CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 76

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp376G76DG894DnonsyngGcgAc1386138612945-2947
ORF1ab/nsp376G76CG894CnonsynGgcTgc116211600.9982792945-2947
ORF1ab/nsp376G76CG894CnonsynGgCTgT116220.001721172945-2947
ORF1ab/nsp376G76GG894GsynggCggT109010640.9761472945-2947
ORF1ab/nsp376G76GG894GsynggCggA1090200.01834862945-2947
ORF1ab/nsp376G76GG894GsynggCggG109060.005504592945-2947
ORF1ab/nsp376G76SG894SnonsynGgcAgc75175112945-2947
ORF1ab/nsp376G76delG894deldelGGC---464612945-2947
ORF1ab/nsp376G76VG894VnonsyngGcgTc252512945-2947
ORF1ab/nsp376G76del1G894del1delGgC-gT730.4285712945-2947
ORF1ab/nsp376G76del1G894del1delggCgg-720.2857142945-2947
ORF1ab/nsp376G76del1G894del1delGGC-CT710.1428572945-2947
ORF1ab/nsp376G76del1G894del1delGgc-gc710.1428572945-2947
ORF1ab/nsp376G76NG894NnonsynGGcAAc430.752945-2947
ORF1ab/nsp376G76NG894NnonsynGGCAAT410.252945-2947
ORF1ab/nsp376G76RG894RnonsynGgcCgc320.6666672945-2947
ORF1ab/nsp376G76RG894RnonsynGgCAgA310.3333332945-2947
ORF1ab/nsp376G76WG894WnonsynGgCTgG2212945-2947
ORF1ab/nsp376G76XG894XnonsynGGCTAG2212945-2947
ORF1ab/nsp376G76YG894YnonsynGGcTAc2212945-2947
ORF1ab/nsp376G76KG894KnonsynGGCAAG2212945-2947
ORF1ab/nsp376G76LG894LnonsynGGCCTT2212945-2947
ORF1ab/nsp376G76AG894AnonsyngGCgCT210.52945-2947
ORF1ab/nsp376G76AG894AnonsyngGcgCc210.52945-2947

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp376G76DgGcgAc13861386All0.000265
ORF1ab/nsp376G76CGgcTgc11601162All0.000222
ORF1ab/nsp376G76CGgCTgT21162All0
ORF1ab/nsp376G76GggCggT10641090All0.000204
ORF1ab/nsp376G76GggCggA201090All0.000004
ORF1ab/nsp376G76GggCggG61090All0.000001
ORF1ab/nsp376G76DgGcgAc10601060AY.390.026194
ORF1ab/nsp376G76SGgcAgc751751All0.000144
ORF1ab/nsp376G76CGgcTgc503503B.1.1.70.00045
ORF1ab/nsp376G76GggCggT193199B.1.1.70.000173
ORF1ab/nsp376G76GggCggG3199B.1.1.70.000003
ORF1ab/nsp376G76GggCggA3199B.1.1.70.000003
ORF1ab/nsp376G76CGgcTgc182182B.1.20.001603
ORF1ab/nsp376G76SGgcAgc182182B.1.6210.01611
ORF1ab/nsp376G76GggCggT124124P.10.001953
ORF1ab/nsp376G76SGgcAgc108108B.1.1.70.000097
ORF1ab/nsp376G76DgGcgAc9999AY.1190.003496
ORF1ab/nsp376G76GggCggT9191B.1.20.000801
ORF1ab/nsp376G76GggCggT7676B.1.4690.274368
ORF1ab/nsp376G76GggCggT7272B.1.4060.436364
ORF1ab/nsp376G76GggCggT5960AY.40.000092
ORF1ab/nsp376G76GggCggA160AY.40.000002
ORF1ab/nsp376G76SGgcAgc5454AY.1030.000335
ORF1ab/nsp376G76GggCggT5253B.1.617.20.000196
ORF1ab/nsp376G76GggCggA153B.1.617.20.000004
ORF1ab/nsp376G76CGgcTgc5252P.1.10.016518
ORF1ab/nsp376G76DgGcgAc4949B.10.000449
ORF1ab/nsp376G76GggCggT4849B.1.5250.005432
ORF1ab/nsp376G76GggCggA149B.1.5250.000113
ORF1ab/nsp376G76delGGC---4646All0.000009
ORF1ab/nsp376G76SGgcAgc4141AY.440.00025
ORF1ab/nsp376G76GggCggT3535AY.250.000211
ORF1ab/nsp376G76CGgcTgc3434B.1.617.20.000128
ORF1ab/nsp376G76SGgcAgc3232B.10.000293
ORF1ab/nsp376G76SGgcAgc3232B.1.177.160.021262
ORF1ab/nsp376G76CGgcTgc2929AY.1030.00018
ORF1ab/nsp376G76CGgcTgc2929AY.40.000045
ORF1ab/nsp376G76SGgcAgc2626AY.40.00004
ORF1ab/nsp376G76GggCggT2626AY.440.000158
ORF1ab/nsp376G76VgGcgTc2525All0.000005
ORF1ab/nsp376G76SGgcAgc2525B.1.1770.000329
ORF1ab/nsp376G76CGgcTgc2424AY.250.000144
ORF1ab/nsp376G76SGgcAgc2424B.1.1940.96
ORF1ab/nsp376G76SGgcAgc2323B.1.20.000203
ORF1ab/nsp376G76GggCggT2122AY.430.000093
ORF1ab/nsp376G76GggCggA122AY.430.000004
ORF1ab/nsp376G76GggCggT2122B.1.1.700.007162
ORF1ab/nsp376G76GggCggA122B.1.1.700.000341
ORF1ab/nsp376G76DgGcgAc2222B.1.617.20.000083
ORF1ab/nsp376G76CGgcTgc2222Q.80.003628
ORF1ab/nsp376G76GggCggT2021AY.1020.00053
ORF1ab/nsp376G76GggCggA121AY.1020.000027
ORF1ab/nsp376G76CGgcTgc2121P.10.000331
ORF1ab/nsp376G76GggCggT2020AY.20.007123
ORF1ab/nsp376G76CGgcTgc2020AY.430.000089
ORF1ab/nsp376G76SGgcAgc1818AY.240.007759
ORF1ab/nsp376G76DgGcgAc1818B.1.1.70.000016
ORF1ab/nsp376G76GggCggT1717B.10.000156
ORF1ab/nsp376G76CGgcTgc1717B.10.000156
ORF1ab/nsp376G76CGgcTgc1616AY.120.10.005136
ORF1ab/nsp376G76SGgcAgc1616AY.200.000622
ORF1ab/nsp376G76SGgcAgc1616B.1.617.20.00006
ORF1ab/nsp376G76CGgcTgc1313AY.1020.000345
ORF1ab/nsp376G76CGgcTgc1111AY.350.002564
ORF1ab/nsp376G76DgGcgAc1111AY.40.000017
ORF1ab/nsp376G76GggCggT1011B.1.10.000181
ORF1ab/nsp376G76GggCggG111B.1.10.000018
ORF1ab/nsp376G76CGgcTgc1010AY.50.000206
ORF1ab/nsp376G76SGgcAgc1010B.1.110.11
ORF1ab/nsp376G76GggCggT1010B.1.1600.000312
ORF1ab/nsp376G76GggCggT99AY.1030.000056
ORF1ab/nsp376G76SGgcAgc99AY.390.000222
ORF1ab/nsp376G76DgGcgAc99AY.440.000055
ORF1ab/nsp376G76SGgcAgc99AY.60.00037
ORF1ab/nsp376G76delGGC---99B.1.1.70.000008
ORF1ab/nsp376G76CGgcTgc99B.1.2360.01848
ORF1ab/nsp376G76GggCggT99B.1.3510.000268
ORF1ab/nsp376G76DgGcgAc99B.1.6370.000658
ORF1ab/nsp376G76DgGcgAc99P.10.000142
ORF1ab/nsp376G76SGgcAgc99P.10.000142
ORF1ab/nsp376G76CGgcTgc88AY.30.00008
ORF1ab/nsp376G76GggCggT88B.1.1.3110.002865
ORF1ab/nsp376G76GggCggT88B.1.1.4320.010127
ORF1ab/nsp376G76DgGcgAc88B.1.3510.000238
ORF1ab/nsp376G76del1GgC-gT37All0.000001
ORF1ab/nsp376G76del1ggCgg-27All0
ORF1ab/nsp376G76del1GGC-CT17All0
ORF1ab/nsp376G76del1Ggc-gc17All0
ORF1ab/nsp376G76CGgcTgc77AY.200.000272
ORF1ab/nsp376G76VgGcgTc77AY.260.000198
ORF1ab/nsp376G76CGgcTgc77AY.440.000043
ORF1ab/nsp376G76DgGcgAc77B.1.1.3180.002112
ORF1ab/nsp376G76CGgcTgc77B.1.6300.036649
ORF1ab/nsp376G76SGgcAgc77C.36.30.003971
ORF1ab/nsp376G76DgGcgAc66AY.1030.000037
ORF1ab/nsp376G76GggCggA56AY.240.002155
ORF1ab/nsp376G76GggCggT16AY.240.000431
ORF1ab/nsp376G76SGgcAgc66AY.250.000036
ORF1ab/nsp376G76CGgcTgc66AY.260.00017
ORF1ab/nsp376G76SGgcAgc66AY.30.00006
ORF1ab/nsp376G76GggCggT66AY.4.20.00013
ORF1ab/nsp376G76CGgcTgc46AY.99.20.000369
ORF1ab/nsp376G76CGgCTgT26AY.99.20.000184
ORF1ab/nsp376G76GggCggT66B.1.6370.000438
ORF1ab/nsp376G76SGgcAgc55AY.230.000349
ORF1ab/nsp376G76CGgcTgc55AY.280.009452
ORF1ab/nsp376G76GggCggT55AY.30.00005
ORF1ab/nsp376G76CGgcTgc55AY.330.000334
ORF1ab/nsp376G76CGgcTgc55AY.420.000201
ORF1ab/nsp376G76SGgcAgc55AY.430.000022
ORF1ab/nsp376G76GggCggT55AY.50.000103
ORF1ab/nsp376G76CGgcTgc55AY.610.000524
ORF1ab/nsp376G76CGgcTgc55AY.710.002375
ORF1ab/nsp376G76CGgcTgc55AY.750.00028
ORF1ab/nsp376G76CGgcTgc55AY.98.10.000242
ORF1ab/nsp376G76CGgcTgc55B.1.10.000091
ORF1ab/nsp376G76SGgcAgc55B.1.177.80.003762
ORF1ab/nsp376G76DgGcgAc55B.1.20.000044
ORF1ab/nsp376G76NGGcAAc34All0.000001
ORF1ab/nsp376G76NGGCAAT14All0
ORF1ab/nsp376G76DgGcgAc44AY.1020.000106
ORF1ab/nsp376G76CGgcTgc44AY.1180.000251
ORF1ab/nsp376G76GggCggT44AY.1200.000149
ORF1ab/nsp376G76GggCggT44AY.1210.000541
ORF1ab/nsp376G76DgGcgAc44AY.250.000024
ORF1ab/nsp376G76CGgcTgc44AY.270.000259
ORF1ab/nsp376G76GggCggT44AY.330.000267
ORF1ab/nsp376G76GggCggT44AY.4.2.10.000596
ORF1ab/nsp376G76CGgcTgc44AY.570.002625
ORF1ab/nsp376G76SGgcAgc44B.1.10.000073
ORF1ab/nsp376G76DgGcgAc44B.1.10.000073
ORF1ab/nsp376G76SGgcAgc44B.1.1.5190.000159
ORF1ab/nsp376G76GggCggT44B.1.1770.000053
ORF1ab/nsp376G76SGgcAgc44B.1.4740.007605
ORF1ab/nsp376G76delGGC---44B.1.617.20.000015
ORF1ab/nsp376G76GggCggT44C.370.000464
ORF1ab/nsp376G76RGgcCgc23All0
ORF1ab/nsp376G76RGgCAgA13All0
ORF1ab/nsp376G76GggCggT33AY.140.000264
ORF1ab/nsp376G76DgGcgAc33AY.160.001139
ORF1ab/nsp376G76GggCggT33AY.220.006276
ORF1ab/nsp376G76DgGcgAc33AY.30.00003
ORF1ab/nsp376G76VgGcgTc33AY.40.000005
ORF1ab/nsp376G76DgGcgAc33AY.430.000013
ORF1ab/nsp376G76DgGcgAc33AY.470.000093
ORF1ab/nsp376G76SGgcAgc33AY.590.001589
ORF1ab/nsp376G76GggCggT33AY.9.10.000251
ORF1ab/nsp376G76DgGcgAc33AY.980.000237
ORF1ab/nsp376G76SGgcAgc33AY.99.20.000276
ORF1ab/nsp376G76delGGC---33B.10.000027
ORF1ab/nsp376G76del1ggCgg-23B.10.000018
ORF1ab/nsp376G76del1GgC-gT13B.10.000009
ORF1ab/nsp376G76delGGC---33B.1.1.330.001263
ORF1ab/nsp376G76VgGcgTc33B.1.1.70.000003
ORF1ab/nsp376G76GggCggT33B.1.2430.000209
ORF1ab/nsp376G76GggCggT33B.1.3320.01049
ORF1ab/nsp376G76CGgcTgc33B.1.3510.000089
ORF1ab/nsp376G76GggCggT33B.1.4290.000071
ORF1ab/nsp376G76CGgcTgc33B.1.5260.000071
ORF1ab/nsp376G76GggCggT33B.1.5260.000071
ORF1ab/nsp376G76GggCggT33P.1.140.000143
ORF1ab/nsp376G76CGgcTgc33P.1.160.001122
ORF1ab/nsp376G76LGGCCTT220.111111
ORF1ab/nsp376G76XGGCTAG220.111111
ORF1ab/nsp376G76delGGC---220.111111
ORF1ab/nsp376G76YGGcTAc220.111111
ORF1ab/nsp376G76KGGCAAG220.111111
ORF1ab/nsp376G76NGGcAAc220.111111
ORF1ab/nsp376G76SGgcAgc22AD.20.000438
ORF1ab/nsp376G76LGGCCTT22All0
ORF1ab/nsp376G76KGGCAAG22All0
ORF1ab/nsp376G76YGGcTAc22All0
ORF1ab/nsp376G76XGGCTAG22All0
ORF1ab/nsp376G76WGgCTgG22All0
ORF1ab/nsp376G76AgGcgCc12All0
ORF1ab/nsp376G76AgGCgCT12All0
ORF1ab/nsp376G76GggCggT22AY.1000.000092
ORF1ab/nsp376G76CGgcTgc22AY.1060.00067
ORF1ab/nsp376G76GggCggT22AY.1080.002205
ORF1ab/nsp376G76GggCggT22AY.1130.000285
ORF1ab/nsp376G76CGgcTgc22AY.1190.000071
ORF1ab/nsp376G76CGgcTgc22AY.130.000322
ORF1ab/nsp376G76SGgcAgc22AY.20.000712
ORF1ab/nsp376G76DgGcgAc22AY.230.000139
ORF1ab/nsp376G76DgGcgAc22AY.260.000057
ORF1ab/nsp376G76GggCggT22AY.290.000032
ORF1ab/nsp376G76CGgcTgc22AY.3.10.000171
ORF1ab/nsp376G76DgGcgAc22AY.3.10.000171
ORF1ab/nsp376G76CGgcTgc22AY.390.000049
ORF1ab/nsp376G76GggCggT22AY.420.00008
ORF1ab/nsp376G76RGgcCgc22AY.440.000012
ORF1ab/nsp376G76CGgcTgc22AY.450.000243
ORF1ab/nsp376G76CGgcTgc22AY.460.000208
ORF1ab/nsp376G76VgGcgTc22AY.470.000062
ORF1ab/nsp376G76DgGcgAc22AY.5.30.000675
ORF1ab/nsp376G76GggCggT22AY.590.001059
ORF1ab/nsp376G76GggCggT22AY.60.000082
ORF1ab/nsp376G76CGgcTgc22AY.7.20.001119
ORF1ab/nsp376G76SGgcAgc22AY.720.002721
ORF1ab/nsp376G76DgGcgAc22AY.9.20.000073
ORF1ab/nsp376G76GggCggT22AY.920.000575
ORF1ab/nsp376G76SGgcAgc22B0.000256
ORF1ab/nsp376G76DgGcgAc22B.1.1.2160.001781
ORF1ab/nsp376G76GggCggA22B.1.1.2840.000215
ORF1ab/nsp376G76delGGC---22B.1.1.3480.001592
ORF1ab/nsp376G76GggCggT22B.1.1.5190.000079
ORF1ab/nsp376G76DgGcgAc22B.1.160.80.002577
ORF1ab/nsp376G76DgGcgAc22B.1.1770.000026
ORF1ab/nsp376G76CGgcTgc22B.1.177.200.003035
ORF1ab/nsp376G76CGgcTgc22B.1.177.410.005
ORF1ab/nsp376G76DgGcgAc22B.1.177.450.000762
ORF1ab/nsp376G76delGGC---22B.1.20.000018
ORF1ab/nsp376G76GggCggG22B.1.2340.000264
ORF1ab/nsp376G76DgGcgAc22B.1.2340.000264
ORF1ab/nsp376G76SGgcAgc22B.1.2350.005038
ORF1ab/nsp376G76SGgcAgc22B.1.3510.000059
ORF1ab/nsp376G76DgGcgAc22B.1.3980.005952
ORF1ab/nsp376G76DgGcgAc22B.1.4290.000047
ORF1ab/nsp376G76CGgcTgc22B.1.4290.000047
ORF1ab/nsp376G76SGgcAgc22B.1.4290.000047
ORF1ab/nsp376G76SGgcAgc22B.1.4690.00722
ORF1ab/nsp376G76SGgcAgc22B.1.5260.000047
ORF1ab/nsp376G76GggCggT22B.1.5960.000174
ORF1ab/nsp376G76VgGcgTc22B.1.617.20.000008
ORF1ab/nsp376G76SGgcAgc22B.1.6230.001073
ORF1ab/nsp376G76CGgcTgc22C.370.000232
ORF1ab/nsp376G76GggCggT22D.20.00015
ORF1ab/nsp376G76CGgcTgc22D.20.00015
ORF1ab/nsp376G76delGGC---22N.60.014184
ORF1ab/nsp376G76delGGC---22P.10.000032
ORF1ab/nsp376G76GggCggT22P.1.120.000968
ORF1ab/nsp376G76SGgcAgc22P.20.000373
ORF1ab/nsp376G76CGgcTgc22P.20.000373
ORF1ab/nsp376G76CGgcTgc22Q.10.000253
ORF1ab/nsp376G76SGgcAgc22Q.80.00033
ORF1ab/nsp376G76SGgcAgc110.055556
ORF1ab/nsp376G76RGgCAgA110.055556
ORF1ab/nsp376G76GggCggA110.055556
ORF1ab/nsp376G76SGgcAgc11A0.000387
ORF1ab/nsp376G76CGgcTgc11A0.000387
ORF1ab/nsp376G76CGgcTgc11A.210.00277
ORF1ab/nsp376G76CGgcTgc11A.30.002096
ORF1ab/nsp376G76SGgcAgc11AY.100.00053
ORF1ab/nsp376G76del1GgC-gT11AY.1000.000046
ORF1ab/nsp376G76DgGcgAc11AY.1000.000046
ORF1ab/nsp376G76DgGcgAc11AY.1100.000113
ORF1ab/nsp376G76SGgcAgc11AY.1110.000183
ORF1ab/nsp376G76CGgcTgc11AY.1140.000231
ORF1ab/nsp376G76SGgcAgc11AY.1140.000231
ORF1ab/nsp376G76GggCggT11AY.1180.000063
ORF1ab/nsp376G76SGgcAgc11AY.1190.000035
ORF1ab/nsp376G76SGgcAgc11AY.1200.000037
ORF1ab/nsp376G76SGgcAgc11AY.1210.000135
ORF1ab/nsp376G76DgGcgAc11AY.140.000088
ORF1ab/nsp376G76SGgcAgc11AY.150.002222
ORF1ab/nsp376G76GggCggT11AY.200.000039
ORF1ab/nsp376G76DgGcgAc11AY.200.000039
ORF1ab/nsp376G76GggCggT11AY.230.00007
ORF1ab/nsp376G76CGgcTgc11AY.230.00007
ORF1ab/nsp376G76delGGC---11AY.250.000006
ORF1ab/nsp376G76VgGcgTc11AY.250.000006
ORF1ab/nsp376G76delGGC---11AY.260.000028
ORF1ab/nsp376G76SGgcAgc11AY.290.000016
ORF1ab/nsp376G76DgGcgAc11AY.290.000016
ORF1ab/nsp376G76GggCggT11AY.29.10.000221
ORF1ab/nsp376G76NGGcAAc11AY.30.00001
ORF1ab/nsp376G76WGgCTgG11AY.30.00001
ORF1ab/nsp376G76VgGcgTc11AY.30.00001
ORF1ab/nsp376G76GggCggT11AY.300.000396
ORF1ab/nsp376G76CGgcTgc11AY.300.000396
ORF1ab/nsp376G76SGgcAgc11AY.330.000067
ORF1ab/nsp376G76SGgcAgc11AY.340.000097
ORF1ab/nsp376G76GggCggT11AY.340.000097
ORF1ab/nsp376G76DgGcgAc11AY.360.000148
ORF1ab/nsp376G76DgGcgAc11AY.380.000499
ORF1ab/nsp376G76DgGcgAc11AY.39.10.00004
ORF1ab/nsp376G76GggCggT11AY.39.10.00004
ORF1ab/nsp376G76CGgcTgc11AY.4.20.000022
ORF1ab/nsp376G76GggCggT11AY.410.000294
ORF1ab/nsp376G76delGGC---11AY.420.00004
ORF1ab/nsp376G76DgGcgAc11AY.420.00004
ORF1ab/nsp376G76delGGC---11AY.430.000004
ORF1ab/nsp376G76WGgCTgG11AY.430.000004
ORF1ab/nsp376G76delGGC---11AY.440.000006
ORF1ab/nsp376G76VgGcgTc11AY.460.000104
ORF1ab/nsp376G76delGGC---11AY.460.000104
ORF1ab/nsp376G76SGgcAgc11AY.460.000104
ORF1ab/nsp376G76CGgcTgc11AY.46.10.001027
ORF1ab/nsp376G76SGgcAgc11AY.46.40.000165
ORF1ab/nsp376G76VgGcgTc11AY.46.60.000072
ORF1ab/nsp376G76SGgcAgc11AY.470.000031
ORF1ab/nsp376G76DgGcgAc11AY.50.000021
ORF1ab/nsp376G76CGgcTgc11AY.5.30.000337
ORF1ab/nsp376G76CGgcTgc11AY.520.000814
ORF1ab/nsp376G76GggCggT11AY.540.000095
ORF1ab/nsp376G76DgGcgAc11AY.540.000095
ORF1ab/nsp376G76DgGcgAc11AY.560.001605
ORF1ab/nsp376G76CGgcTgc11AY.580.000907
ORF1ab/nsp376G76CGgcTgc11AY.590.00053
ORF1ab/nsp376G76GggCggT11AY.610.000105
ORF1ab/nsp376G76DgGcgAc11AY.7.10.000113
ORF1ab/nsp376G76GggCggT11AY.710.000475
ORF1ab/nsp376G76SGgcAgc11AY.710.000475
ORF1ab/nsp376G76CGgcTgc11AY.730.000665
ORF1ab/nsp376G76CGgcTgc11AY.75.10.00018
ORF1ab/nsp376G76SGgcAgc11AY.75.10.00018
ORF1ab/nsp376G76SGgcAgc11AY.9.10.000084
ORF1ab/nsp376G76CGgcTgc11AY.910.00073
ORF1ab/nsp376G76GggCggT11AY.910.00073
ORF1ab/nsp376G76SGgcAgc11AY.910.00073
ORF1ab/nsp376G76GggCggT11AY.98.10.000048
ORF1ab/nsp376G76delGGC---11AY.990.001049
ORF1ab/nsp376G76SGgcAgc11AZ.20.000821
ORF1ab/nsp376G76delGGC---11AZ.20.000821
ORF1ab/nsp376G76DgGcgAc11B0.000128
ORF1ab/nsp376G76delGGC---11B.1.10.000018
ORF1ab/nsp376G76SGgcAgc11B.1.1.1380.006061
ORF1ab/nsp376G76SGgcAgc11B.1.1.1800.010753
ORF1ab/nsp376G76CGgcTgc11B.1.1.2140.000055
ORF1ab/nsp376G76SGgcAgc11B.1.1.2140.000055
ORF1ab/nsp376G76DgGcgAc11B.1.1.2220.000204
ORF1ab/nsp376G76CGgcTgc11B.1.1.2260.005814
ORF1ab/nsp376G76GggCggT11B.1.1.2320.001815
ORF1ab/nsp376G76GggCggT11B.1.1.2430.004082
ORF1ab/nsp376G76CGgcTgc11B.1.1.280.000311
ORF1ab/nsp376G76GggCggT11B.1.1.280.000311
ORF1ab/nsp376G76GggCggT11B.1.1.2940.001266
ORF1ab/nsp376G76GggCggT11B.1.1.3170.000412
ORF1ab/nsp376G76CGgcTgc11B.1.1.3170.000412
ORF1ab/nsp376G76DgGcgAc11B.1.1.3170.000412
ORF1ab/nsp376G76GggCggT11B.1.1.390.00051
ORF1ab/nsp376G76SGgcAgc11B.1.1.4200.001006
ORF1ab/nsp376G76GggCggT11B.1.1.4340.000349
ORF1ab/nsp376G76SGgcAgc11B.1.1.4340.000349
ORF1ab/nsp376G76SGgcAgc11B.1.1.500.000679
ORF1ab/nsp376G76CGgcTgc11B.1.1.5190.00004
ORF1ab/nsp376G76SGgcAgc11B.1.1.540.003021
ORF1ab/nsp376G76GggCggT11B.1.1.560.017857
ORF1ab/nsp376G76GggCggT11B.1.1.630.000386
ORF1ab/nsp376G76del1GgC-gT11B.1.1.70.000001
ORF1ab/nsp376G76AgGCgCT11B.1.1.70.000001
ORF1ab/nsp376G76CGgcTgc11B.1.1.700.000341
ORF1ab/nsp376G76CGgcTgc11B.1.110.30.000718
ORF1ab/nsp376G76SGgcAgc11B.1.1260.001276
ORF1ab/nsp376G76GggCggT11B.1.160.280.002924
ORF1ab/nsp376G76delGGC---11B.1.1770.000013
ORF1ab/nsp376G76CGgcTgc11B.1.1770.000013
ORF1ab/nsp376G76CGgcTgc11B.1.177.160.000664
ORF1ab/nsp376G76GggCggT11B.1.177.240.001295
ORF1ab/nsp376G76GggCggT11B.1.177.270.009434
ORF1ab/nsp376G76SGgcAgc11B.1.177.40.000211
ORF1ab/nsp376G76GggCggA11B.1.177.440.000519
ORF1ab/nsp376G76GggCggT11B.1.177.500.004695
ORF1ab/nsp376G76delGGC---11B.1.177.540.000606
ORF1ab/nsp376G76SGgcAgc11B.1.177.600.000218
ORF1ab/nsp376G76DgGcgAc11B.1.177.90.001332
ORF1ab/nsp376G76del1Ggc-gc11B.1.20.000009
ORF1ab/nsp376G76GggCggT11B.1.2210.000071
ORF1ab/nsp376G76GggCggT11B.1.2390.001221
ORF1ab/nsp376G76GggCggT11B.1.2400.000216
ORF1ab/nsp376G76VgGcgTc11B.1.2430.00007
ORF1ab/nsp376G76CGgcTgc11B.1.2580.000067
ORF1ab/nsp376G76SGgcAgc11B.1.2580.000067
ORF1ab/nsp376G76GggCggT11B.1.258.170.000104
ORF1ab/nsp376G76GggCggT11B.1.264.10.047619
ORF1ab/nsp376G76SGgcAgc11B.1.3330.010526
ORF1ab/nsp376G76CGgcTgc11B.1.3400.004292
ORF1ab/nsp376G76delGGC---11B.1.3490.000715
ORF1ab/nsp376G76GggCggT11B.1.351.50.0006
ORF1ab/nsp376G76SGgcAgc11B.1.360.000146
ORF1ab/nsp376G76GggCggT11B.1.3610.001289
ORF1ab/nsp376G76CGgcTgc11B.1.3610.001289
ORF1ab/nsp376G76CGgcTgc11B.1.3750.00082
ORF1ab/nsp376G76NGGCAAT11B.1.3770.004566
ORF1ab/nsp376G76CGgcTgc11B.1.390.003906
ORF1ab/nsp376G76GggCggT11B.1.3960.000706
ORF1ab/nsp376G76DgGcgAc11B.1.4000.000429
ORF1ab/nsp376G76SGgcAgc11B.1.4000.000429
ORF1ab/nsp376G76delGGC---11B.1.416.10.001563
ORF1ab/nsp376G76CGgcTgc11B.1.4270.00005
ORF1ab/nsp376G76VgGcgTc11B.1.4290.000024
ORF1ab/nsp376G76delGGC---11B.1.4290.000024
ORF1ab/nsp376G76GggCggT11B.1.438.10.000107
ORF1ab/nsp376G76DgGcgAc11B.1.4990.00105
ORF1ab/nsp376G76SGgcAgc11B.1.5070.011236
ORF1ab/nsp376G76CGgcTgc11B.1.5160.001957
ORF1ab/nsp376G76GggCggT11B.1.5240.001406
ORF1ab/nsp376G76DgGcgAc11B.1.5260.000024
ORF1ab/nsp376G76delGGC---11B.1.5610.000397
ORF1ab/nsp376G76DgGcgAc11B.1.5610.000397
ORF1ab/nsp376G76delGGC---11B.1.5770.000687
ORF1ab/nsp376G76DgGcgAc11B.1.5860.010989
ORF1ab/nsp376G76DgGcgAc11B.1.5870.001898
ORF1ab/nsp376G76SGgcAgc11B.1.5950.000261
ORF1ab/nsp376G76SGgcAgc11B.1.5960.000087
ORF1ab/nsp376G76SGgcAgc11B.1.6090.000479
ORF1ab/nsp376G76CGgcTgc11B.1.6100.003546
ORF1ab/nsp376G76AgGcgCc11B.1.617.20.000004
ORF1ab/nsp376G76del1GGC-CT11B.1.617.20.000004
ORF1ab/nsp376G76SGgcAgc11B.1.619.10.000641
ORF1ab/nsp376G76GggCggT11B.1.6210.000089
ORF1ab/nsp376G76SGgcAgc11B.1.621.10.000506
ORF1ab/nsp376G76CGgcTgc11B.1.621.10.000506
ORF1ab/nsp376G76GggCggA11B.310.003731
ORF1ab/nsp376G76delGGC---11C.170.055556
ORF1ab/nsp376G76VgGcgTc11D.20.000075
ORF1ab/nsp376G76GggCggT11P.1.10.000318
ORF1ab/nsp376G76VgGcgTc11P.1.10.000318
ORF1ab/nsp376G76SGgcAgc11P.1.140.000048
ORF1ab/nsp376G76GggCggT11P.1.150.000232
ORF1ab/nsp376G76CGgcTgc11P.1.150.000232
ORF1ab/nsp376G76CGgcTgc11P.1.70.000319
ORF1ab/nsp376G76CGgcTgc11P.50.013699
ORF1ab/nsp376G76GggCggA11Q.30.000145
ORF1ab/nsp376G76CGgcTgc11Q.50.016949
ORF1ab/nsp376G76GggCggT11Q.80.000165
ORF1ab/nsp376G76CGgcTgc11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.