CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 749

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3749T749IT1567InonsynaCtaTt15005150030.9998674964-4966
ORF1ab/nsp3749T749IT1567InonsynaCTaTC1500520.0001332894964-4966
ORF1ab/nsp3749T749AT1567AnonsynActGct990599030.9997984964-4966
ORF1ab/nsp3749T749AT1567AnonsynAcTGcC990510.0001009594964-4966
ORF1ab/nsp3749T749AT1567AnonsynAcTGcA990510.0001009594964-4966
ORF1ab/nsp3749T749TT1567TsynacTacC2732660.9743594964-4966
ORF1ab/nsp3749T749TT1567TsynacTacA27360.0219784964-4966
ORF1ab/nsp3749T749TT1567TsynacTacG27310.0036634964-4966
ORF1ab/nsp3749T749NT1567NnonsynaCtaAt78760.9743594964-4966
ORF1ab/nsp3749T749NT1567NnonsynaCTaAC7820.0256414964-4966
ORF1ab/nsp3749T749delT1567deldelACT---393914964-4966
ORF1ab/nsp3749T749VT1567VnonsynACtGTt272714964-4966
ORF1ab/nsp3749T749del1T1567del1delaCta-t15100.6666674964-4966
ORF1ab/nsp3749T749del1T1567del1delacTac-1540.2666674964-4966
ORF1ab/nsp3749T749del1T1567del1delACt-Tt1510.06666674964-4966
ORF1ab/nsp3749T749ST1567SnonsynActTct950.5555564964-4966
ORF1ab/nsp3749T749ST1567SnonsynAcTTcC920.2222224964-4966
ORF1ab/nsp3749T749ST1567SnonsynAcTTcA910.1111114964-4966
ORF1ab/nsp3749T749ST1567SnonsynaCtaGt910.1111114964-4966
ORF1ab/nsp3749T749DT1567DnonsynACTGAC530.64964-4966
ORF1ab/nsp3749T749DT1567DnonsynACtGAt520.44964-4966
ORF1ab/nsp3749T749YT1567YnonsynACtTAt430.754964-4966
ORF1ab/nsp3749T749YT1567YnonsynACTTAC410.254964-4966
ORF1ab/nsp3749T749FT1567FnonsynACTTTC210.54964-4966
ORF1ab/nsp3749T749FT1567FnonsynACtTTt210.54964-4966
ORF1ab/nsp3749T749XT1567XnonsynACTTAA1114964-4966
ORF1ab/nsp3749T749ET1567EnonsynACTGAA1114964-4966
ORF1ab/nsp3749T749KT1567KnonsynaCTaAA1114964-4966
ORF1ab/nsp3749T749del2T1567del2delaCTa--1114964-4966
ORF1ab/nsp3749T749PT1567PnonsynActCct1114964-4966
ORF1ab/nsp3749T749LT1567LnonsynACtCTt1114964-4966

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3749T749IaCtaTt1500315005All0.00287
ORF1ab/nsp3749T749IaCTaTC215005All0
ORF1ab/nsp3749T749AActGct99039905All0.001894
ORF1ab/nsp3749T749AAcTGcA19905All0
ORF1ab/nsp3749T749AAcTGcC19905All0
ORF1ab/nsp3749T749AActGct77267726B.1.1.70.006916
ORF1ab/nsp3749T749IaCtaTt74647464B.1.617.10.9626
ORF1ab/nsp3749T749IaCtaTt21112111B.1.1.70.00189
ORF1ab/nsp3749T749AActGct20732073Q.40.942701
ORF1ab/nsp3749T749IaCtaTt11211121B.1.3670.888273
ORF1ab/nsp3749T749IaCtaTt541541B.1.617.20.002037
ORF1ab/nsp3749T749IaCtaTt495495AY.30.004923
ORF1ab/nsp3749T749IaCtaTt415415B.1.6200.392621
ORF1ab/nsp3749T749IaCtaTt279279B.10.002556
ORF1ab/nsp3749T749IaCtaTt277277AY.40.000431
ORF1ab/nsp3749T749TacTacC266273All0.000051
ORF1ab/nsp3749T749TacTacA6273All0.000001
ORF1ab/nsp3749T749TacTacG1273All0
ORF1ab/nsp3749T749IaCtaTt165165AY.5.40.045656
ORF1ab/nsp3749T749IaCtaTt152152AY.430.000673
ORF1ab/nsp3749T749TacTacC130130AY.430.000576
ORF1ab/nsp3749T749IaCtaTt112112B.1.1.1330.949153
ORF1ab/nsp3749T749IaCtaTt109109AA.71
ORF1ab/nsp3749T749IaCtaTt9696B.1.2340.012667
ORF1ab/nsp3749T749IaCtaTt9090AY.1030.000559
ORF1ab/nsp3749T749IaCtaTt8585P.10.001339
ORF1ab/nsp3749T749IaCtaTt8181AY.250.000487
ORF1ab/nsp3749T749NaCtaAt7678All0.000015
ORF1ab/nsp3749T749NaCTaAC278All0
ORF1ab/nsp3749T749IaCtaTt7575B.1.20.00066
ORF1ab/nsp3749T749IaCtaTt7171B.1.1770.000935
ORF1ab/nsp3749T749TacTacC6868AY.4.20.001475
ORF1ab/nsp3749T749IaCtaTt5252AY.440.000317
ORF1ab/nsp3749T749IaCtaTt4646A.23.10.032394
ORF1ab/nsp3749T749IaCtaTt4141B.1.10.000744
ORF1ab/nsp3749T749AActGct4040Q.80.006596
ORF1ab/nsp3749T749delACT---3939All0.000007
ORF1ab/nsp3749T749IaCtaTt3535AY.99.20.003226
ORF1ab/nsp3749T749IaCtaTt3333AY.260.000934
ORF1ab/nsp3749T749IaCtaTt3232AY.1010.015694
ORF1ab/nsp3749T749AActGct2929B.1.10.000526
ORF1ab/nsp3749T749IaCtaTt2929B.1.1.10.009474
ORF1ab/nsp3749T749IaCtaTt2929B.1.1.3730.690476
ORF1ab/nsp3749T749IaCtaTt2828B.1.177.150.017666
ORF1ab/nsp3749T749VACtGTt2727All0.000005
ORF1ab/nsp3749T749VACtGTt2727B.1.1.70.000024
ORF1ab/nsp3749T749IaCtaTt2626AY.50.000537
ORF1ab/nsp3749T749TacTacC2324B.1.1.70.000021
ORF1ab/nsp3749T749TacTacA124B.1.1.70.000001
ORF1ab/nsp3749T749NaCtaAt2323B.1.1390.016862
ORF1ab/nsp3749T749IaCtaTt2121AY.750.001176
ORF1ab/nsp3749T749IaCtaTt2020AY.4.20.000434
ORF1ab/nsp3749T749IaCtaTt2020AY.420.000805
ORF1ab/nsp3749T749IaCtaTt2020AY.98.10.000969
ORF1ab/nsp3749T749IaCtaTt1919AY.290.0003
ORF1ab/nsp3749T749IaCtaTt1919B0.002428
ORF1ab/nsp3749T749delACT---1919B.1.1.70.000017
ORF1ab/nsp3749T749IaCtaTt1717AY.330.001135
ORF1ab/nsp3749T749del1aCta-t1015All0.000002
ORF1ab/nsp3749T749del1acTac-415All0.000001
ORF1ab/nsp3749T749del1ACt-Tt115All0
ORF1ab/nsp3749T749IaCtaTt1515B.1.1.3330.016146
ORF1ab/nsp3749T749IaCtaTt1515B.1.177.690.022255
ORF1ab/nsp3749T749IaCtaTt1515B.1.2430.001044
ORF1ab/nsp3749T749IaCtaTt1414AY.46.30.013072
ORF1ab/nsp3749T749IaCtaTt1414B.1.2580.000932
ORF1ab/nsp3749T749IaCtaTt1414B.1.4290.000329
ORF1ab/nsp3749T749IaCtaTt1414B.1.5260.000329
ORF1ab/nsp3749T749IaCtaTt1313AY.1180.000814
ORF1ab/nsp3749T749IaCtaTt1313AY.3.10.001108
ORF1ab/nsp3749T749IaCtaTt1313AY.390.000321
ORF1ab/nsp3749T749IaCtaTt1313AY.9.20.000477
ORF1ab/nsp3749T749IaCtaTt1313B.1.177.340.684211
ORF1ab/nsp3749T749IaCtaTt1313B.1.4270.000656
ORF1ab/nsp3749T749IaCtaTt1212AY.240.005172
ORF1ab/nsp3749T749IaCtaTt1212B.1.3690.003423
ORF1ab/nsp3749T749IaCtaTt1212B.1.5250.001358
ORF1ab/nsp3749T749IaCtaTt1111AY.39.10.000436
ORF1ab/nsp3749T749IaCtaTt1111AY.4.50.001182
ORF1ab/nsp3749T749NaCtaAt1111B.1.1.70.00001
ORF1ab/nsp3749T749IaCtaTt1111P.1.140.000526
ORF1ab/nsp3749T749IaCtaTt1010AY.740.001156
ORF1ab/nsp3749T749IaCtaTt1010B.1.1.3190.175439
ORF1ab/nsp3749T749IaCtaTt1010B.1.1950.050251
ORF1ab/nsp3749T749SActTct59All0.000001
ORF1ab/nsp3749T749SAcTTcC29All0
ORF1ab/nsp3749T749SaCtaGt19All0
ORF1ab/nsp3749T749SAcTTcA19All0
ORF1ab/nsp3749T749IaCtaTt99B.1.1.4340.003137
ORF1ab/nsp3749T749IaCtaTt99P.1.20.010405
ORF1ab/nsp3749T749IaCtaTt88AY.1200.000297
ORF1ab/nsp3749T749IaCtaTt88AY.200.000311
ORF1ab/nsp3749T749TacTacC78AY.40.000011
ORF1ab/nsp3749T749TacTacG18AY.40.000002
ORF1ab/nsp3749T749IaCtaTt88B.1.1.280.00249
ORF1ab/nsp3749T749IaCtaTt88B.1.1600.00025
ORF1ab/nsp3749T749IaCtaTt88B.1.177.730.00453
ORF1ab/nsp3749T749NaCtaAt88B.1.360.001167
ORF1ab/nsp3749T749IaCtaTt88B.1.5680.008889
ORF1ab/nsp3749T749IaCtaTt77AY.1170.000592
ORF1ab/nsp3749T749IaCtaTt77AY.1190.000247
ORF1ab/nsp3749T749IaCtaTt77AY.140.000616
ORF1ab/nsp3749T749IaCtaTt77AY.230.000488
ORF1ab/nsp3749T749IaCtaTt77AY.450.000852
ORF1ab/nsp3749T749IaCtaTt77AY.9.10.000586
ORF1ab/nsp3749T749IaCtaTt77B.1.1.2530.017544
ORF1ab/nsp3749T749IaCtaTt77B.1.1.330.002946
ORF1ab/nsp3749T749IaCtaTt77B.1.1.5190.000278
ORF1ab/nsp3749T749IaCtaTt77B.1.5640.002981
ORF1ab/nsp3749T749del1aCta-t77B.1.617.10.000903
ORF1ab/nsp3749T749IaCtaTt77D.20.000525
ORF1ab/nsp3749T749IaCtaTt66A.70.333333
ORF1ab/nsp3749T749IaCtaTt66AY.1040.011905
ORF1ab/nsp3749T749IaCtaTt66AZ.20.004926
ORF1ab/nsp3749T749IaCtaTt66B.1.1.2840.000644
ORF1ab/nsp3749T749IaCtaTt66B.1.1260.007653
ORF1ab/nsp3749T749IaCtaTt66B.1.2140.021978
ORF1ab/nsp3749T749IaCtaTt66B.1.438.10.000644
ORF1ab/nsp3749T749NaCtaAt66B.1.5250.000679
ORF1ab/nsp3749T749IaCtaTt66B.1.6210.000531
ORF1ab/nsp3749T749IaCtaTt66Q.20.003681
ORF1ab/nsp3749T749TacTacA350.166667
ORF1ab/nsp3749T749TacTacC250.111111
ORF1ab/nsp3749T749DACTGAC35All0.000001
ORF1ab/nsp3749T749DACtGAt25All0
ORF1ab/nsp3749T749IaCtaTt55AY.120.00158
ORF1ab/nsp3749T749IaCtaTt55AY.340.000485
ORF1ab/nsp3749T749AActGct55AY.40.000008
ORF1ab/nsp3749T749IaCtaTt55AY.46.60.000361
ORF1ab/nsp3749T749IaCtaTt55AY.540.000477
ORF1ab/nsp3749T749IaCtaTt55AY.60.000206
ORF1ab/nsp3749T749IaCtaTt55B.1.1.5280.024038
ORF1ab/nsp3749T749IaCtaTt55B.1.1.630.001929
ORF1ab/nsp3749T749IaCtaTt55B.1.2210.000355
ORF1ab/nsp3749T749IaCtaTt55B.1.5960.000436
ORF1ab/nsp3749T749IaCtaTt55B.1.6280.001762
ORF1ab/nsp3749T749IaCtaTt55N.50.008834
ORF1ab/nsp3749T749IaCtaTt55P.1.10.001588
ORF1ab/nsp3749T749IaCtaTt55Q.10.000632
ORF1ab/nsp3749T749SActTct240.111111
ORF1ab/nsp3749T749SAcTTcC140.055556
ORF1ab/nsp3749T749SAcTTcA140.055556
ORF1ab/nsp3749T749IaCtaTt44A.210.01108
ORF1ab/nsp3749T749YACtTAt34All0.000001
ORF1ab/nsp3749T749YACTTAC14All0
ORF1ab/nsp3749T749IaCtaTt44AY.1080.00441
ORF1ab/nsp3749T749TacTacC44AY.420.000161
ORF1ab/nsp3749T749IaCtaTt44B.1.1.2140.000222
ORF1ab/nsp3749T749IaCtaTt44B.1.1.2160.003562
ORF1ab/nsp3749T749IaCtaTt44B.1.1.250.002274
ORF1ab/nsp3749T749IaCtaTt44B.1.1.390.002039
ORF1ab/nsp3749T749TacTacC44B.1.1.5190.000159
ORF1ab/nsp3749T749IaCtaTt44B.1.160.160.003717
ORF1ab/nsp3749T749IaCtaTt44B.1.177.600.000874
ORF1ab/nsp3749T749IaCtaTt44B.1.258.170.000416
ORF1ab/nsp3749T749IaCtaTt44B.1.4250.011976
ORF1ab/nsp3749T749IaCtaTt44C.370.000464
ORF1ab/nsp3749T749IaCtaTt44P.1.70.001277
ORF1ab/nsp3749T749YACtTAt230.111111
ORF1ab/nsp3749T749NaCtaAt230.111111
ORF1ab/nsp3749T749DACTGAC230.111111
ORF1ab/nsp3749T749YACTTAC130.055556
ORF1ab/nsp3749T749NaCTaAC130.055556
ORF1ab/nsp3749T749DACtGAt130.055556
ORF1ab/nsp3749T749TacTacC33AY.250.000018
ORF1ab/nsp3749T749IaCtaTt33AY.4.40.001227
ORF1ab/nsp3749T749AActGct33AY.440.000018
ORF1ab/nsp3749T749IaCtaTt33AY.460.000312
ORF1ab/nsp3749T749IaCtaTt33AY.46.20.001906
ORF1ab/nsp3749T749IaCtaTt33AY.470.000093
ORF1ab/nsp3749T749IaCtaTt33AY.90.000203
ORF1ab/nsp3749T749IaCtaTt33AY.980.000237
ORF1ab/nsp3749T749IaCtaTt33B.1.1.1350.014085
ORF1ab/nsp3749T749NaCtaAt33B.1.1770.00004
ORF1ab/nsp3749T749IaCtaTt33B.1.177.620.003576
ORF1ab/nsp3749T749IaCtaTt33B.1.177.810.000568
ORF1ab/nsp3749T749NaCtaAt23B.1.2210.000142
ORF1ab/nsp3749T749NaCTaAC13B.1.2210.000071
ORF1ab/nsp3749T749IaCtaTt33B.1.3510.000089
ORF1ab/nsp3749T749TacTacC33B.1.4290.000071
ORF1ab/nsp3749T749IaCtaTt33B.1.5610.001191
ORF1ab/nsp3749T749IaCtaTt33B.1.5750.00091
ORF1ab/nsp3749T749IaCtaTt33B.1.5760.00272
ORF1ab/nsp3749T749AActGct33B.1.617.20.000011
ORF1ab/nsp3749T749IaCtaTt33B.1.621.10.001517
ORF1ab/nsp3749T749IaCtaTt33C.300.005181
ORF1ab/nsp3749T749IaCtaTt33P.1.150.000697
ORF1ab/nsp3749T749FACtTTt120.055556
ORF1ab/nsp3749T749IaCtaTt120.055556
ORF1ab/nsp3749T749AActGct120.055556
ORF1ab/nsp3749T749AAcTGcA120.055556
ORF1ab/nsp3749T749IaCTaTC120.055556
ORF1ab/nsp3749T749FACTTTC120.055556
ORF1ab/nsp3749T749FACTTTC12All0
ORF1ab/nsp3749T749FACtTTt12All0
ORF1ab/nsp3749T749IaCtaTt22AY.1000.000092
ORF1ab/nsp3749T749AActGct22AY.1020.000053
ORF1ab/nsp3749T749IaCtaTt22AY.1020.000053
ORF1ab/nsp3749T749IaCtaTt22AY.1060.00067
ORF1ab/nsp3749T749IaCtaTt22AY.1130.000285
ORF1ab/nsp3749T749TacTacC22AY.200.000078
ORF1ab/nsp3749T749NaCtaAt22AY.40.000003
ORF1ab/nsp3749T749TacTacC22AY.440.000012
ORF1ab/nsp3749T749del1acTac-12AY.440.000006
ORF1ab/nsp3749T749del1aCta-t12AY.440.000006
ORF1ab/nsp3749T749NaCtaAt22AY.50.000041
ORF1ab/nsp3749T749IaCtaTt22AY.630.000774
ORF1ab/nsp3749T749IaCtaTt22AY.650.001066
ORF1ab/nsp3749T749IaCtaTt22AY.680.000547
ORF1ab/nsp3749T749IaCtaTt22AY.75.10.000361
ORF1ab/nsp3749T749AActGct22B.10.000018
ORF1ab/nsp3749T749NaCtaAt22B.10.000018
ORF1ab/nsp3749T749del1aCta-t12B.10.000009
ORF1ab/nsp3749T749del1acTac-12B.10.000009
ORF1ab/nsp3749T749TacTacA12B.1.10.000018
ORF1ab/nsp3749T749TacTacC12B.1.10.000018
ORF1ab/nsp3749T749IaCtaTt22B.1.1.2220.000408
ORF1ab/nsp3749T749IaCtaTt22B.1.1.2940.002532
ORF1ab/nsp3749T749IaCtaTt22B.1.1.3510.005587
ORF1ab/nsp3749T749IaCtaTt22B.1.1.3980.006452
ORF1ab/nsp3749T749delACT---22B.1.1770.000026
ORF1ab/nsp3749T749IaCtaTt22B.1.177.210.000153
ORF1ab/nsp3749T749IaCtaTt22B.1.177.360.032258
ORF1ab/nsp3749T749IaCtaTt22B.1.177.70.00033
ORF1ab/nsp3749T749IaCtaTt22B.1.177.80.001505
ORF1ab/nsp3749T749TacTacC22B.1.20.000018
ORF1ab/nsp3749T749DACtGAt12B.1.2210.000071
ORF1ab/nsp3749T749AActGct12B.1.2210.000071
ORF1ab/nsp3749T749DACTGAC12B.1.2210.000071
ORF1ab/nsp3749T749AAcTGcC12B.1.2210.000071
ORF1ab/nsp3749T749IaCtaTt22B.1.2370.00995
ORF1ab/nsp3749T749IaCtaTt22B.1.3490.00143
ORF1ab/nsp3749T749delACT---22B.1.360.000292
ORF1ab/nsp3749T749IaCtaTt22B.1.360.000292
ORF1ab/nsp3749T749IaCtaTt22B.1.36.290.001035
ORF1ab/nsp3749T749IaCtaTt22B.1.3620.003082
ORF1ab/nsp3749T749IaCtaTt22B.1.4700.002809
ORF1ab/nsp3749T749IaCtaTt22B.1.5170.000854
ORF1ab/nsp3749T749TacTacC22B.1.5260.000047
ORF1ab/nsp3749T749IaCtaTt22B.1.5820.000981
ORF1ab/nsp3749T749IaCtaTt22B.1.5880.00182
ORF1ab/nsp3749T749IaCtaTt22C.350.001548
ORF1ab/nsp3749T749IaCtaTt22C.36.30.001134
ORF1ab/nsp3749T749IaCtaTt22P.1.170.000324
ORF1ab/nsp3749T749EACTGAA110.055556
ORF1ab/nsp3749T749XACTTAA110.055556
ORF1ab/nsp3749T749KaCTaAA110.055556
ORF1ab/nsp3749T749delACT---11A0.000387
ORF1ab/nsp3749T749IaCtaTt11A0.000387
ORF1ab/nsp3749T749delACT---11A.2.20.001689
ORF1ab/nsp3749T749IaCtaTt11A.2.20.001689
ORF1ab/nsp3749T749IaCtaTt11A.280.002646
ORF1ab/nsp3749T749IaCtaTt11A.30.002096
ORF1ab/nsp3749T749IaCtaTt11A.50.001923
ORF1ab/nsp3749T749KaCTaAA11All0
ORF1ab/nsp3749T749PActCct11All0
ORF1ab/nsp3749T749LACtCTt11All0
ORF1ab/nsp3749T749del2aCTa--11All0
ORF1ab/nsp3749T749XACTTAA11All0
ORF1ab/nsp3749T749EACTGAA11All0
ORF1ab/nsp3749T749del1acTac-11AU.30.00211
ORF1ab/nsp3749T749AActGct11AY.1000.000046
ORF1ab/nsp3749T749NaCtaAt11AY.1000.000046
ORF1ab/nsp3749T749AActGct11AY.1050.000643
ORF1ab/nsp3749T749TacTacC11AY.1060.000335
ORF1ab/nsp3749T749IaCtaTt11AY.1140.000231
ORF1ab/nsp3749T749IaCtaTt11AY.116.10.000311
ORF1ab/nsp3749T749AActGct11AY.1170.000085
ORF1ab/nsp3749T749TacTacC11AY.1200.000037
ORF1ab/nsp3749T749IaCtaTt11AY.130.000161
ORF1ab/nsp3749T749IaCtaTt11AY.16.10.00047
ORF1ab/nsp3749T749TacTacC11AY.290.000016
ORF1ab/nsp3749T749NaCtaAt11AY.29.10.000221
ORF1ab/nsp3749T749IaCtaTt11AY.29.10.000221
ORF1ab/nsp3749T749del1ACt-Tt11AY.30.00001
ORF1ab/nsp3749T749IaCtaTt11AY.320.000532
ORF1ab/nsp3749T749AActGct11AY.330.000067
ORF1ab/nsp3749T749IaCtaTt11AY.360.000148
ORF1ab/nsp3749T749IaCtaTt11AY.370.000316
ORF1ab/nsp3749T749delACT---11AY.40.000002
ORF1ab/nsp3749T749PActCct11AY.40.000002
ORF1ab/nsp3749T749del2aCTa--11AY.40.000002
ORF1ab/nsp3749T749SaCtaGt11AY.440.000006
ORF1ab/nsp3749T749NaCtaAt11AY.460.000104
ORF1ab/nsp3749T749TacTacC11AY.46.40.000165
ORF1ab/nsp3749T749IaCtaTt11AY.490.003195
ORF1ab/nsp3749T749NaCtaAt11AY.5.30.000337
ORF1ab/nsp3749T749IaCtaTt11AY.550.000917
ORF1ab/nsp3749T749IaCtaTt11AY.590.00053
ORF1ab/nsp3749T749NaCtaAt11AY.620.000436
ORF1ab/nsp3749T749IaCTaTC11AY.670.000464
ORF1ab/nsp3749T749AActGct11AY.680.000274
ORF1ab/nsp3749T749IaCtaTt11AY.7.10.000113
ORF1ab/nsp3749T749IaCtaTt11AY.790.001211
ORF1ab/nsp3749T749IaCtaTt11AY.820.001357
ORF1ab/nsp3749T749IaCtaTt11AY.840.000437
ORF1ab/nsp3749T749IaCtaTt11AY.880.000884
ORF1ab/nsp3749T749TacTacC11AY.90.000068
ORF1ab/nsp3749T749TacTacC11AY.9.20.000037
ORF1ab/nsp3749T749AActGct11B0.000128
ORF1ab/nsp3749T749SActTct11B.10.000009
ORF1ab/nsp3749T749SActTct11B.1.10.000018
ORF1ab/nsp3749T749NaCtaAt11B.1.10.000018
ORF1ab/nsp3749T749IaCtaTt11B.1.1.1170.009709
ORF1ab/nsp3749T749delACT---11B.1.1.1390.022727
ORF1ab/nsp3749T749delACT---11B.1.1.1420.017544
ORF1ab/nsp3749T749IaCtaTt11B.1.1.1860.003436
ORF1ab/nsp3749T749IaCtaTt11B.1.1.2040.00304
ORF1ab/nsp3749T749IaCtaTt11B.1.1.2200.001859
ORF1ab/nsp3749T749AActGct11B.1.1.2280.003049
ORF1ab/nsp3749T749IaCtaTt11B.1.1.2770.000759
ORF1ab/nsp3749T749IaCtaTt11B.1.1.2910.000742
ORF1ab/nsp3749T749IaCtaTt11B.1.1.30.008696
ORF1ab/nsp3749T749IaCtaTt11B.1.1.3060.000438
ORF1ab/nsp3749T749IaCtaTt11B.1.1.3170.000412
ORF1ab/nsp3749T749IaCtaTt11B.1.1.3380.017241
ORF1ab/nsp3749T749IaCtaTt11B.1.1.3540.004386
ORF1ab/nsp3749T749TacTacC11B.1.1.3620.005618
ORF1ab/nsp3749T749IaCtaTt11B.1.1.3690.000446
ORF1ab/nsp3749T749IaCtaTt11B.1.1.3910.008547
ORF1ab/nsp3749T749AActGct11B.1.1.4090.002833
ORF1ab/nsp3749T749IaCtaTt11B.1.1.4320.001266
ORF1ab/nsp3749T749IaCtaTt11B.1.1.4330.001425
ORF1ab/nsp3749T749IaCtaTt11B.1.1.4420.018519
ORF1ab/nsp3749T749IaCtaTt11B.1.1.4860.001577
ORF1ab/nsp3749T749SAcTTcC11B.1.1.70.000001
ORF1ab/nsp3749T749IaCtaTt11B.1.1.700.000341
ORF1ab/nsp3749T749IaCtaTt11B.1.1280.000635
ORF1ab/nsp3749T749TacTacC11B.1.1420.002899
ORF1ab/nsp3749T749delACT---11B.1.1570.002985
ORF1ab/nsp3749T749IaCtaTt11B.1.1570.002985
ORF1ab/nsp3749T749delACT---11B.1.1600.000031
ORF1ab/nsp3749T749IaCtaTt11B.1.160.320.004292
ORF1ab/nsp3749T749IaCtaTt11B.1.1620.005025
ORF1ab/nsp3749T749AActGct11B.1.1700.00431
ORF1ab/nsp3749T749NaCtaAt11B.1.177.100.000878
ORF1ab/nsp3749T749IaCtaTt11B.1.177.100.000878
ORF1ab/nsp3749T749IaCtaTt11B.1.177.120.000152
ORF1ab/nsp3749T749IaCtaTt11B.1.177.170.000821
ORF1ab/nsp3749T749IaCtaTt11B.1.177.330.001645
ORF1ab/nsp3749T749delACT---11B.1.177.540.000606
ORF1ab/nsp3749T749IaCtaTt11B.1.177.540.000606
ORF1ab/nsp3749T749IaCtaTt11B.1.177.60.000977
ORF1ab/nsp3749T749delACT---11B.1.177.630.002703
ORF1ab/nsp3749T749IaCtaTt11B.1.177.630.002703
ORF1ab/nsp3749T749IaCtaTt11B.1.177.650.000665
ORF1ab/nsp3749T749IaCtaTt11B.1.177.750.001041
ORF1ab/nsp3749T749IaCtaTt11B.1.177.820.000477
ORF1ab/nsp3749T749IaCtaTt11B.1.177.830.001481
ORF1ab/nsp3749T749NaCtaAt11B.1.177.860.000183
ORF1ab/nsp3749T749IaCtaTt11B.1.177.860.000183
ORF1ab/nsp3749T749AActGct11B.1.20.000009
ORF1ab/nsp3749T749YACtTAt11B.1.20.000009
ORF1ab/nsp3749T749del1acTac-11B.1.20.000009
ORF1ab/nsp3749T749IaCtaTt11B.1.2060.000816
ORF1ab/nsp3749T749del1aCta-t11B.1.2140.003663
ORF1ab/nsp3749T749TacTacC11B.1.2210.000071
ORF1ab/nsp3749T749IaCtaTt11B.1.221.20.004016
ORF1ab/nsp3749T749IaCtaTt11B.1.230.006061
ORF1ab/nsp3749T749NaCtaAt11B.1.2340.000132
ORF1ab/nsp3749T749IaCtaTt11B.1.30.002618
ORF1ab/nsp3749T749delACT---11B.1.3190.003049
ORF1ab/nsp3749T749IaCtaTt11B.1.3200.001245
ORF1ab/nsp3749T749IaCtaTt11B.1.3480.018182
ORF1ab/nsp3749T749IaCtaTt11B.1.36.100.004785
ORF1ab/nsp3749T749IaCtaTt11B.1.36.380.001642
ORF1ab/nsp3749T749IaCtaTt11B.1.3610.001289
ORF1ab/nsp3749T749NaCtaAt11B.1.3780.006849
ORF1ab/nsp3749T749IaCtaTt11B.1.390.003906
ORF1ab/nsp3749T749TacTacC11B.1.4040.001302
ORF1ab/nsp3749T749delACT---11B.1.4090.000781
ORF1ab/nsp3749T749delACT---11B.1.4150.014286
ORF1ab/nsp3749T749IaCtaTt11B.1.4560.003268
ORF1ab/nsp3749T749IaCtaTt11B.1.466.20.000391
ORF1ab/nsp3749T749IaCtaTt11B.1.4780.011765
ORF1ab/nsp3749T749AActGct11B.1.4970.000315
ORF1ab/nsp3749T749IaCtaTt11B.1.5090.000866
ORF1ab/nsp3749T749IaCtaTt11B.1.5240.001406
ORF1ab/nsp3749T749IaCtaTt11B.1.5370.02
ORF1ab/nsp3749T749NaCtaAt11B.1.5410.004425
ORF1ab/nsp3749T749TacTacC11B.1.5410.004425
ORF1ab/nsp3749T749AActGct11B.1.5760.000907
ORF1ab/nsp3749T749IaCtaTt11B.1.5970.00463
ORF1ab/nsp3749T749delACT---11B.1.617.10.000129
ORF1ab/nsp3749T749AActGct11B.1.617.10.000129
ORF1ab/nsp3749T749delACT---11B.1.617.20.000004
ORF1ab/nsp3749T749LACtCTt11B.1.6200.000946
ORF1ab/nsp3749T749TacTacC11B.1.6210.000089
ORF1ab/nsp3749T749NaCtaAt11B.1.6210.000089
ORF1ab/nsp3749T749AActGct11B.1.6230.000536
ORF1ab/nsp3749T749IaCtaTt11B.1.6230.000536
ORF1ab/nsp3749T749NaCtaAt11B.1.6360.006711
ORF1ab/nsp3749T749IaCtaTt11B.1.6370.000073
ORF1ab/nsp3749T749delACT---11B.150.017544
ORF1ab/nsp3749T749IaCtaTt11B.3.10.001658
ORF1ab/nsp3749T749AActGct11B.3.10.001658
ORF1ab/nsp3749T749TacTacA11B.400.000364
ORF1ab/nsp3749T749IaCtaTt11B.550.00295
ORF1ab/nsp3749T749IaCtaTt11B.60.00091
ORF1ab/nsp3749T749IaCtaTt11B.6.80.008264
ORF1ab/nsp3749T749IaCtaTt11C.10.002392
ORF1ab/nsp3749T749IaCtaTt11C.36.10.004149
ORF1ab/nsp3749T749AActGct11C.370.000116
ORF1ab/nsp3749T749SActTct11D.20.000075
ORF1ab/nsp3749T749TacTacC11D.20.000075
ORF1ab/nsp3749T749NaCtaAt11P.10.000016
ORF1ab/nsp3749T749AActGct11P.10.000016
ORF1ab/nsp3749T749delACT---11P.10.000016
ORF1ab/nsp3749T749IaCtaTt11P.1.120.000484
ORF1ab/nsp3749T749IaCtaTt11P.1.130.000898
ORF1ab/nsp3749T749NaCtaAt11P.20.000187
ORF1ab/nsp3749T749IaCtaTt11P.20.000187
ORF1ab/nsp3749T749AActGct11Q.10.000126
ORF1ab/nsp3749T749IaCtaTt11Q.80.000165