CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 737

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3737N737DN1555DnonsynAatGat387738750.9994844928-4930
ORF1ab/nsp3737N737DN1555DnonsynAaTGaC387720.0005158634928-4930
ORF1ab/nsp3737N737NN1555NsynaaTaaC1360136014928-4930
ORF1ab/nsp3737N737SN1555SnonsynaAtaGt1731710.9884394928-4930
ORF1ab/nsp3737N737SN1555SnonsynaATaGC17320.01156074928-4930
ORF1ab/nsp3737N737TN1555TnonsynaAtaCt1401370.9785714928-4930
ORF1ab/nsp3737N737TN1555TnonsynaATaCC14030.02142864928-4930
ORF1ab/nsp3737N737delN1555deldelAAT---616114928-4930
ORF1ab/nsp3737N737YN1555YnonsynAatTat24220.9166674928-4930
ORF1ab/nsp3737N737YN1555YnonsynAaTTaC2420.08333334928-4930
ORF1ab/nsp3737N737KN1555KnonsynaaTaaG23210.9130434928-4930
ORF1ab/nsp3737N737KN1555KnonsynaaTaaA2320.08695654928-4930
ORF1ab/nsp3737N737VN1555VnonsynAATGTC730.4285714928-4930
ORF1ab/nsp3737N737VN1555VnonsynAATGTA720.2857144928-4930
ORF1ab/nsp3737N737VN1555VnonsynAAtGTt720.2857144928-4930
ORF1ab/nsp3737N737HN1555HnonsynAatCat540.84928-4930
ORF1ab/nsp3737N737HN1555HnonsynAaTCaC510.24928-4930
ORF1ab/nsp3737N737FN1555FnonsynAAtTTt420.54928-4930
ORF1ab/nsp3737N737FN1555FnonsynAATTTC420.54928-4930
ORF1ab/nsp3737N737EN1555EnonsynAaTGaA3314928-4930
ORF1ab/nsp3737N737XN1555XnonsynAaTTaA3314928-4930
ORF1ab/nsp3737N737RN1555RnonsynAAtCGt320.6666674928-4930
ORF1ab/nsp3737N737RN1555RnonsynaATaGA310.3333334928-4930
ORF1ab/nsp3737N737LN1555LnonsynAATTTA2214928-4930
ORF1ab/nsp3737N737GN1555GnonsynAATGGA210.54928-4930
ORF1ab/nsp3737N737PN1555PnonsynAAtCCt210.54928-4930
ORF1ab/nsp3737N737PN1555PnonsynAATCCC210.54928-4930
ORF1ab/nsp3737N737GN1555GnonsynAAtGGt210.54928-4930
ORF1ab/nsp3737N737CN1555CnonsynAAtTGt1114928-4930
ORF1ab/nsp3737N737del1N1555del1delAat-at1114928-4930
ORF1ab/nsp3737N737IN1555InonsynaAtaTt1114928-4930

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3737N737DAatGat38753877All0.000741
ORF1ab/nsp3737N737DAaTGaC23877All0
ORF1ab/nsp3737N737DAatGat35373537AY.60.145472
ORF1ab/nsp3737N737NaaTaaC13601360All0.00026
ORF1ab/nsp3737N737NaaTaaC10751075AY.40.001673
ORF1ab/nsp3737N737SaAtaGt171173All0.000033
ORF1ab/nsp3737N737SaATaGC2173All0
ORF1ab/nsp3737N737TaAtaCt137140All0.000026
ORF1ab/nsp3737N737TaATaCC3140All0.000001
ORF1ab/nsp3737N737DAatGat127127B.1.617.20.000478
ORF1ab/nsp3737N737TaAtaCt8282AY.4.30.069024
ORF1ab/nsp3737N737DAatGat6868AY.30.000676
ORF1ab/nsp3737N737NaaTaaC6363B.1.1770.00083
ORF1ab/nsp3737N737delAAT---6161All0.000012
ORF1ab/nsp3737N737SaAtaGt4545B.1.177.590.725806
ORF1ab/nsp3737N737TaAtaCt4343B.1.177.70.007089
ORF1ab/nsp3737N737SaAtaGt4141B.1.1.70.000037
ORF1ab/nsp3737N737NaaTaaC3131B.1.1.70.000028
ORF1ab/nsp3737N737DAatGat2626AY.50.000537
ORF1ab/nsp3737N737YAatTat2224All0.000004
ORF1ab/nsp3737N737YAaTTaC224All0
ORF1ab/nsp3737N737delAAT---2424B.1.1.70.000021
ORF1ab/nsp3737N737KaaTaaG2123All0.000004
ORF1ab/nsp3737N737KaaTaaA223All0
ORF1ab/nsp3737N737NaaTaaC2121B.1.1.5280.100962
ORF1ab/nsp3737N737NaaTaaC1919AY.430.000084
ORF1ab/nsp3737N737DAatGat1919B.1.1.70.000017
ORF1ab/nsp3737N737SaAtaGt1818AY.250.000108
ORF1ab/nsp3737N737NaaTaaC1717B.1.617.20.000064
ORF1ab/nsp3737N737DAatGat1515AY.420.000603
ORF1ab/nsp3737N737DAatGat1414AY.40.000022
ORF1ab/nsp3737N737SaAtaGt1414B.1.177.600.003058
ORF1ab/nsp3737N737DAatGat1111AY.430.000049
ORF1ab/nsp3737N737NaaTaaC1111AY.46.50.002183
ORF1ab/nsp3737N737NaaTaaC1010N.60.070922
ORF1ab/nsp3737N737NaaTaaC99AY.250.000054
ORF1ab/nsp3737N737NaaTaaC99B.1.3670.007132
ORF1ab/nsp3737N737KaaTaaG88AY.260.000226
ORF1ab/nsp3737N737VAATGTC37All0.000001
ORF1ab/nsp3737N737VAATGTA27All0
ORF1ab/nsp3737N737VAAtGTt27All0
ORF1ab/nsp3737N737NaaTaaC77AY.1030.000043
ORF1ab/nsp3737N737VAAtGTt260.111111
ORF1ab/nsp3737N737VAATGTC260.111111
ORF1ab/nsp3737N737VAATGTA260.111111
ORF1ab/nsp3737N737SaAtaGt66AY.430.000027
ORF1ab/nsp3737N737SaAtaGt66P.10.000095
ORF1ab/nsp3737N737DAatGat66P.10.000095
ORF1ab/nsp3737N737HAatCat45All0.000001
ORF1ab/nsp3737N737HAaTCaC15All0
ORF1ab/nsp3737N737DAatGat55AY.440.00003
ORF1ab/nsp3737N737NaaTaaC55B.10.000046
ORF1ab/nsp3737N737NaaTaaC55B.1.5260.000118
ORF1ab/nsp3737N737NaaTaaC55P.1.150.001162
ORF1ab/nsp3737N737FAATTTC240.111111
ORF1ab/nsp3737N737FAAtTTt240.111111
ORF1ab/nsp3737N737FAAtTTt24All0
ORF1ab/nsp3737N737FAATTTC24All0
ORF1ab/nsp3737N737NaaTaaC44AY.440.000024
ORF1ab/nsp3737N737DAatGat44AY.580.00363
ORF1ab/nsp3737N737SaAtaGt44AY.750.000224
ORF1ab/nsp3737N737SaAtaGt44AY.9.10.000335
ORF1ab/nsp3737N737SaAtaGt34B.10.000027
ORF1ab/nsp3737N737SaATaGC14B.10.000009
ORF1ab/nsp3737N737NaaTaaC44B.1.1.340.052632
ORF1ab/nsp3737N737NaaTaaC44B.1.1.5190.000159
ORF1ab/nsp3737N737YAatTat44B.1.1.70.000004
ORF1ab/nsp3737N737delAAT---44B.1.1770.000053
ORF1ab/nsp3737N737XAaTTaA33All0.000001
ORF1ab/nsp3737N737EAaTGaA33All0.000001
ORF1ab/nsp3737N737RAAtCGt23All0
ORF1ab/nsp3737N737RaATaGA13All0
ORF1ab/nsp3737N737DAatGat33AY.1060.001005
ORF1ab/nsp3737N737TaAtaCt33AY.260.000085
ORF1ab/nsp3737N737NaaTaaC33AY.290.000047
ORF1ab/nsp3737N737delAAT---33AY.430.000013
ORF1ab/nsp3737N737DAatGat33AY.670.001393
ORF1ab/nsp3737N737SaAtaGt33B.1.10.000054
ORF1ab/nsp3737N737DAatGat33B.1.10.000054
ORF1ab/nsp3737N737NaaTaaC33B.1.1.390.001529
ORF1ab/nsp3737N737KaaTaaG33B.1.1.70.000003
ORF1ab/nsp3737N737NaaTaaC33B.1.177.810.000568
ORF1ab/nsp3737N737NaaTaaC33B.1.2210.000213
ORF1ab/nsp3737N737NaaTaaC33B.1.36.70.012
ORF1ab/nsp3737N737YAatTat33B.1.617.20.000011
ORF1ab/nsp3737N737NaaTaaC33P.10.000047
ORF1ab/nsp3737N737LAATTTA220.111111
ORF1ab/nsp3737N737XAaTTaA220.111111
ORF1ab/nsp3737N737YAaTTaC220.111111
ORF1ab/nsp3737N737EAaTGaA220.111111
ORF1ab/nsp3737N737DAaTGaC220.111111
ORF1ab/nsp3737N737NaaTaaC22A.2.30.009479
ORF1ab/nsp3737N737NaaTaaC22A.2.50.000998
ORF1ab/nsp3737N737LAATTTA22All0
ORF1ab/nsp3737N737PAAtCCt12All0
ORF1ab/nsp3737N737PAATCCC12All0
ORF1ab/nsp3737N737GAAtGGt12All0
ORF1ab/nsp3737N737GAATGGA12All0
ORF1ab/nsp3737N737NaaTaaC22AY.1000.000092
ORF1ab/nsp3737N737DAatGat22AY.1080.002205
ORF1ab/nsp3737N737DAatGat22AY.1110.000366
ORF1ab/nsp3737N737YAatTat22AY.116.10.000623
ORF1ab/nsp3737N737YAatTat22AY.250.000012
ORF1ab/nsp3737N737DAatGat22AY.390.000049
ORF1ab/nsp3737N737SaAtaGt22AY.390.000049
ORF1ab/nsp3737N737delAAT---22AY.40.000003
ORF1ab/nsp3737N737TaAtaCt22AY.40.000003
ORF1ab/nsp3737N737SaAtaGt22AY.40.000003
ORF1ab/nsp3737N737NaaTaaC22AY.46.40.000329
ORF1ab/nsp3737N737DAatGat22AY.470.000062
ORF1ab/nsp3737N737SaAtaGt22AY.470.000062
ORF1ab/nsp3737N737NaaTaaC22AY.50.000041
ORF1ab/nsp3737N737YAatTat22AY.98.10.000097
ORF1ab/nsp3737N737HAatCat12B.10.000009
ORF1ab/nsp3737N737HAaTCaC12B.10.000009
ORF1ab/nsp3737N737PAATCCC12B.10.000009
ORF1ab/nsp3737N737PAAtCCt12B.10.000009
ORF1ab/nsp3737N737NaaTaaC22B.1.10.000036
ORF1ab/nsp3737N737GAATGGA12B.1.10.000018
ORF1ab/nsp3737N737GAAtGGt12B.1.10.000018
ORF1ab/nsp3737N737NaaTaaC22B.1.1.370.000386
ORF1ab/nsp3737N737RAAtCGt22B.1.1.70.000002
ORF1ab/nsp3737N737NaaTaaC22B.1.20.000018
ORF1ab/nsp3737N737NaaTaaC22B.1.3510.000059
ORF1ab/nsp3737N737delAAT---22B.1.360.000292
ORF1ab/nsp3737N737SaAtaGt22B.1.4290.000047
ORF1ab/nsp3737N737YAatTat22B.1.4990.002101
ORF1ab/nsp3737N737delAAT---22B.1.6190.001742
ORF1ab/nsp3737N737SaAtaGt22P.1.140.000096
ORF1ab/nsp3737N737TaATaCC11A0.000387
ORF1ab/nsp3737N737delAAT---11A0.000387
ORF1ab/nsp3737N737delAAT---11A.2.20.001689
ORF1ab/nsp3737N737NaaTaaC11A.23.10.000704
ORF1ab/nsp3737N737DAatGat11A.23.10.000704
ORF1ab/nsp3737N737IaAtaTt11All0
ORF1ab/nsp3737N737CAAtTGt11All0
ORF1ab/nsp3737N737del1Aat-at11All0
ORF1ab/nsp3737N737DAatGat11AY.1000.000046
ORF1ab/nsp3737N737KaaTaaG11AY.1030.000006
ORF1ab/nsp3737N737SaAtaGt11AY.1130.000142
ORF1ab/nsp3737N737DAatGat11AY.1130.000142
ORF1ab/nsp3737N737DAatGat11AY.1140.000231
ORF1ab/nsp3737N737DAatGat11AY.1190.000035
ORF1ab/nsp3737N737SaAtaGt11AY.1190.000035
ORF1ab/nsp3737N737DAatGat11AY.1200.000037
ORF1ab/nsp3737N737KaaTaaA11AY.1200.000037
ORF1ab/nsp3737N737DAatGat11AY.140.000088
ORF1ab/nsp3737N737NaaTaaC11AY.200.000039
ORF1ab/nsp3737N737DAatGat11AY.230.00007
ORF1ab/nsp3737N737TaAtaCt11AY.240.000431
ORF1ab/nsp3737N737DAatGat11AY.250.000006
ORF1ab/nsp3737N737NaaTaaC11AY.260.000028
ORF1ab/nsp3737N737TaATaCC11AY.30.00001
ORF1ab/nsp3737N737KaaTaaG11AY.30.00001
ORF1ab/nsp3737N737delAAT---11AY.30.00001
ORF1ab/nsp3737N737SaAtaGt11AY.30.00001
ORF1ab/nsp3737N737NaaTaaC11AY.3.10.000085
ORF1ab/nsp3737N737DAatGat11AY.310.018519
ORF1ab/nsp3737N737NaaTaaC11AY.390.000025
ORF1ab/nsp3737N737YAatTat11AY.40.000002
ORF1ab/nsp3737N737KaaTaaG11AY.40.000002
ORF1ab/nsp3737N737HAatCat11AY.40.000002
ORF1ab/nsp3737N737NaaTaaC11AY.4.20.000022
ORF1ab/nsp3737N737YAatTat11AY.4.20.000022
ORF1ab/nsp3737N737YAatTat11AY.4.50.000107
ORF1ab/nsp3737N737TaAtaCt11AY.420.00004
ORF1ab/nsp3737N737NaaTaaC11AY.420.00004
ORF1ab/nsp3737N737TaAtaCt11AY.430.000004
ORF1ab/nsp3737N737SaAtaGt11AY.440.000006
ORF1ab/nsp3737N737KaaTaaG11AY.440.000006
ORF1ab/nsp3737N737CAAtTGt11AY.440.000006
ORF1ab/nsp3737N737TaATaCC11AY.440.000006
ORF1ab/nsp3737N737SaAtaGt11AY.450.000122
ORF1ab/nsp3737N737DAatGat11AY.450.000122
ORF1ab/nsp3737N737DAatGat11AY.460.000104
ORF1ab/nsp3737N737NaaTaaC11AY.460.000104
ORF1ab/nsp3737N737delAAT---11AY.46.20.000635
ORF1ab/nsp3737N737TaAtaCt11AY.46.20.000635
ORF1ab/nsp3737N737DAatGat11AY.46.60.000072
ORF1ab/nsp3737N737KaaTaaG11AY.50.000021
ORF1ab/nsp3737N737DAatGat11AY.5.30.000337
ORF1ab/nsp3737N737DAatGat11AY.520.000814
ORF1ab/nsp3737N737NaaTaaC11AY.590.00053
ORF1ab/nsp3737N737YAatTat11AY.60.000041
ORF1ab/nsp3737N737NaaTaaC11AY.60.000041
ORF1ab/nsp3737N737SaAtaGt11AY.620.000436
ORF1ab/nsp3737N737delAAT---11AY.670.000464
ORF1ab/nsp3737N737SaAtaGt11AY.75.10.00018
ORF1ab/nsp3737N737NaaTaaC11AY.910.00073
ORF1ab/nsp3737N737KaaTaaG11AY.920.000287
ORF1ab/nsp3737N737DAatGat11AY.930.000273
ORF1ab/nsp3737N737delAAT---11AY.940.000443
ORF1ab/nsp3737N737delAAT---11AY.990.001049
ORF1ab/nsp3737N737DAatGat11AY.990.001049
ORF1ab/nsp3737N737SaAtaGt11AY.99.20.000092
ORF1ab/nsp3737N737delAAT---11B.10.000009
ORF1ab/nsp3737N737DAatGat11B.10.000009
ORF1ab/nsp3737N737EAaTGaA11B.1.10.000018
ORF1ab/nsp3737N737KaaTaaA11B.1.10.000018
ORF1ab/nsp3737N737RaATaGA11B.1.10.000018
ORF1ab/nsp3737N737delAAT---11B.1.1.1390.022727
ORF1ab/nsp3737N737NaaTaaC11B.1.1.1410.002012
ORF1ab/nsp3737N737delAAT---11B.1.1.1420.017544
ORF1ab/nsp3737N737YAatTat11B.1.1.1710.003676
ORF1ab/nsp3737N737DAatGat11B.1.1.250.000569
ORF1ab/nsp3737N737SaAtaGt11B.1.1.3010.001179
ORF1ab/nsp3737N737HAatCat11B.1.1.3710.010417
ORF1ab/nsp3737N737NaaTaaC11B.1.1.3950.055556
ORF1ab/nsp3737N737delAAT---11B.1.1.4090.002833
ORF1ab/nsp3737N737KaaTaaG11B.1.1.5190.00004
ORF1ab/nsp3737N737IaAtaTt11B.1.1.70.000001
ORF1ab/nsp3737N737delAAT---11B.1.1570.002985
ORF1ab/nsp3737N737NaaTaaC11B.1.1600.000031
ORF1ab/nsp3737N737delAAT---11B.1.1600.000031
ORF1ab/nsp3737N737SaAtaGt11B.1.1770.000013
ORF1ab/nsp3737N737TaAtaCt11B.1.177.100.000878
ORF1ab/nsp3737N737SaAtaGt11B.1.177.120.000152
ORF1ab/nsp3737N737SaAtaGt11B.1.177.170.000821
ORF1ab/nsp3737N737SaAtaGt11B.1.177.210.000076
ORF1ab/nsp3737N737NaaTaaC11B.1.177.430.001477
ORF1ab/nsp3737N737delAAT---11B.1.177.500.004695
ORF1ab/nsp3737N737delAAT---11B.1.177.540.000606
ORF1ab/nsp3737N737delAAT---11B.1.177.630.002703
ORF1ab/nsp3737N737delAAT---11B.1.177.870.000728
ORF1ab/nsp3737N737XAaTTaA11B.1.20.000009
ORF1ab/nsp3737N737KaaTaaG11B.1.20.000009
ORF1ab/nsp3737N737YAatTat11B.1.20.000009
ORF1ab/nsp3737N737DAatGat11B.1.20.000009
ORF1ab/nsp3737N737delAAT---11B.1.2100.002132
ORF1ab/nsp3737N737NaaTaaC11B.1.2310.032258
ORF1ab/nsp3737N737NaaTaaC11B.1.2340.000132
ORF1ab/nsp3737N737YAatTat11B.1.2400.000216
ORF1ab/nsp3737N737DAatGat11B.1.2580.000067
ORF1ab/nsp3737N737NaaTaaC11B.1.258.110.000396
ORF1ab/nsp3737N737KaaTaaG11B.1.2890.00266
ORF1ab/nsp3737N737delAAT---11B.1.3190.003049
ORF1ab/nsp3737N737del1Aat-at11B.1.3360.002439
ORF1ab/nsp3737N737DAatGat11B.1.360.000146
ORF1ab/nsp3737N737SaAtaGt11B.1.360.000146
ORF1ab/nsp3737N737delAAT---11B.1.4090.000781
ORF1ab/nsp3737N737SaATaGC11B.1.4150.014286
ORF1ab/nsp3737N737NaaTaaC11B.1.5250.000113
ORF1ab/nsp3737N737SaAtaGt11B.1.5260.000024
ORF1ab/nsp3737N737NaaTaaC11B.1.6000.005848
ORF1ab/nsp3737N737delAAT---11B.1.617.10.000129
ORF1ab/nsp3737N737NaaTaaC11B.1.617.10.000129
ORF1ab/nsp3737N737KaaTaaG11B.1.617.20.000004
ORF1ab/nsp3737N737SaAtaGt11B.1.617.20.000004
ORF1ab/nsp3737N737VAATGTC11B.1.617.20.000004
ORF1ab/nsp3737N737TaAtaCt11B.1.617.20.000004
ORF1ab/nsp3737N737delAAT---11B.1.617.20.000004
ORF1ab/nsp3737N737HAatCat11B.1.617.20.000004
ORF1ab/nsp3737N737DAatGat11B.1.6210.000089
ORF1ab/nsp3737N737NaaTaaC11B.1.6210.000089
ORF1ab/nsp3737N737NaaTaaC11B.1.621.10.000506
ORF1ab/nsp3737N737SaAtaGt11B.1.6280.000352
ORF1ab/nsp3737N737DAatGat11B.1.6370.000073
ORF1ab/nsp3737N737delAAT---11B.150.017544
ORF1ab/nsp3737N737DAatGat11D.20.000075
ORF1ab/nsp3737N737delAAT---11P.10.000016
ORF1ab/nsp3737N737TaAtaCt11P.10.000016
ORF1ab/nsp3737N737NaaTaaC11P.1.120.000484
ORF1ab/nsp3737N737DAatGat11P.1.70.000319
ORF1ab/nsp3737N737NaaTaaC11Q.10.000126