CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 74 & Codon = cTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp374P74LP892LnonsyncCacTa8057980.9913042939-2941

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp374P74LcCacTa798805All0.000153
ORF1ab/nsp374P74LcCacTa176176B.1.2011
ORF1ab/nsp374P74LcCacTa104104B.1.1.70.000093
ORF1ab/nsp374P74LcCacTa4848B.1.617.20.000181
ORF1ab/nsp374P74LcCacTa3939AY.420.001569
ORF1ab/nsp374P74LcCacTa3334AY.40.000051
ORF1ab/nsp374P74LcCacTa3030B.10.000275
ORF1ab/nsp374P74LcCacTa2727AY.1000.001242
ORF1ab/nsp374P74LcCacTa2727C.370.003134
ORF1ab/nsp374P74LcCacTa2323B.1.1.330.00968
ORF1ab/nsp374P74LcCacTa1616AY.1030.000099
ORF1ab/nsp374P74LcCacTa1515B.1.20.000132
ORF1ab/nsp374P74LcCacTa1414AY.30.000139
ORF1ab/nsp374P74LcCacTa1414AY.440.000085
ORF1ab/nsp374P74LcCacTa1313AY.60.000535
ORF1ab/nsp374P74LcCacTa1313B.1.36.160.018519
ORF1ab/nsp374P74LcCacTa1111B.400.004007
ORF1ab/nsp374P74LcCacTa1010Z.10.028902
ORF1ab/nsp374P74LcCacTa68AY.430.000027
ORF1ab/nsp374P74LcCacTa88B.1.5260.000188
ORF1ab/nsp374P74LcCacTa77AY.250.000042
ORF1ab/nsp374P74LcCacTa77AY.4.20.000152
ORF1ab/nsp374P74LcCacTa77B.1.1.2220.001428
ORF1ab/nsp374P74LcCacTa66AY.260.00017
ORF1ab/nsp374P74LcCacTa66B.1.160.160.005576
ORF1ab/nsp374P74LcCacTa55AY.1190.000177
ORF1ab/nsp374P74LcCacTa55AY.220.01046
ORF1ab/nsp374P74LcCacTa55AY.230.000349
ORF1ab/nsp374P74LcCacTa55B.1.10.000091
ORF1ab/nsp374P74LcCacTa55B.1.1770.000066
ORF1ab/nsp374P74LcCacTa55B.1.617.10.000645
ORF1ab/nsp374P74LcCacTa55P.10.000079
ORF1ab/nsp374P74LcCacTa44AY.120.10.001284
ORF1ab/nsp374P74LcCacTa44B.1.3510.000119
ORF1ab/nsp374P74LcCacTa33AY.140.000264
ORF1ab/nsp374P74LcCacTa33AY.270.000194
ORF1ab/nsp374P74LcCacTa33AY.390.000074
ORF1ab/nsp374P74LcCacTa33AY.740.000347
ORF1ab/nsp374P74LcCacTa33AY.840.001312
ORF1ab/nsp374P74LcCacTa33AY.90.000203
ORF1ab/nsp374P74LcCacTa33B.1.1.630.001157
ORF1ab/nsp374P74LcCacTa33B.1.466.20.001174
ORF1ab/nsp374P74LcCacTa33B.1.4700.004213
ORF1ab/nsp374P74LcCacTa22AM.40.007143
ORF1ab/nsp374P74LcCacTa22AY.10.000791
ORF1ab/nsp374P74LcCacTa22AY.160.000759
ORF1ab/nsp374P74LcCacTa22AY.340.000194
ORF1ab/nsp374P74LcCacTa22AY.460.000208
ORF1ab/nsp374P74LcCacTa12AY.670.000464
ORF1ab/nsp374P74LcCacTa22AY.710.00095
ORF1ab/nsp374P74LcCacTa22AY.750.000112
ORF1ab/nsp374P74LcCacTa22AY.9.10.000167
ORF1ab/nsp374P74LcCacTa22AY.99.20.000184
ORF1ab/nsp374P74LcCacTa22B.1.1.2840.000215
ORF1ab/nsp374P74LcCacTa22B.1.1.2940.002532
ORF1ab/nsp374P74LcCacTa22B.1.1600.000062
ORF1ab/nsp374P74LcCacTa22B.1.2580.000133
ORF1ab/nsp374P74LcCacTa22B.1.4270.000101
ORF1ab/nsp374P74LcCacTa22B.1.4290.000047
ORF1ab/nsp374P74LcCacTa11A.20.000662
ORF1ab/nsp374P74LcCacTa11AE.80.000489
ORF1ab/nsp374P74LcCacTa11AY.1060.000335
ORF1ab/nsp374P74LcCacTa11AY.130.000161
ORF1ab/nsp374P74LcCacTa11AY.200.000039
ORF1ab/nsp374P74LcCacTa11AY.240.000431
ORF1ab/nsp374P74LcCacTa11AY.290.000016
ORF1ab/nsp374P74LcCacTa11AY.3.10.000085
ORF1ab/nsp374P74LcCacTa11AY.380.000499
ORF1ab/nsp374P74LcCacTa11AY.4.50.000107
ORF1ab/nsp374P74LcCacTa11AY.46.60.000072
ORF1ab/nsp374P74LcCacTa11AY.470.000031
ORF1ab/nsp374P74LcCacTa11AY.50.000021
ORF1ab/nsp374P74LcCacTa11AY.540.000095
ORF1ab/nsp374P74LcCacTa11AY.600.000938
ORF1ab/nsp374P74LcCacTa11AY.650.000533
ORF1ab/nsp374P74LcCacTa11AY.7.10.000113
ORF1ab/nsp374P74LcCacTa11AY.9.20.000037
ORF1ab/nsp374P74LcCacTa11AY.980.000079
ORF1ab/nsp374P74LcCacTa11B.1.1.10.000327
ORF1ab/nsp374P74LcCacTa11B.1.1.1110.014706
ORF1ab/nsp374P74LcCacTa11B.1.1.250.000569
ORF1ab/nsp374P74LcCacTa11B.1.1.3110.000358
ORF1ab/nsp374P74LcCacTa11B.1.1.3180.000302
ORF1ab/nsp374P74LcCacTa11B.1.1.3620.005618
ORF1ab/nsp374P74LcCacTa11B.1.1.5190.00004
ORF1ab/nsp374P74LcCacTa11B.1.1.5240.020833
ORF1ab/nsp374P74LcCacTa11B.1.2320.000537
ORF1ab/nsp374P74LcCacTa11B.1.3330.010526
ORF1ab/nsp374P74LcCacTa11B.1.360.000146
ORF1ab/nsp374P74LcCacTa11B.1.4590.004082
ORF1ab/nsp374P74LcCacTa11B.1.5820.000491
ORF1ab/nsp374P74LcCacTa11C.360.000911
ORF1ab/nsp374P74LcCacTa11N.30.005814
ORF1ab/nsp374P74LcCacTa11P.1.140.000048
ORF1ab/nsp374P74LcCacTa11P.1.150.000232
ORF1ab/nsp374P74LcCacTa11R.10.00009