CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 75 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp375L75LL893LsynctGctA20724171260.8263852942-2944

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp375L75LctGctA1712620724All0.003276
ORF1ab/nsp375L75LctGctA88348834AY.7.10.995605
ORF1ab/nsp375L75LctGctA50695074AY.70.993532
ORF1ab/nsp375L75LctGctA17691769AY.7.20.989374
ORF1ab/nsp375L75LctGctA31318AY.200.000117
ORF1ab/nsp375L75LctGctA475904B.1.1.70.000425
ORF1ab/nsp375L75LctGctA8226AY.1030.00005
ORF1ab/nsp375L75LctGctA99154B.1.617.20.000373
ORF1ab/nsp375L75LctGctA137146AY.420.005512
ORF1ab/nsp375L75LctGctA84115AY.40.000131
ORF1ab/nsp375L75LctGctA1495P.10.000221
ORF1ab/nsp375L75LctGctA7181AY.360.010523
ORF1ab/nsp375L75LctGctA7072B.1.5260.001645
ORF1ab/nsp375L75LctGctA2864AY.430.000124
ORF1ab/nsp375L75LctGctA843B.10.000073
ORF1ab/nsp375L75LctGctA3839AY.60.001563
ORF1ab/nsp375L75LctGctA1736B.1.20.00015
ORF1ab/nsp375L75LctGctA2434AY.440.000146
ORF1ab/nsp375L75LctGctA2933B.1.2210.00206
ORF1ab/nsp375L75LctGctA2729B.1.3510.000803
ORF1ab/nsp375L75LctGctA1128AY.30.000109
ORF1ab/nsp375L75LctGctA620B.1.1770.000079
ORF1ab/nsp375L75LctGctA1717AY.110.022758
ORF1ab/nsp375L75LctGctA1317AY.1210.001759
ORF1ab/nsp375L75LctGctA516B.1.4290.000118
ORF1ab/nsp375L75LctGctA1315AY.50.000268
ORF1ab/nsp375L75LctGctA914AY.250.000054
ORF1ab/nsp375L75LctGctA1414B.1.6370.001023
ORF1ab/nsp375L75LctGctA1313AY.1130.001851
ORF1ab/nsp375L75LctGctA1212AY.880.01061
ORF1ab/nsp375L75LctGctA1010AY.1060.003349
ORF1ab/nsp375L75LctGctA610AY.1110.001099
ORF1ab/nsp375L75LctGctA510B.1.1600.000156
ORF1ab/nsp375L75LctGctA1010B.1.30.026178
ORF1ab/nsp375L75LctGctA59AY.450.000608
ORF1ab/nsp375L75LctGctA89AY.840.0035
ORF1ab/nsp375L75LctGctA78AY.290.00011
ORF1ab/nsp375L75LctGctA28B.1.10.000036
ORF1ab/nsp375L75LctGctA28B.1.2340.000264
ORF1ab/nsp375L75LctGctA17AY.1020.000027
ORF1ab/nsp375L75LctGctA57AY.390.000124
ORF1ab/nsp375L75LctGctA67AY.750.000336
ORF1ab/nsp375L75LctGctA47AY.980.000316
ORF1ab/nsp375L75LctGctA27Q.80.00033
ORF1ab/nsp375L75LctGctA26AY.46.60.000144
ORF1ab/nsp375L75LctGctA66B.1.1.2160.005343
ORF1ab/nsp375L75LctGctA66P.1.70.001916
ORF1ab/nsp375L75LctGctA250.111111
ORF1ab/nsp375L75LctGctA25AY.1000.000092
ORF1ab/nsp375L75LctGctA25AY.1170.000169
ORF1ab/nsp375L75LctGctA45AY.230.000279
ORF1ab/nsp375L75LctGctA15AY.330.000067
ORF1ab/nsp375L75LctGctA55AY.4.30.004209
ORF1ab/nsp375L75LctGctA15B.1.1.2140.000055
ORF1ab/nsp375L75LctGctA44AY.1180.000251
ORF1ab/nsp375L75LctGctA14AY.260.000028
ORF1ab/nsp375L75LctGctA34AY.460.000312
ORF1ab/nsp375L75LctGctA44AY.5.30.00135
ORF1ab/nsp375L75LctGctA44AY.580.00363
ORF1ab/nsp375L75LctGctA24AY.640.00119
ORF1ab/nsp375L75LctGctA44B.1.5750.001214
ORF1ab/nsp375L75LctGctA24B.1.6210.000177
ORF1ab/nsp375L75LctGctA14C.360.000911
ORF1ab/nsp375L75LctGctA14C.370.000116
ORF1ab/nsp375L75LctGctA13AY.1190.000035
ORF1ab/nsp375L75LctGctA23AY.16.10.00094
ORF1ab/nsp375L75LctGctA23AY.470.000062
ORF1ab/nsp375L75LctGctA13AY.590.00053
ORF1ab/nsp375L75LctGctA33B.1.1.4340.001046
ORF1ab/nsp375L75LctGctA23B.1.2430.000139
ORF1ab/nsp375L75LctGctA33B.1.4990.003151
ORF1ab/nsp375L75LctGctA33B.300.044118
ORF1ab/nsp375L75LctGctA33P.1.170.000485
ORF1ab/nsp375L75LctGctA22A.250.036364
ORF1ab/nsp375L75LctGctA22AY.120.000632
ORF1ab/nsp375L75LctGctA22AY.3.10.000171
ORF1ab/nsp375L75LctGctA22AY.320.001065
ORF1ab/nsp375L75LctGctA22AY.380.000999
ORF1ab/nsp375L75LctGctA12AY.4.20.000022
ORF1ab/nsp375L75LctGctA22AY.480.00093
ORF1ab/nsp375L75LctGctA22AY.490.00639
ORF1ab/nsp375L75LctGctA22AY.510.001818
ORF1ab/nsp375L75LctGctA12AY.550.000917
ORF1ab/nsp375L75LctGctA22AY.560.00321
ORF1ab/nsp375L75LctGctA12AY.670.000464
ORF1ab/nsp375L75LctGctA22AY.920.000575
ORF1ab/nsp375L75LctGctA22AY.99.10.003106
ORF1ab/nsp375L75LctGctA12B.1.1.3780.007299
ORF1ab/nsp375L75LctGctA11A.2.50.000499
ORF1ab/nsp375L75LctGctA11AY.1100.000113
ORF1ab/nsp375L75LctGctA11AY.140.000088
ORF1ab/nsp375L75LctGctA11AY.160.00038
ORF1ab/nsp375L75LctGctA11AY.210.001898
ORF1ab/nsp375L75LctGctA11AY.400.000964
ORF1ab/nsp375L75LctGctA11AY.46.10.001027
ORF1ab/nsp375L75LctGctA11AY.540.000095
ORF1ab/nsp375L75LctGctA11AY.690.000187
ORF1ab/nsp375L75LctGctA11AY.730.000665
ORF1ab/nsp375L75LctGctA11AY.75.10.00018
ORF1ab/nsp375L75LctGctA11AY.860.00083
ORF1ab/nsp375L75LctGctA11AY.900.000684
ORF1ab/nsp375L75LctGctA11AY.950.000761
ORF1ab/nsp375L75LctGctA11AY.98.10.000048
ORF1ab/nsp375L75LctGctA11AY.990.001049
ORF1ab/nsp375L75LctGctA11B0.000128
ORF1ab/nsp375L75LctGctA11B.1.1.1760.000439
ORF1ab/nsp375L75LctGctA11B.1.1.1810.004545
ORF1ab/nsp375L75LctGctA11B.1.1.2880.001916
ORF1ab/nsp375L75LctGctA11B.1.1.3040.002809
ORF1ab/nsp375L75LctGctA11B.1.1.3260.001761
ORF1ab/nsp375L75LctGctA11B.1.1.3740.002375
ORF1ab/nsp375L75LctGctA11B.1.160.280.002924
ORF1ab/nsp375L75LctGctA11B.1.177.20.004545
ORF1ab/nsp375L75LctGctA11B.1.177.770.000726
ORF1ab/nsp375L75LctGctA11B.1.2060.000816
ORF1ab/nsp375L75LctGctA11B.1.3690.000285
ORF1ab/nsp375L75LctGctA11B.1.4160.001269
ORF1ab/nsp375L75LctGctA11B.1.596.10.009346
ORF1ab/nsp375L75LctGctA11B.1.6340.003425
ORF1ab/nsp375L75LctGctA11N.50.001767
ORF1ab/nsp375L75LctGctA11P.1.80.004785