766V766LGtGTtA1122All0
ORF1ab/nsp3766V766VgtGgtA116119AY.440.000706
ORF1ab/nsp3766V766VgtGgtT2119AY.440.000012
ORF1ab/nsp3766V766VgtGgtC1119AY.440.000006
ORF1ab/nsp3766V766VgtGgtA69103B.1.1.70.000062
ORF1ab/nsp3766V766VgtGgtT34103B.1.1.70.00003
ORF1ab/nsp3766V766AgTggCg9696All0.000018
ORF1ab/nsp3766V766MGtgAtg9494AY.30.000935
ORF1ab/nsp3766V766MGtgAtg8484B.1.1.70.000075
ORF1ab/nsp3766V766VgtGgtT8083P.10.00126
ORF1ab/nsp3766V766VgtGgtA383P.10.000047
ORF1ab/nsp3766V766delGTG---7777All0.000015
ORF1ab/nsp3766V766MGtgAtg6969AY.40.000107
ORF1ab/nsp3766V766VgtGgtA4162AY.40.000064
ORF1ab/nsp3766V766VgtGgtT2162AY.40.000033
ORF1ab/nsp3766V766VgtGgtA4949AY.1020.001299
ORF1ab/nsp3766V766LGtgTtg4243B.1.20.00037
ORF1ab/nsp3766V766LGtgCtg143B.1.20.000009
ORF1ab/nsp3766V766MGtgAtg3838B.1.20.000335
ORF1ab/nsp3766V766MGtgAtg3232B.10.000293
ORF1ab/nsp3766V766VgtGgtA2929B.1.5250.003282
ORF1ab/nsp3766V766VgtGgtT2828A.10.007892
ORF1ab/nsp3766V766AgTggCg2727AY.40.000042
ORF1ab/nsp3766V766MGtgAtg2727B.1.617.20.000102
ORF1ab/nsp3766V766delGTG---2222B.1.1.70.00002
ORF1ab/nsp3766V766VgtGgtA2222B.1.5260.000517
ORF1ab/nsp3766V766LGtgTtg1818AY.1200.000669
ORF1ab/nsp3766V766del1gtGgt-1617All0.000003
ORF1ab/nsp3766V766del1GTG-NN117All0
ORF1ab/nsp3766V766VgtGgtT1617AY.1030.000099
ORF1ab/nsp3766V766VgtGgtA117AY.1030.000006
ORF1ab/nsp3766V766AgTggCg1515B.1.1.70.000013
ORF1ab/nsp3766V766VgtGgtA815B.1.617.20.00003
ORF1ab/nsp3766V766VgtGgtT715B.1.617.20.000026
ORF1ab/nsp3766V766LGtgTtg1414AY.1030.000087
ORF1ab/nsp3766V766VgtGgtA1114B.1.20.000097
ORF1ab/nsp3766V766VgtGgtT314B.1.20.000026
ORF1ab/nsp3766V766delGTG---1313B.10.000119
ORF1ab/nsp3766V766MGtgAtg1313B.1.1.1810.059091
ORF1ab/nsp3766V766MGtgAtg1313B.1.2580.000865
ORF1ab/nsp3766V766MGtgAtg1111P.1.140.000526
ORF1ab/nsp3766V766MGtgAtg1010AY.200.000389
ORF1ab/nsp3766V766MGtgAtg1010AY.250.00006
ORF1ab/nsp3766V766AgTggCg1010B.1.1770.000132
ORF1ab/nsp3766V766VgtGgtA99AY.60.00037
ORF1ab/nsp3766V766VgtGgtT68AY.250.000036
ORF1ab/nsp3766V766VgtGgtA28AY.250.000012
ORF1ab/nsp3766V766MGtgAtg88AY.430.000035
ORF1ab/nsp3766V766AgTggCg88AY.690.001493
ORF1ab/nsp3766V766VgtGgtT68B.10.000055
ORF1ab/nsp3766V766VgtGgtA28B.10.000018
ORF1ab/nsp3766V766MGtgAtg88B.1.1.5190.000318
ORF1ab/nsp3766V766VgtGgtA58B.1.360.00073
ORF1ab/nsp3766V766VgtGgtT38B.1.360.000438
ORF1ab/nsp3766V766LGtgTtg88B.1.617.20.00003
ORF1ab/nsp3766V766VgtGgtA77AY.1180.000439
ORF1ab/nsp3766V766VgtGgtA57AY.30.00005
ORF1ab/nsp3766V766VgtGgtC17AY.30.00001
ORF1ab/nsp3766V766VgtGgtT17AY.30.00001
ORF1ab/nsp3766V766VgtGgtA47B.1.10.000073
ORF1ab/nsp3766V766VgtGgtT37B.1.10.000054
ORF1ab/nsp3766V766MGtgAtg77B.1.4290.000165
ORF1ab/nsp3766V766GgTggGg66All0.000001
ORF1ab/nsp3766V766MGtgAtg66AY.1190.000212
ORF1ab/nsp3766V766VgtGgtA36AY.200.000117
ORF1ab/nsp3766V766VgtGgtT36AY.200.000117
ORF1ab/nsp3766V766del1gtGgt-66B.1.617.10.000774
ORF1ab/nsp3766V766AgTggCg66B.1.617.20.000023
ORF1ab/nsp3766V766AgTggCg55AY.430.000022
ORF1ab/nsp3766V766VgtGgtT35B.1.1.5190.000119
ORF1ab/nsp3766V766VgtGgtA25B.1.1.5190.000079
ORF1ab/nsp3766V766LGtgTtg55B.1.1.70.000004
ORF1ab/nsp3766V766VgtGgtT55B.1.177.40.001055
ORF1ab/nsp3766V766VgtGgtA55B.1.258.170.00052
ORF1ab/nsp3766V766VgtGgtA44AY.430.000018
ORF1ab/nsp3766V766MGtgAtg44B.1.177.810.000757
ORF1ab/nsp3766V766VgtGgtT44B.1.3810.03125
ORF1ab/nsp3766V766del2gTGg--23All0
ORF1ab/nsp3766V766del2GTG--N13All0
ORF1ab/nsp3766V766MGtgAtg33AY.1030.000019
ORF1ab/nsp3766V766AgTggCg33AY.1030.000019
ORF1ab/nsp3766V766LGtgTtg33AY.116.10.000934
ORF1ab/nsp3766V766MGtgAtg33AY.1170.000254
ORF1ab/nsp3766V766LGtgTtg33AY.120.000948
ORF1ab/nsp3766V766LGtgTtg33AY.120.20.003856
ORF1ab/nsp3766V766MGtgAtg33AY.39.10.000119
ORF1ab/nsp3766V766LGtgCtg23AY.40.000003
ORF1ab/nsp3766V766LGtgTtg13AY.40.000002
ORF1ab/nsp3766V766VgtGgtA33AY.4.20.000065
ORF1ab/nsp3766V766LGtgTtg33AY.430.000013
ORF1ab/nsp3766V766LGtgTtg33AY.440.000018
ORF1ab/nsp3766V766VgtGgtT33AY.610.000314
ORF1ab/nsp3766V766VgtGgtA33B0.000383
ORF1ab/nsp3766V766delGTG---33B.1.10.000054
ORF1ab/nsp3766V766MGtgAtg33B.1.10.000054
ORF1ab/nsp3766V766delGTG---33B.1.1770.00004
ORF1ab/nsp3766V766MGtgAtg33B.1.2370.014925
ORF1ab/nsp3766V766VgtGgtA33B.1.2580.0002
ORF1ab/nsp3766V766VgtGgtA33B.1.438.10.000322
ORF1ab/nsp3766V766AgTggCg33B.1.6210.000266
ORF1ab/nsp3766V766MGtgAtg33P.10.000047
ORF1ab/nsp3766V766AgTggCg33P.10.000047
ORF1ab/nsp3766V766delGTG---220.111111
ORF1ab/nsp3766V766EgTggAg22All0
ORF1ab/nsp3766V766AgTggCg22AY.1000.000092
ORF1ab/nsp3766V766VgtGgtT22AY.1000.000092
ORF1ab/nsp3766V766MGtgAtg22AY.1000.000092
ORF1ab/nsp3766V766MGtgAtg22AY.1020.000053
ORF1ab/nsp3766V766VgtGgtA22AY.116.10.000623
ORF1ab/nsp3766V766VgtGgtA22AY.120.20.002571
ORF1ab/nsp3766V766delGTG---22AY.250.000012
ORF1ab/nsp3766V766LGtGTtA12AY.250.000006
ORF1ab/nsp3766V766LGtgTtg12AY.250.000006
ORF1ab/nsp3766V766VgtGgtT22AY.270.000129
ORF1ab/nsp3766V766VgtGgtT12AY.290.000016
ORF1ab/nsp3766V766VgtGgtA12AY.290.000016
ORF1ab/nsp3766V766VgtGgtA22AY.390.000049
ORF1ab/nsp3766V766MGtgAtg22AY.39.20.003082
ORF1ab/nsp3766V766delGTG---22AY.40.000003
ORF1ab/nsp3766V766MGtgAtg22AY.4.20.000043
ORF1ab/nsp3766V766VgtGgtT22AY.4.50.000215
ORF1ab/nsp3766V766LGtgTtg22AY.450.000243
ORF1ab/nsp3766V766MGtgAtg22AY.580.001815
ORF1ab/nsp3766V766MGtgAtg22AY.7.10.000225
ORF1ab/nsp3766V766MGtgAtg22AY.790.002421
ORF1ab/nsp3766V766MGtgAtg22AY.9.20.000073
ORF1ab/nsp3766V766MGtgAtg22AY.950.001522
ORF1ab/nsp3766V766LGtgTtg22B.10.000018
ORF1ab/nsp3766V766LGtgTtg22B.1.10.000036
ORF1ab/nsp3766V766del1gtGgt-12B.1.10.000018
ORF1ab/nsp3766V766del1GTG-NN12B.1.10.000018
ORF1ab/nsp3766V766VgtGgtA22B.1.1.250.001137
ORF1ab/nsp3766V766VgtGgtA22B.1.1.3180.000604
ORF1ab/nsp3766V766AgTggCg22B.1.1.5190.000079
ORF1ab/nsp3766V766VgtGgtT22B.1.1770.000026
ORF1ab/nsp3766V766AgTggCg22B.1.177.600.000437
ORF1ab/nsp3766V766MGtgAtg22B.1.2060.001631
ORF1ab/nsp3766V766MGtgAtg22B.1.3510.000059
ORF1ab/nsp3766V766AgTggCg22B.1.3510.000059
ORF1ab/nsp3766V766delGTG---22B.1.360.000292
ORF1ab/nsp3766V766VgtGgtA22B.1.4700.002809
ORF1ab/nsp3766V766VgtGgtT12B.1.5960.000087
ORF1ab/nsp3766V766VgtGgtA12B.1.5960.000087
ORF1ab/nsp3766V766MGtgAtg22C.370.000232
ORF1ab/nsp3766V766VgtGgtC12D.20.000075
ORF1ab/nsp3766V766VgtGgtT12D.20.000075
ORF1ab/nsp3766V766VgtGgtT12P.20.000187
ORF1ab/nsp3766V766VgtGgtA12P.20.000187
ORF1ab/nsp3766V766MGtgAtg22R.10.00018
ORF1ab/nsp3766V766delGTG---11A0.000387
ORF1ab/nsp3766V766delGTG---11A.2.20.001689
ORF1ab/nsp3766V766IGtGAtT11All0
ORF1ab/nsp3766V766VgtGgtT11AY.10.000396
ORF1ab/nsp3766V766AgTggCg11AY.1020.000027
ORF1ab/nsp3766V766MGtgAtg11AY.1080.001103
ORF1ab/nsp3766V766VgtGgtA11AY.1170.000085
ORF1ab/nsp3766V766MGtgAtg11AY.1180.000063
ORF1ab/nsp3766V766VgtGgtA11AY.1190.000035
ORF1ab/nsp3766V766VgtGgtA11AY.1200.000037
ORF1ab/nsp3766V766MGtgAtg11AY.140.000088
ORF1ab/nsp3766V766VgtGgtT11AY.190.00114
ORF1ab/nsp3766V766VgtGgtA11AY.230.00007
ORF1ab/nsp3766V766AgTggCg11AY.250.000006
ORF1ab/nsp3766V766GgTggGg11AY.250.000006
ORF1ab/nsp3766V766AgTggCg11AY.260.000028
ORF1ab/nsp3766V766VgtGgtA11AY.260.000028
ORF1ab/nsp3766V766AgTggCg11AY.290.000016
ORF1ab/nsp3766V766AgTggCg11AY.30.00001
ORF1ab/nsp3766V766LGtgTtg11AY.30.00001
ORF1ab/nsp3766V766MGtgAtg11AY.3.10.000085
ORF1ab/nsp3766V766VgtGgtA11AY.380.000499
ORF1ab/nsp3766V766MGtgAtg11AY.390.000025
ORF1ab/nsp3766V766VgtGgtA11AY.39.10.00004
ORF1ab/nsp3766V766GgTggGg11AY.40.000002
ORF1ab/nsp3766V766delGTG---11AY.4.50.000107
ORF1ab/nsp3766V766VgtGgtT11AY.420.00004
ORF1ab/nsp3766V766MGtgAtg11AY.420.00004
ORF1ab/nsp3766V766GgTggGg11AY.430.000004
ORF1ab/nsp3766V766delGTG---11AY.430.000004
ORF1ab/nsp3766V766GgTggGg11AY.440.000006
ORF1ab/nsp3766V766VgtGgtT11AY.460.000104
ORF1ab/nsp3766V766MGtgAtg11AY.460.000104
ORF1ab/nsp3766V766VgtGgtA11AY.46.50.000198
ORF1ab/nsp3766V766MGtgAtg11AY.46.60.000072
ORF1ab/nsp3766V766MGtgAtg11AY.470.000031
ORF1ab/nsp3766V766VgtGgtT11AY.50.000021
ORF1ab/nsp3766V766MGtgAtg11AY.50.000021
ORF1ab/nsp3766V766VgtGgtT11AY.5.30.000337
ORF1ab/nsp3766V766del2gTGg--11AY.520.000814
ORF1ab/nsp3766V766VgtGgtT11AY.540.000095
ORF1ab/nsp3766V766MGtgAtg11AY.540.000095
ORF1ab/nsp3766V766MGtgAtg11AY.640.000595
ORF1ab/nsp3766V766LGtgTtg11AY.70.000196
ORF1ab/nsp3766V766delGTG---11AY.75.10.00018
ORF1ab/nsp3766V766VgtGgtT11AY.770.001127
ORF1ab/nsp3766V766MGtgAtg11AY.820.001357
ORF1ab/nsp3766V766MGtgAtg11AY.840.000437
ORF1ab/nsp3766V766VgtGgtA11AY.970.001701
ORF1ab/nsp3766V766MGtgAtg11AY.990.001049
ORF1ab/nsp3766V766delGTG---11AY.99.10.001553
ORF1ab/nsp3766V766VgtGgtA11AY.99.20.000092
ORF1ab/nsp3766V766AgTggCg11B.10.000009
ORF1ab/nsp3766V766del1gtGgt-11B.10.000009
ORF1ab/nsp3766V766del2GTG--N11B.10.000009
ORF1ab/nsp3766V766delGTG---11B.1.1.1390.022727
ORF1ab/nsp3766V766delGTG---11B.1.1.1420.017544
ORF1ab/nsp3766V766delGTG---11B.1.1.2180.007692
ORF1ab/nsp3766V766VgtGgtA11B.1.1.2200.001859
ORF1ab/nsp3766V766VgtGgtT11B.1.1.2220.000204
ORF1ab/nsp3766V766del1gtGgt-11B.1.1.280.000311
ORF1ab/nsp3766V766GgTggGg11B.1.1.2840.000107
ORF1ab/nsp3766V766del2gTGg--11B.1.1.3050.003861
ORF1ab/nsp3766V766VgtGgtA11B.1.1.3060.000438
ORF1ab/nsp3766V766delGTG---11B.1.1.3150.008475
ORF1ab/nsp3766V766LGtgTtg11B.1.1.3260.001761
ORF1ab/nsp3766V766MGtgAtg11B.1.1.3560.008547
ORF1ab/nsp3766V766delGTG---11B.1.1.370.000193
ORF1ab/nsp3766V766MGtgAtg11B.1.1.3750.011905
ORF1ab/nsp3766V766VgtGgtA11B.1.1.500.000679
ORF1ab/nsp3766V766del1gtGgt-11B.1.1.70.000001
ORF1ab/nsp3766V766IGtGAtT11B.1.1.70.000001
ORF1ab/nsp3766V766GgTggGg11B.1.1.70.000001
ORF1ab/nsp3766V766EgTggAg11B.1.1.70.000001
ORF1ab/nsp3766V766delGTG---11B.1.1.700.000341
ORF1ab/nsp3766V766LGtgCtg11B.1.1.890.006061
ORF1ab/nsp3766V766MGtgAtg11B.1.1110.001175
ORF1ab/nsp3766V766MGtgAtg11B.1.1390.000733
ORF1ab/nsp3766V766delGTG---11B.1.1400.018868
ORF1ab/nsp3766V766VgtGgtA11B.1.1600.000031
ORF1ab/nsp3766V766LGtgTtg11B.1.1600.000031
ORF1ab/nsp3766V766MGtgAtg11B.1.1770.000013
ORF1ab/nsp3766V766AgTggCg11B.1.177.240.001295
ORF1ab/nsp3766V766delGTG---11B.1.177.540.000606
ORF1ab/nsp3766V766VgtGgtT11B.1.177.600.000218
ORF1ab/nsp3766V766delGTG---11B.1.177.620.001192
ORF1ab/nsp3766V766delGTG---11B.1.177.630.002703
ORF1ab/nsp3766V766delGTG---11B.1.177.680.015152
ORF1ab/nsp3766V766MGtgAtg11B.1.177.730.000566
ORF1ab/nsp3766V766VgtGgtT11B.1.177.790.002342
ORF1ab/nsp3766V766del1gtGgt-11B.1.2140.003663
ORF1ab/nsp3766V766VgtGgtT11B.1.2210.000071
ORF1ab/nsp3766V766VgtGgtT11B.1.2430.00007
ORF1ab/nsp3766V766MGtgAtg11B.1.2470.014925
ORF1ab/nsp3766V766LGtgTtg11B.1.2580.000067
ORF1ab/nsp3766V766VgtGgtT11B.1.258.30.001675
ORF1ab/nsp3766V766delGTG---11B.1.2650.001271
ORF1ab/nsp3766V766MGtgAtg11B.1.3050.002151
ORF1ab/nsp3766V766delGTG---11B.1.3190.003049
ORF1ab/nsp3766V766VgtGgtT11B.1.3510.00003
ORF1ab/nsp3766V766MGtgAtg11B.1.360.000146
ORF1ab/nsp3766V766del1gtGgt-11B.1.360.000146
ORF1ab/nsp3766V766AgTggCg11B.1.360.000146
ORF1ab/nsp3766V766VgtGgtT11B.1.36.100.004785
ORF1ab/nsp3766V766del1gtGgt-11B.1.36.170.000494
ORF1ab/nsp3766V766VgtGgtA11B.1.36.170.000494
ORF1ab/nsp3766V766delGTG---11B.1.36.180.00042
ORF1ab/nsp3766V766del1gtGgt-11B.1.36.290.000517
ORF1ab/nsp3766V766EgTggAg11B.1.36.310.001751
ORF1ab/nsp3766V766VgtGgtA11B.1.3690.000285
ORF1ab/nsp3766V766MGtgAtg11B.1.3750.00082
ORF1ab/nsp3766V766MGtgAtg11B.1.3990.001934
ORF1ab/nsp3766V766VgtGgtA11B.1.4000.000429
ORF1ab/nsp3766V766delGTG---11B.1.4090.000781
ORF1ab/nsp3766V766delGTG---11B.1.4150.014286
ORF1ab/nsp3766V766VgtGgtT11B.1.4270.00005
ORF1ab/nsp3766V766MGtgAtg11B.1.4270.00005
ORF1ab/nsp3766V766LGtgTtg11B.1.4290.000024
ORF1ab/nsp3766V766VgtGgtT11B.1.4290.000024
ORF1ab/nsp3766V766MGtgAtg11B.1.4850.014925
ORF1ab/nsp3766V766MGtgAtg11B.1.5260.000024
ORF1ab/nsp3766V766del1gtGgt-11B.1.5760.000907
ORF1ab/nsp3766V766VgtGgtT11B.1.5860.010989
ORF1ab/nsp3766V766delGTG---11B.1.5960.000087
ORF1ab/nsp3766V766VgtGgtT11B.1.6020.006536
ORF1ab/nsp3766V766delGTG---11B.1.617.10.000129
ORF1ab/nsp3766V766delGTG---11B.1.617.20.000004
ORF1ab/nsp3766V766del1gtGgt-11B.1.617.20.000004
ORF1ab/nsp3766V766delGTG---11B.1.6210.000089
ORF1ab/nsp3766V766VgtGgtA11B.1.6210.000089
ORF1ab/nsp3766V766LGtgTtg11B.110.005128
ORF1ab/nsp3766V766delGTG---11B.150.017544
ORF1ab/nsp3766V766VgtGgtT11B.60.00091
ORF1ab/nsp3766V766delGTG---11C.370.000116
ORF1ab/nsp3766V766MGtgAtg11C.40.01
ORF1ab/nsp3766V766VgtGgtT11P.1.120.000484
ORF1ab/nsp3766V766VgtGgtA11P.1.140.000048
ORF1ab/nsp3766V766VgtGgtT11P.1.150.000232
ORF1ab/nsp3766V766MGtgAtg11P.70.004367