CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 765

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3765V765FV1583FnonsynGttTtt3014301415012-5014
ORF1ab/nsp3765V765VV1583VsyngtTgtC9699240.953565012-5014
ORF1ab/nsp3765V765VV1583VsyngtTgtA969320.03302375012-5014
ORF1ab/nsp3765V765VV1583VsyngtTgtG969130.01341595012-5014
ORF1ab/nsp3765V765IV1583InonsynGttAtt54354315012-5014
ORF1ab/nsp3765V765AV1583AnonsyngTtgCt19019015012-5014
ORF1ab/nsp3765V765delV1583deldelGTT---797915012-5014
ORF1ab/nsp3765V765GV1583GnonsyngTtgGt292915012-5014
ORF1ab/nsp3765V765LV1583LnonsynGttCtt17160.9411765012-5014
ORF1ab/nsp3765V765LV1583LnonsynGtTCtG1710.05882355012-5014
ORF1ab/nsp3765V765del1V1583del1delgTtg-t320.6666675012-5014
ORF1ab/nsp3765V765del1V1583del1delGtTNt-310.3333335012-5014
ORF1ab/nsp3765V765SV1583SnonsynGTtTCt210.55012-5014
ORF1ab/nsp3765V765del2V1583del2delGTt--t210.55012-5014
ORF1ab/nsp3765V765SV1583SnonsynGTtAGt210.55012-5014
ORF1ab/nsp3765V765del2V1583del2delgTTg--210.55012-5014
ORF1ab/nsp3765V765DV1583DnonsyngTtgAt1115012-5014
ORF1ab/nsp3765V765MV1583MnonsynGtTAtG1115012-5014
ORF1ab/nsp3765V765NV1583NnonsynGTtAAt1115012-5014

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3765V765FGttTtt30143014All0.000576
ORF1ab/nsp3765V765VgtTgtC924969All0.000177
ORF1ab/nsp3765V765VgtTgtA32969All0.000006
ORF1ab/nsp3765V765VgtTgtG13969All0.000002
ORF1ab/nsp3765V765FGttTtt866866B.1.1.70.000775
ORF1ab/nsp3765V765VgtTgtC751751AY.360.111309
ORF1ab/nsp3765V765IGttAtt543543All0.000104
ORF1ab/nsp3765V765FGttTtt428428B.1.2980.904863
ORF1ab/nsp3765V765IGttAtt279279B.1.1.70.00025
ORF1ab/nsp3765V765AgTtgCt190190All0.000036
ORF1ab/nsp3765V765FGttTtt168168B.1.617.20.000633
ORF1ab/nsp3765V765FGttTtt167167AY.440.001016
ORF1ab/nsp3765V765FGttTtt126126B.1.2430.008768
ORF1ab/nsp3765V765FGttTtt8585AY.60.003496
ORF1ab/nsp3765V765FGttTtt8484B.1.177.210.006423
ORF1ab/nsp3765V765FGttTtt8080AY.430.000354
ORF1ab/nsp3765V765delGTT---7979All0.000015
ORF1ab/nsp3765V765FGttTtt7979AY.40.000123
ORF1ab/nsp3765V765AgTtgCt6464AY.1190.00226
ORF1ab/nsp3765V765FGttTtt5252AY.30.000517
ORF1ab/nsp3765V765FGttTtt5252B.1.1770.000685
ORF1ab/nsp3765V765FGttTtt4949AY.1020.001299
ORF1ab/nsp3765V765FGttTtt4949AY.1030.000304
ORF1ab/nsp3765V765IGttAtt4646AY.250.000277
ORF1ab/nsp3765V765FGttTtt4646B.1.160.210.938776
ORF1ab/nsp3765V765AgTtgCt4646B.1.4270.002323
ORF1ab/nsp3765V765FGttTtt3232B.1.20.000282
ORF1ab/nsp3765V765FGttTtt3131AY.1180.001942
ORF1ab/nsp3765V765FGttTtt3030C.36.30.017016
ORF1ab/nsp3765V765GgTtgGt2929All0.000006
ORF1ab/nsp3765V765IGttAtt2929AY.440.000177
ORF1ab/nsp3765V765FGttTtt2929B.10.000266
ORF1ab/nsp3765V765FGttTtt2727AY.250.000162
ORF1ab/nsp3765V765FGttTtt2626AY.750.001457
ORF1ab/nsp3765V765FGttTtt2626B.1.6370.0019
ORF1ab/nsp3765V765VgtTgtC2525B.1.1.500.016972
ORF1ab/nsp3765V765FGttTtt2525P.10.000394
ORF1ab/nsp3765V765IGttAtt2424B.1.1.2220.004896
ORF1ab/nsp3765V765IGttAtt2424B.1.617.20.00009
ORF1ab/nsp3765V765FGttTtt2222AY.390.000544
ORF1ab/nsp3765V765delGTT---2222B.1.1.70.00002
ORF1ab/nsp3765V765VgtTgtC1422B.1.1.70.000013
ORF1ab/nsp3765V765VgtTgtA522B.1.1.70.000004
ORF1ab/nsp3765V765VgtTgtG322B.1.1.70.000003
ORF1ab/nsp3765V765VgtTgtC2222B.1.617.20.000083
ORF1ab/nsp3765V765AgTtgCt2121AY.200.000816
ORF1ab/nsp3765V765IGttAtt2020AY.30.000199
ORF1ab/nsp3765V765FGttTtt1919Q.70.021111
ORF1ab/nsp3765V765VgtTgtC1818AY.130.002898
ORF1ab/nsp3765V765FGttTtt1818AY.50.000372
ORF1ab/nsp3765V765LGttCtt1617All0.000003
ORF1ab/nsp3765V765LGtTCtG117All0
ORF1ab/nsp3765V765VgtTgtA1717B.1.1.5250.092896
ORF1ab/nsp3765V765FGttTtt1616B.1.36.220.019324
ORF1ab/nsp3765V765FGttTtt1515AY.200.000583
ORF1ab/nsp3765V765FGttTtt1515AY.9.10.001256
ORF1ab/nsp3765V765FGttTtt1414AY.4.20.000304
ORF1ab/nsp3765V765FGttTtt1414B.1.4290.000329
ORF1ab/nsp3765V765GgTtgGt1313AY.260.000368
ORF1ab/nsp3765V765delGTT---1313B.10.000119
ORF1ab/nsp3765V765IGttAtt1313B.1.10.000236
ORF1ab/nsp3765V765AgTtgCt1313P.10.000205
ORF1ab/nsp3765V765VgtTgtC1112AY.1030.000068
ORF1ab/nsp3765V765VgtTgtG112AY.1030.000006
ORF1ab/nsp3765V765FGttTtt1212B.1.258.170.001248
ORF1ab/nsp3765V765LGttCtt1111AY.850.004699
ORF1ab/nsp3765V765FGttTtt1111B.1.1600.000343
ORF1ab/nsp3765V765IGttAtt1111B.1.2430.000765
ORF1ab/nsp3765V765VgtTgtC1010AY.40.000016
ORF1ab/nsp3765V765IGttAtt1010B.1.20.000088
ORF1ab/nsp3765V765FGttTtt1010B.1.360.001459
ORF1ab/nsp3765V765VgtTgtC99AY.250.000054
ORF1ab/nsp3765V765FGttTtt99B.1.1.2140.000499
ORF1ab/nsp3765V765FGttTtt99B.1.1.3850.040179
ORF1ab/nsp3765V765IGttAtt88AY.40.000012
ORF1ab/nsp3765V765FGttTtt88AY.980.000632
ORF1ab/nsp3765V765FGttTtt88B.1.10.000145
ORF1ab/nsp3765V765FGttTtt88B.1.1.2840.000859
ORF1ab/nsp3765V765FGttTtt88B.1.1.5190.000318
ORF1ab/nsp3765V765VgtTgtC77AY.20.002493
ORF1ab/nsp3765V765FGttTtt77AY.98.10.000339
ORF1ab/nsp3765V765FGttTtt77B.1.3510.000208
ORF1ab/nsp3765V765FGttTtt77B.1.4270.000353
ORF1ab/nsp3765V765FGttTtt77Q.80.001154
ORF1ab/nsp3765V765FGttTtt66AY.1200.000223
ORF1ab/nsp3765V765FGttTtt66AY.260.00017
ORF1ab/nsp3765V765FGttTtt66AY.290.000095
ORF1ab/nsp3765V765GgTtgGt66AY.40.000009
ORF1ab/nsp3765V765FGttTtt66AY.420.000241
ORF1ab/nsp3765V765FGttTtt66AY.46.40.000987
ORF1ab/nsp3765V765AgTtgCt66B.1.1.70.000005
ORF1ab/nsp3765V765FGttTtt66B.1.1.700.002046
ORF1ab/nsp3765V765FGttTtt66B.1.5260.000141
ORF1ab/nsp3765V765IGttAtt66B.1.5990.021898
ORF1ab/nsp3765V765FGttTtt55AY.1000.00023
ORF1ab/nsp3765V765IGttAtt55AY.1030.000031
ORF1ab/nsp3765V765FGttTtt55AY.120.00158
ORF1ab/nsp3765V765AgTtgCt55AY.250.00003
ORF1ab/nsp3765V765IGttAtt55AY.430.000022
ORF1ab/nsp3765V765FGttTtt55AY.610.000524
ORF1ab/nsp3765V765IGttAtt55AY.980.000395
ORF1ab/nsp3765V765VgtTgtC55B.10.000046
ORF1ab/nsp3765V765FGttTtt55B.1.1.3710.052083
ORF1ab/nsp3765V765VgtTgtC55B.1.1.3980.016129
ORF1ab/nsp3765V765IGttAtt55B.1.1770.000066
ORF1ab/nsp3765V765FGttTtt55B.1.438.10.000536
ORF1ab/nsp3765V765FGttTtt44AY.4.50.00043
ORF1ab/nsp3765V765AgTtgCt44AY.430.000018
ORF1ab/nsp3765V765VgtTgtC44AY.440.000024
ORF1ab/nsp3765V765delGTT---44B.1.10.000073
ORF1ab/nsp3765V765FGttTtt44B.1.1.2700.041237
ORF1ab/nsp3765V765FGttTtt44B.1.1.500.002716
ORF1ab/nsp3765V765IGttAtt44B.1.1.5190.000159
ORF1ab/nsp3765V765FGttTtt44B.1.5750.001214
ORF1ab/nsp3765V765IGttAtt44B.1.6210.000354
ORF1ab/nsp3765V765FGttTtt44B.1.6210.000354
ORF1ab/nsp3765V765FGttTtt44P.1.170.000647
ORF1ab/nsp3765V765del1gTtg-t23All0
ORF1ab/nsp3765V765del1GtTNt-13All0
ORF1ab/nsp3765V765AgTtgCt33AY.1030.000019
ORF1ab/nsp3765V765AgTtgCt33AY.1200.000112
ORF1ab/nsp3765V765IGttAtt33AY.230.000209
ORF1ab/nsp3765V765IGttAtt33AY.290.000047
ORF1ab/nsp3765V765FGttTtt33AY.29.10.000662
ORF1ab/nsp3765V765VgtTgtA23AY.30.00002
ORF1ab/nsp3765V765VgtTgtC13AY.30.00001
ORF1ab/nsp3765V765VgtTgtC33AY.390.000074
ORF1ab/nsp3765V765FGttTtt33AY.450.000365
ORF1ab/nsp3765V765VgtTgtC33AY.500.002398
ORF1ab/nsp3765V765FGttTtt33AY.680.000821
ORF1ab/nsp3765V765FGttTtt33AY.700.000626
ORF1ab/nsp3765V765VgtTgtC33AY.920.000862
ORF1ab/nsp3765V765FGttTtt33B0.000383
ORF1ab/nsp3765V765IGttAtt33B.10.000027
ORF1ab/nsp3765V765IGttAtt33B.1.1.2990.036585
ORF1ab/nsp3765V765FGttTtt33B.1.1.3180.000905
ORF1ab/nsp3765V765delGTT---33B.1.1770.00004
ORF1ab/nsp3765V765VgtTgtC33B.1.20.000026
ORF1ab/nsp3765V765FGttTtt33B.1.258.140.002941
ORF1ab/nsp3765V765FGttTtt33B.1.36.80.003
ORF1ab/nsp3765V765FGttTtt33B.1.6180.012097
ORF1ab/nsp3765V765FGttTtt33P.1.70.000958
ORF1ab/nsp3765V765delGTT---220.111111
ORF1ab/nsp3765V765AgTtgCt220.111111
ORF1ab/nsp3765V765SGTtAGt12All0
ORF1ab/nsp3765V765SGTtTCt12All0
ORF1ab/nsp3765V765del2gTTg--12All0
ORF1ab/nsp3765V765del2GTt--t12All0
ORF1ab/nsp3765V765FGttTtt22AY.1170.000169
ORF1ab/nsp3765V765VgtTgtG22AY.1190.000071
ORF1ab/nsp3765V765FGttTtt22AY.130.000322
ORF1ab/nsp3765V765FGttTtt22AY.160.000759
ORF1ab/nsp3765V765FGttTtt22AY.190.002281
ORF1ab/nsp3765V765delGTT---22AY.250.000012
ORF1ab/nsp3765V765IGttAtt22AY.260.000057
ORF1ab/nsp3765V765AgTtgCt22AY.30.00002
ORF1ab/nsp3765V765VgtTgtC22AY.330.000134
ORF1ab/nsp3765V765VgtTgtC22AY.39.10.000079
ORF1ab/nsp3765V765delGTT---22AY.40.000003
ORF1ab/nsp3765V765VgtTgtG22AY.430.000009
ORF1ab/nsp3765V765AgTtgCt22AY.440.000012
ORF1ab/nsp3765V765VgtTgtC22AY.460.000208
ORF1ab/nsp3765V765FGttTtt22AY.470.000062
ORF1ab/nsp3765V765FGttTtt22AY.600.001876
ORF1ab/nsp3765V765FGttTtt22AY.7.10.000225
ORF1ab/nsp3765V765FGttTtt22AY.730.001331
ORF1ab/nsp3765V765FGttTtt22AY.9.20.000073
ORF1ab/nsp3765V765FGttTtt22AY.920.000575
ORF1ab/nsp3765V765AgTtgCt22B.10.000018
ORF1ab/nsp3765V765del1gTtg-t12B.10.000009
ORF1ab/nsp3765V765del1GtTNt-12B.10.000009
ORF1ab/nsp3765V765FGttTtt22B.1.1.2790.002242
ORF1ab/nsp3765V765FGttTtt22B.1.1.280.000622
ORF1ab/nsp3765V765GgTtgGt22B.1.1770.000026
ORF1ab/nsp3765V765LGttCtt12B.1.1770.000013
ORF1ab/nsp3765V765LGtTCtG12B.1.1770.000013
ORF1ab/nsp3765V765VgtTgtA22B.1.177.810.000379
ORF1ab/nsp3765V765LGttCtt22B.1.20.000018
ORF1ab/nsp3765V765AgTtgCt22B.1.20.000018
ORF1ab/nsp3765V765FGttTtt22B.1.2340.000264
ORF1ab/nsp3765V765VgtTgtC22B.1.3510.000059
ORF1ab/nsp3765V765delGTT---22B.1.360.000292
ORF1ab/nsp3765V765AgTtgCt22B.1.3690.00057
ORF1ab/nsp3765V765FGttTtt22B.1.3960.001411
ORF1ab/nsp3765V765VgtTgtA22B.1.4270.000101
ORF1ab/nsp3765V765AgTtgCt22B.1.5260.000047
ORF1ab/nsp3765V765FGttTtt22B.1.5960.000174
ORF1ab/nsp3765V765FGttTtt22B.1.617.10.000258
ORF1ab/nsp3765V765VgtTgtG22B.1.80.003945
ORF1ab/nsp3765V765IGttAtt22B.60.00182
ORF1ab/nsp3765V765FGttTtt22P.1.120.000968
ORF1ab/nsp3765V765delGTT---11A0.000387
ORF1ab/nsp3765V765delGTT---11A.2.20.001689
ORF1ab/nsp3765V765FGttTtt11A.2.20.001689
ORF1ab/nsp3765V765IGttAtt11A.2.40.003367
ORF1ab/nsp3765V765FGttTtt11A.30.002096
ORF1ab/nsp3765V765NGTtAAt11All0
ORF1ab/nsp3765V765MGtTAtG11All0
ORF1ab/nsp3765V765DgTtgAt11All0
ORF1ab/nsp3765V765IGttAtt11AU.10.001266
ORF1ab/nsp3765V765VgtTgtC11AY.1000.000046
ORF1ab/nsp3765V765IGttAtt11AY.1020.000027
ORF1ab/nsp3765V765FGttTtt11AY.1060.000335
ORF1ab/nsp3765V765FGttTtt11AY.1100.000113
ORF1ab/nsp3765V765FGttTtt11AY.1110.000183
ORF1ab/nsp3765V765IGttAtt11AY.1170.000085
ORF1ab/nsp3765V765AgTtgCt11AY.1180.000063
ORF1ab/nsp3765V765GgTtgGt11AY.1200.000037
ORF1ab/nsp3765V765FGttTtt11AY.16.10.00047
ORF1ab/nsp3765V765VgtTgtC11AY.230.00007
ORF1ab/nsp3765V765AgTtgCt11AY.23.10.000417
ORF1ab/nsp3765V765VgtTgtC11AY.260.000028
ORF1ab/nsp3765V765FGttTtt11AY.270.000065
ORF1ab/nsp3765V765SGTtTCt11AY.30.00001
ORF1ab/nsp3765V765del2GTt--t11AY.30.00001
ORF1ab/nsp3765V765FGttTtt11AY.310.018519
ORF1ab/nsp3765V765VgtTgtC11AY.340.000097
ORF1ab/nsp3765V765FGttTtt11AY.340.000097
ORF1ab/nsp3765V765FGttTtt11AY.360.000148
ORF1ab/nsp3765V765AgTtgCt11AY.390.000025
ORF1ab/nsp3765V765FGttTtt11AY.39.10.00004
ORF1ab/nsp3765V765IGttAtt11AY.4.20.000022
ORF1ab/nsp3765V765IGttAtt11AY.4.30.000842
ORF1ab/nsp3765V765FGttTtt11AY.4.30.000842
ORF1ab/nsp3765V765FGttTtt11AY.4.40.000409
ORF1ab/nsp3765V765VgtTgtC11AY.4.40.000409
ORF1ab/nsp3765V765delGTT---11AY.4.50.000107
ORF1ab/nsp3765V765delGTT---11AY.430.000004
ORF1ab/nsp3765V765IGttAtt11AY.460.000104
ORF1ab/nsp3765V765FGttTtt11AY.460.000104
ORF1ab/nsp3765V765FGttTtt11AY.46.10.001027
ORF1ab/nsp3765V765FGttTtt11AY.46.50.000198
ORF1ab/nsp3765V765IGttAtt11AY.46.60.000072
ORF1ab/nsp3765V765FGttTtt11AY.46.60.000072
ORF1ab/nsp3765V765AgTtgCt11AY.50.000021
ORF1ab/nsp3765V765VgtTgtC11AY.5.30.000337
ORF1ab/nsp3765V765FGttTtt11AY.540.000095
ORF1ab/nsp3765V765FGttTtt11AY.550.000917
ORF1ab/nsp3765V765GgTtgGt11AY.610.000105
ORF1ab/nsp3765V765IGttAtt11AY.690.000187
ORF1ab/nsp3765V765FGttTtt11AY.690.000187
ORF1ab/nsp3765V765IGttAtt11AY.710.000475
ORF1ab/nsp3765V765VgtTgtC11AY.730.000665
ORF1ab/nsp3765V765delGTT---11AY.75.10.00018
ORF1ab/nsp3765V765FGttTtt11AY.75.10.00018
ORF1ab/nsp3765V765VgtTgtC11AY.790.001211
ORF1ab/nsp3765V765FGttTtt11AY.80.000606
ORF1ab/nsp3765V765FGttTtt11AY.820.001357
ORF1ab/nsp3765V765FGttTtt11AY.850.000427
ORF1ab/nsp3765V765VgtTgtC11AY.90.000068
ORF1ab/nsp3765V765FGttTtt11AY.910.00073
ORF1ab/nsp3765V765FGttTtt11AY.940.000443
ORF1ab/nsp3765V765VgtTgtC11AY.970.001701
ORF1ab/nsp3765V765VgtTgtC11AY.980.000079
ORF1ab/nsp3765V765IGttAtt11AY.98.10.000048
ORF1ab/nsp3765V765FGttTtt11AY.990.001049
ORF1ab/nsp3765V765delGTT---11AY.99.10.001553
ORF1ab/nsp3765V765FGttTtt11AY.99.20.000092
ORF1ab/nsp3765V765AgTtgCt11B0.000128
ORF1ab/nsp3765V765VgtTgtC11B0.000128
ORF1ab/nsp3765V765delGTT---11B0.000128
ORF1ab/nsp3765V765GgTtgGt11B.10.000009
ORF1ab/nsp3765V765VgtTgtC11B.1.10.000018
ORF1ab/nsp3765V765GgTtgGt11B.1.10.000018
ORF1ab/nsp3765V765delGTT---11B.1.1.1390.022727
ORF1ab/nsp3765V765delGTT---11B.1.1.1420.017544
ORF1ab/nsp3765V765IGttAtt11B.1.1.1570.000913
ORF1ab/nsp3765V765FGttTtt11B.1.1.1600.02381
ORF1ab/nsp3765V765FGttTtt11B.1.1.1920.002309
ORF1ab/nsp3765V765VgtTgtC11B.1.1.1920.002309
ORF1ab/nsp3765V765VgtTgtC11B.1.1.2100.005714
ORF1ab/nsp3765V765delGTT---11B.1.1.2180.007692
ORF1ab/nsp3765V765FGttTtt11B.1.1.2310.003096
ORF1ab/nsp3765V765FGttTtt11B.1.1.2690.001353
ORF1ab/nsp3765V765FGttTtt11B.1.1.3110.000358
ORF1ab/nsp3765V765delGTT---11B.1.1.3150.008475
ORF1ab/nsp3765V765FGttTtt11B.1.1.330.000421
ORF1ab/nsp3765V765FGttTtt11B.1.1.3350.012987
ORF1ab/nsp3765V765FGttTtt11B.1.1.3450.043478
ORF1ab/nsp3765V765delGTT---11B.1.1.370.000193
ORF1ab/nsp3765V765VgtTgtC11B.1.1.4130.006897
ORF1ab/nsp3765V765VgtTgtC11B.1.1.4370.010417
ORF1ab/nsp3765V765AgTtgCt11B.1.1.5190.00004
ORF1ab/nsp3765V765IGttAtt11B.1.1.5210.005348
ORF1ab/nsp3765V765IGttAtt11B.1.1.590.006494
ORF1ab/nsp3765V765DgTtgAt11B.1.1.70.000001
ORF1ab/nsp3765V765GgTtgGt11B.1.1.70.000001
ORF1ab/nsp3765V765delGTT---11B.1.1.700.000341
ORF1ab/nsp3765V765IGttAtt11B.1.110.30.000718
ORF1ab/nsp3765V765IGttAtt11B.1.1110.001175
ORF1ab/nsp3765V765IGttAtt11B.1.1150.021739
ORF1ab/nsp3765V765FGttTtt11B.1.1260.001276
ORF1ab/nsp3765V765delGTT---11B.1.1400.018868
ORF1ab/nsp3765V765AgTtgCt11B.1.1570.002985
ORF1ab/nsp3765V765IGttAtt11B.1.1570.002985
ORF1ab/nsp3765V765FGttTtt11B.1.1570.002985
ORF1ab/nsp3765V765IGttAtt11B.1.1600.000031
ORF1ab/nsp3765V765IGttAtt11B.1.1640.014925
ORF1ab/nsp3765V765AgTtgCt11B.1.1770.000013
ORF1ab/nsp3765V765VgtTgtG11B.1.1770.000013
ORF1ab/nsp3765V765MGtTAtG11B.1.1770.000013
ORF1ab/nsp3765V765FGttTtt11B.1.177.450.000381
ORF1ab/nsp3765V765delGTT---11B.1.177.540.000606
ORF1ab/nsp3765V765delGTT---11B.1.177.620.001192
ORF1ab/nsp3765V765delGTT---11B.1.177.630.002703
ORF1ab/nsp3765V765delGTT---11B.1.177.680.015152
ORF1ab/nsp3765V765IGttAtt11B.1.177.70.000165
ORF1ab/nsp3765V765IGttAtt11B.1.177.810.000189
ORF1ab/nsp3765V765delGTT---11B.1.20.000009
ORF1ab/nsp3765V765del1gTtg-t11B.1.20.000009
ORF1ab/nsp3765V765FGttTtt11B.1.2060.000816
ORF1ab/nsp3765V765VgtTgtA11B.1.214.30.007143
ORF1ab/nsp3765V765FGttTtt11B.1.2210.000071
ORF1ab/nsp3765V765VgtTgtC11B.1.2230.002778
ORF1ab/nsp3765V765VgtTgtC11B.1.2340.000132
ORF1ab/nsp3765V765FGttTtt11B.1.2520.006623
ORF1ab/nsp3765V765VgtTgtC11B.1.2580.000067
ORF1ab/nsp3765V765IGttAtt11B.1.2580.000067
ORF1ab/nsp3765V765del2gTTg--11B.1.2650.001271
ORF1ab/nsp3765V765IGttAtt11B.1.3110.000275
ORF1ab/nsp3765V765FGttTtt11B.1.3110.000275
ORF1ab/nsp3765V765delGTT---11B.1.3190.003049
ORF1ab/nsp3765V765FGttTtt11B.1.3400.004292
ORF1ab/nsp3765V765SGTtAGt11B.1.351.20.000303
ORF1ab/nsp3765V765delGTT---11B.1.36.180.00042
ORF1ab/nsp3765V765IGttAtt11B.1.36.220.001208
ORF1ab/nsp3765V765IGttAtt11B.1.36.290.000517
ORF1ab/nsp3765V765FGttTtt11B.1.36.290.000517
ORF1ab/nsp3765V765VgtTgtC11B.1.3690.000285
ORF1ab/nsp3765V765delGTT---11B.1.4090.000781
ORF1ab/nsp3765V765delGTT---11B.1.4150.014286
ORF1ab/nsp3765V765LGttCtt11B.1.4160.001269
ORF1ab/nsp3765V765VgtTgtA11B.1.438.10.000107
ORF1ab/nsp3765V765FGttTtt11B.1.5250.000113
ORF1ab/nsp3765V765IGttAtt11B.1.5260.000024
ORF1ab/nsp3765V765VgtTgtA11B.1.5260.000024
ORF1ab/nsp3765V765VgtTgtC11B.1.5640.000426
ORF1ab/nsp3765V765AgTtgCt11B.1.5640.000426
ORF1ab/nsp3765V765FGttTtt11B.1.5740.002151
ORF1ab/nsp3765V765VgtTgtG11B.1.5800.004065
ORF1ab/nsp3765V765FGttTtt11B.1.5950.000261
ORF1ab/nsp3765V765delGTT---11B.1.5960.000087
ORF1ab/nsp3765V765IGttAtt11B.1.5960.000087
ORF1ab/nsp3765V765delGTT---11B.1.617.10.000129
ORF1ab/nsp3765V765NGTtAAt11B.1.617.10.000129
ORF1ab/nsp3765V765delGTT---11B.1.617.20.000004
ORF1ab/nsp3765V765delGTT---11B.1.6210.000089
ORF1ab/nsp3765V765FGttTtt11B.1.6260.005714
ORF1ab/nsp3765V765VgtTgtA11B.1.6370.000073
ORF1ab/nsp3765V765AgTtgCt11B.1.80.001972
ORF1ab/nsp3765V765FGttTtt11B.150.017544
ORF1ab/nsp3765V765delGTT---11B.150.017544
ORF1ab/nsp3765V765FGttTtt11C.300.001727
ORF1ab/nsp3765V765GgTtgGt11C.370.000116
ORF1ab/nsp3765V765delGTT---11C.370.000116
ORF1ab/nsp3765V765VgtTgtG11D.20.000075
ORF1ab/nsp3765V765FGttTtt11D.20.000075
ORF1ab/nsp3765V765AgTtgCt11D.20.000075
ORF1ab/nsp3765V765LGttCtt11P.10.000016
ORF1ab/nsp3765V765GgTtgGt11P.10.000016
ORF1ab/nsp3765V765FGttTtt11P.1.100.000269
ORF1ab/nsp3765V765FGttTtt11P.1.140.000048
ORF1ab/nsp3765V765GgTtgGt11P.30.001595
ORF1ab/nsp3765V765IGttAtt11P.30.001595
ORF1ab/nsp3765V765FGttTtt11P.30.001595
ORF1ab/nsp3765V765FGttTtt11P.40.003802
ORF1ab/nsp3765V765FGttTtt11Q.10.000126
ORF1ab/nsp3765V765FGttTtt11Q.40.000455

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.