CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 736

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3736D736DD1554DsyngaCgaT173701737014925-4927
ORF1ab/nsp3736D736YD1554YnonsynGacTac9599560.9968724925-4927
ORF1ab/nsp3736D736YD1554YnonsynGaCTaT95930.003128264925-4927
ORF1ab/nsp3736D736GD1554GnonsyngAcgGc7247210.9958564925-4927
ORF1ab/nsp3736D736GD1554GnonsyngACgGT72430.004143654925-4927
ORF1ab/nsp3736D736AD1554AnonsyngAcgCc3593540.9860724925-4927
ORF1ab/nsp3736D736AD1554AnonsyngACgCA35930.008356554925-4927
ORF1ab/nsp3736D736AD1554AnonsyngACgCT35920.005571034925-4927
ORF1ab/nsp3736D736ND1554NnonsynGacAac1231210.983744925-4927
ORF1ab/nsp3736D736ND1554NnonsynGaCAaT12320.01626024925-4927
ORF1ab/nsp3736D736ED1554EnonsyngaCgaA66420.6363644925-4927
ORF1ab/nsp3736D736ED1554EnonsyngaCgaG66240.3636364925-4927
ORF1ab/nsp3736D736delD1554deldelGAC---636314925-4927
ORF1ab/nsp3736D736HD1554HnonsynGacCac121214925-4927
ORF1ab/nsp3736D736VD1554VnonsyngACgTT930.3333334925-4927
ORF1ab/nsp3736D736VD1554VnonsyngAcgTc930.3333334925-4927
ORF1ab/nsp3736D736VD1554VnonsyngACgTA920.2222224925-4927
ORF1ab/nsp3736D736VD1554VnonsyngACgTG910.1111114925-4927
ORF1ab/nsp3736D736SD1554SnonsynGAcAGc840.54925-4927
ORF1ab/nsp3736D736SD1554SnonsynGACAGT820.254925-4927
ORF1ab/nsp3736D736SD1554SnonsynGACTCT810.1254925-4927
ORF1ab/nsp3736D736SD1554SnonsynGACTCA810.1254925-4927
ORF1ab/nsp3736D736ID1554InonsynGACATT530.64925-4927
ORF1ab/nsp3736D736ID1554InonsynGAcATc520.44925-4927
ORF1ab/nsp3736D736TD1554TnonsynGAcACc3314925-4927
ORF1ab/nsp3736D736XD1554XnonsynGaCTaA2214925-4927
ORF1ab/nsp3736D736KD1554KnonsynGaCAaA2214925-4927
ORF1ab/nsp3736D736del1D1554del1delgaCga-210.54925-4927
ORF1ab/nsp3736D736del2D1554del2delGAc--c210.54925-4927
ORF1ab/nsp3736D736RD1554RnonsynGACCGT210.54925-4927
ORF1ab/nsp3736D736del2D1554del2delgACg--210.54925-4927
ORF1ab/nsp3736D736del1D1554del1delgAcg-c210.54925-4927
ORF1ab/nsp3736D736RD1554RnonsynGACAGA210.54925-4927

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3736D736DgaCgaT1737017370All0.003322
ORF1ab/nsp3736D736DgaCgaT1066710667AY.99.20.983043
ORF1ab/nsp3736D736DgaCgaT10531053AY.460.109596
ORF1ab/nsp3736D736DgaCgaT10341034B.1.1.70.000926
ORF1ab/nsp3736D736YGacTac956959All0.000183
ORF1ab/nsp3736D736YGaCTaT3959All0.000001
ORF1ab/nsp3736D736GgAcgGc721724All0.000138
ORF1ab/nsp3736D736GgACgGT3724All0.000001
ORF1ab/nsp3736D736GgAcgGc605606P.30.964912
ORF1ab/nsp3736D736GgACgGT1606P.30.001595
ORF1ab/nsp3736D736DgaCgaT527527AY.40.00082
ORF1ab/nsp3736D736AgAcgCc354359All0.000068
ORF1ab/nsp3736D736AgACgCA3359All0.000001
ORF1ab/nsp3736D736AgACgCT2359All0
ORF1ab/nsp3736D736DgaCgaT279279AY.440.001698
ORF1ab/nsp3736D736DgaCgaT277277B.1.1770.003647
ORF1ab/nsp3736D736DgaCgaT266266B.1.617.20.001002
ORF1ab/nsp3736D736DgaCgaT208208AY.430.000922
ORF1ab/nsp3736D736DgaCgaT197197B.1.2340.025993
ORF1ab/nsp3736D736AgAcgCc177177B.1.1.3650.988827
ORF1ab/nsp3736D736DgaCgaT169169B.1.1.5210.903743
ORF1ab/nsp3736D736YGacTac156156AY.30.001552
ORF1ab/nsp3736D736YGacTac154154AY.40.00024
ORF1ab/nsp3736D736DgaCgaT153153P.10.00241
ORF1ab/nsp3736D736AgAcgCc139139B.1.1.70.000124
ORF1ab/nsp3736D736DgaCgaT135135B.10.001237
ORF1ab/nsp3736D736NGacAac121123All0.000023
ORF1ab/nsp3736D736NGaCAaT2123All0
ORF1ab/nsp3736D736DgaCgaT118118AY.30.001174
ORF1ab/nsp3736D736DgaCgaT118118B.1.20.001039
ORF1ab/nsp3736D736DgaCgaT117117AY.3.10.009975
ORF1ab/nsp3736D736DgaCgaT9696AY.250.000577
ORF1ab/nsp3736D736DgaCgaT6969B.1.10.001252
ORF1ab/nsp3736D736EgaCgaA4266All0.000008
ORF1ab/nsp3736D736EgaCgaG2466All0.000005
ORF1ab/nsp3736D736YGacTac6666B.1.1.70.000059
ORF1ab/nsp3736D736DgaCgaT6666B.1.6280.023256
ORF1ab/nsp3736D736DgaCgaT6565AY.1030.000404
ORF1ab/nsp3736D736delGAC---6363All0.000012
ORF1ab/nsp3736D736YGacTac5859B.1.617.20.000218
ORF1ab/nsp3736D736YGaCTaT159B.1.617.20.000004
ORF1ab/nsp3736D736DgaCgaT5757AY.260.001614
ORF1ab/nsp3736D736DgaCgaT5757B.1.1.2740.287879
ORF1ab/nsp3736D736YGacTac5757B.1.2430.003966
ORF1ab/nsp3736D736DgaCgaT5151B.1.1600.001591
ORF1ab/nsp3736D736DgaCgaT5151B.1.2210.003623
ORF1ab/nsp3736D736DgaCgaT5050AY.4.20.001084
ORF1ab/nsp3736D736YGacTac4646B.1.1600.001435
ORF1ab/nsp3736D736YGacTac4545AY.1170.003803
ORF1ab/nsp3736D736DgaCgaT4141B.1.3490.029307
ORF1ab/nsp3736D736DgaCgaT4040B.1.6370.002923
ORF1ab/nsp3736D736DgaCgaT3838AY.200.001477
ORF1ab/nsp3736D736DgaCgaT3838P.1.90.182692
ORF1ab/nsp3736D736YGacTac3737AY.250.000223
ORF1ab/nsp3736D736YGacTac3434AY.430.000151
ORF1ab/nsp3736D736DgaCgaT3131B.1.2430.002157
ORF1ab/nsp3736D736DgaCgaT3131B.1.4290.000729
ORF1ab/nsp3736D736DgaCgaT3030AY.230.002092
ORF1ab/nsp3736D736DgaCgaT3030B.1.177.210.002294
ORF1ab/nsp3736D736DgaCgaT2929AY.1020.000769
ORF1ab/nsp3736D736DgaCgaT2929AY.1190.001024
ORF1ab/nsp3736D736DgaCgaT2929AY.310.537037
ORF1ab/nsp3736D736DgaCgaT2828B.1.1.3840.666667
ORF1ab/nsp3736D736DgaCgaT2828B.1.1.5190.001112
ORF1ab/nsp3736D736YGacTac2727AY.1030.000168
ORF1ab/nsp3736D736DgaCgaT2626P.1.140.001243
ORF1ab/nsp3736D736delGAC---2525B.1.1.70.000022
ORF1ab/nsp3736D736DgaCgaT2525B.1.5260.000588
ORF1ab/nsp3736D736DgaCgaT2323B.1.1.2160.020481
ORF1ab/nsp3736D736DgaCgaT2222AY.330.001469
ORF1ab/nsp3736D736EgaCgaG2222AY.46.20.013977
ORF1ab/nsp3736D736DgaCgaT2121AY.1000.000966
ORF1ab/nsp3736D736YGacTac2020AY.1020.00053
ORF1ab/nsp3736D736DgaCgaT2020AY.29.10.00441
ORF1ab/nsp3736D736DgaCgaT2020AY.60.000823
ORF1ab/nsp3736D736NGacAac1919AY.250.000114
ORF1ab/nsp3736D736NGacAac1919AY.440.000116
ORF1ab/nsp3736D736DgaCgaT1919AY.98.10.00092
ORF1ab/nsp3736D736DgaCgaT1919B.1.5170.008113
ORF1ab/nsp3736D736YGacTac1818B.1.1770.000237
ORF1ab/nsp3736D736DgaCgaT1818B.1.177.810.003408
ORF1ab/nsp3736D736DgaCgaT1717P.1.100.004581
ORF1ab/nsp3736D736NGacAac1616AY.1030.000099
ORF1ab/nsp3736D736DgaCgaT1616B.1.160.300.047619
ORF1ab/nsp3736D736DgaCgaT1515AY.50.00031
ORF1ab/nsp3736D736GgAcgGc1515B.10.000137
ORF1ab/nsp3736D736YGacTac1415B.1.10.000254
ORF1ab/nsp3736D736YGaCTaT115B.1.10.000018
ORF1ab/nsp3736D736DgaCgaT1515B.1.1.1770.288462
ORF1ab/nsp3736D736DgaCgaT1515B.1.1.2140.000832
ORF1ab/nsp3736D736GgAcgGc1515B.1.1.70.000013
ORF1ab/nsp3736D736DgaCgaT1515B.1.177.50.018634
ORF1ab/nsp3736D736DgaCgaT1414AY.1180.000877
ORF1ab/nsp3736D736YGacTac1414AY.420.000563
ORF1ab/nsp3736D736DgaCgaT1414AY.740.001619
ORF1ab/nsp3736D736DgaCgaT1414B.1.1.2770.010622
ORF1ab/nsp3736D736DgaCgaT1414B.1.2580.000932
ORF1ab/nsp3736D736GgAcgGc1414B.1.617.20.000053
ORF1ab/nsp3736D736YGacTac1313AY.390.000321
ORF1ab/nsp3736D736DgaCgaT1313AY.450.001582
ORF1ab/nsp3736D736DgaCgaT1313AY.46.60.000939
ORF1ab/nsp3736D736DgaCgaT1313AY.770.014656
ORF1ab/nsp3736D736DgaCgaT1313AZ.10.011275
ORF1ab/nsp3736D736YGacTac1313B.10.000119
ORF1ab/nsp3736D736NGacAac1313B.1.1.70.000012
ORF1ab/nsp3736D736YGacTac1313B.1.20.000114
ORF1ab/nsp3736D736DgaCgaT1313C.370.001509
ORF1ab/nsp3736D736HGacCac1212All0.000002
ORF1ab/nsp3736D736DgaCgaT1212AY.120.003793
ORF1ab/nsp3736D736DgaCgaT1212AY.390.000297
ORF1ab/nsp3736D736YGacTac1212AY.4.20.00026
ORF1ab/nsp3736D736DgaCgaT1212AY.4.40.00491
ORF1ab/nsp3736D736DgaCgaT1212AY.470.000373
ORF1ab/nsp3736D736YGacTac1212B.1.1.4320.01519
ORF1ab/nsp3736D736GgAcgGc1111AY.1030.000068
ORF1ab/nsp3736D736DgaCgaT1111AY.290.000174
ORF1ab/nsp3736D736AgAcgCc1111AY.40.000017
ORF1ab/nsp3736D736DgaCgaT1111AY.5.30.003711
ORF1ab/nsp3736D736YGacTac1111B.1.6200.010407
ORF1ab/nsp3736D736DgaCgaT1010B.1.1.740.043103
ORF1ab/nsp3736D736DgaCgaT1010B.1.351.20.003026
ORF1ab/nsp3736D736VgACgTT39All0.000001
ORF1ab/nsp3736D736VgAcgTc39All0.000001
ORF1ab/nsp3736D736VgACgTA29All0
ORF1ab/nsp3736D736VgACgTG19All0
ORF1ab/nsp3736D736DgaCgaT99AY.9.20.000331
ORF1ab/nsp3736D736DgaCgaT99B.1.3510.000268
ORF1ab/nsp3736D736EgaCgaA99B.1.617.20.000034
ORF1ab/nsp3736D736SGAcAGc48All0.000001
ORF1ab/nsp3736D736SGACAGT28All0
ORF1ab/nsp3736D736SGACTCA18All0
ORF1ab/nsp3736D736SGACTCT18All0
ORF1ab/nsp3736D736EgaCgaA88AY.1020.000212
ORF1ab/nsp3736D736DgaCgaT88AY.120.2.10.003986
ORF1ab/nsp3736D736DgaCgaT88AY.140.000704
ORF1ab/nsp3736D736DgaCgaT88AY.20.002849
ORF1ab/nsp3736D736YGacTac88AY.440.000049
ORF1ab/nsp3736D736DgaCgaT88AY.750.000448
ORF1ab/nsp3736D736DgaCgaT88B.1.3670.006339
ORF1ab/nsp3736D736DgaCgaT88B.1.6210.000708
ORF1ab/nsp3736D736DgaCgaT88P.1.150.001859
ORF1ab/nsp3736D736DgaCgaT88P.20.001493
ORF1ab/nsp3736D736YGacTac77AY.1160.002007
ORF1ab/nsp3736D736DgaCgaT77AY.1170.000592
ORF1ab/nsp3736D736AgAcgCc77AY.250.000042
ORF1ab/nsp3736D736NGacAac77AY.30.00007
ORF1ab/nsp3736D736NGacAac77AY.40.000011
ORF1ab/nsp3736D736DgaCgaT77B.1.1.2180.053846
ORF1ab/nsp3736D736DgaCgaT77B.1.1.2220.001428
ORF1ab/nsp3736D736DgaCgaT77B.1.1.500.004752
ORF1ab/nsp3736D736DgaCgaT77B.1.2140.025641
ORF1ab/nsp3736D736YGacTac77B.1.36.290.003621
ORF1ab/nsp3736D736YGacTac77P.10.00011
ORF1ab/nsp3736D736VgACgTA260.111111
ORF1ab/nsp3736D736VgAcgTc260.111111
ORF1ab/nsp3736D736VgACgTT260.111111
ORF1ab/nsp3736D736YGacTac66AY.260.00017
ORF1ab/nsp3736D736DgaCgaT66AY.270.000388
ORF1ab/nsp3736D736GgAcgGc66AY.40.000009
ORF1ab/nsp3736D736DgaCgaT66AY.4.2.10.000894
ORF1ab/nsp3736D736YGacTac66AY.450.00073
ORF1ab/nsp3736D736DgaCgaT66AY.46.40.000987
ORF1ab/nsp3736D736DgaCgaT66AY.840.002625
ORF1ab/nsp3736D736DgaCgaT66B.1.1.280.001867
ORF1ab/nsp3736D736DgaCgaT66B.1.36.290.003104
ORF1ab/nsp3736D736DgaCgaT66B.1.80.011834
ORF1ab/nsp3736D736GgAcgGc55A0.001935
ORF1ab/nsp3736D736IGACATT35All0.000001
ORF1ab/nsp3736D736IGAcATc25All0
ORF1ab/nsp3736D736DgaCgaT55AY.1100.000563
ORF1ab/nsp3736D736DgaCgaT55AY.1130.000712
ORF1ab/nsp3736D736DgaCgaT55AY.1210.000677
ORF1ab/nsp3736D736YGacTac55AY.200.000194
ORF1ab/nsp3736D736GgAcgGc55AY.250.00003
ORF1ab/nsp3736D736DgaCgaT55AY.320.002662
ORF1ab/nsp3736D736DgaCgaT55AY.540.000477
ORF1ab/nsp3736D736DgaCgaT55AY.920.001436
ORF1ab/nsp3736D736DgaCgaT55B.1.1.3170.002058
ORF1ab/nsp3736D736NGacAac55B.1.1.3970.011261
ORF1ab/nsp3736D736DgaCgaT55B.1.177.300.012563
ORF1ab/nsp3736D736DgaCgaT55B.1.177.570.001405
ORF1ab/nsp3736D736YGacTac55B.1.3510.000149
ORF1ab/nsp3736D736DgaCgaT55B.1.3620.007704
ORF1ab/nsp3736D736DgaCgaT55B.1.5960.000436
ORF1ab/nsp3736D736NGacAac55B.1.617.20.000019
ORF1ab/nsp3736D736DgaCgaT55P.1.170.000809
ORF1ab/nsp3736D736SGACAGT240.111111
ORF1ab/nsp3736D736IGACATT240.111111
ORF1ab/nsp3736D736SGAcAGc240.111111
ORF1ab/nsp3736D736GgAcgGc240.111111
ORF1ab/nsp3736D736GgACgGT240.111111
ORF1ab/nsp3736D736IGAcATc240.111111
ORF1ab/nsp3736D736DgaCgaT44A.20.002647
ORF1ab/nsp3736D736DgaCgaT44AY.1050.002572
ORF1ab/nsp3736D736YGacTac44AY.330.000267
ORF1ab/nsp3736D736DgaCgaT44AY.360.000593
ORF1ab/nsp3736D736DgaCgaT44AY.39.10.000158
ORF1ab/nsp3736D736DgaCgaT44AY.590.002119
ORF1ab/nsp3736D736GgAcgGc44AY.740.000463
ORF1ab/nsp3736D736YGacTac44AY.75.10.000721
ORF1ab/nsp3736D736DgaCgaT44AY.91.10.01626
ORF1ab/nsp3736D736YGacTac44AY.98.10.000194
ORF1ab/nsp3736D736DgaCgaT44B0.000511
ORF1ab/nsp3736D736DgaCgaT44B.1.1.1870.035398
ORF1ab/nsp3736D736DgaCgaT44B.1.1.250.002274
ORF1ab/nsp3736D736YGacTac44B.1.1.280.001245
ORF1ab/nsp3736D736DgaCgaT44B.1.1.2970.008949
ORF1ab/nsp3736D736delGAC---44B.1.1770.000053
ORF1ab/nsp3736D736DgaCgaT44B.1.177.600.000874
ORF1ab/nsp3736D736DgaCgaT44B.1.177.70.000659
ORF1ab/nsp3736D736DgaCgaT44B.1.360.000584
ORF1ab/nsp3736D736DgaCgaT44B.1.4270.000202
ORF1ab/nsp3736D736DgaCgaT44B.1.5950.001044
ORF1ab/nsp3736D736DgaCgaT44B.320.108108
ORF1ab/nsp3736D736NGacAac44D.50.0199
ORF1ab/nsp3736D736DgaCgaT44P.1.70.001277
ORF1ab/nsp3736D736TGAcACc33All0.000001
ORF1ab/nsp3736D736DgaCgaT33AY.10.001187
ORF1ab/nsp3736D736YGacTac33AY.1000.000138
ORF1ab/nsp3736D736EgaCgaA33AY.1000.000138
ORF1ab/nsp3736D736YGacTac33AY.1210.000406
ORF1ab/nsp3736D736DgaCgaT33AY.160.001139
ORF1ab/nsp3736D736DgaCgaT33AY.16.10.00141
ORF1ab/nsp3736D736YGacTac33AY.230.000209
ORF1ab/nsp3736D736DgaCgaT33AY.340.000291
ORF1ab/nsp3736D736YGacTac33AY.360.000445
ORF1ab/nsp3736D736GgAcgGc33AY.430.000013
ORF1ab/nsp3736D736delGAC---33AY.430.000013
ORF1ab/nsp3736D736AgAcgCc33AY.440.000018
ORF1ab/nsp3736D736DgaCgaT33AY.46.30.002801
ORF1ab/nsp3736D736DgaCgaT33AY.46.50.000595
ORF1ab/nsp3736D736DgaCgaT33AY.510.002727
ORF1ab/nsp3736D736DgaCgaT33AY.610.000314
ORF1ab/nsp3736D736DgaCgaT33AY.9.10.000251
ORF1ab/nsp3736D736NGacAac33B.10.000027
ORF1ab/nsp3736D736EgaCgaA33B.10.000027
ORF1ab/nsp3736D736EgaCgaA33B.1.10.000054
ORF1ab/nsp3736D736YGacTac33B.1.1.1700.003741
ORF1ab/nsp3736D736DgaCgaT33B.1.1.2630.004673
ORF1ab/nsp3736D736DgaCgaT33B.1.1.2840.000322
ORF1ab/nsp3736D736EgaCgaA33B.1.1.3020.006224
ORF1ab/nsp3736D736DgaCgaT33B.1.1.4160.002715
ORF1ab/nsp3736D736DgaCgaT33B.1.1.4480.006098
ORF1ab/nsp3736D736DgaCgaT33B.1.1.4530.025424
ORF1ab/nsp3736D736DgaCgaT33B.1.1.4620.025862
ORF1ab/nsp3736D736DgaCgaT33B.1.1.5260.010638
ORF1ab/nsp3736D736DgaCgaT33B.1.1470.002268
ORF1ab/nsp3736D736DgaCgaT33B.1.177.700.017751
ORF1ab/nsp3736D736DgaCgaT33B.1.177.80.002257
ORF1ab/nsp3736D736DgaCgaT33B.1.258.170.000312
ORF1ab/nsp3736D736DgaCgaT33B.1.30.007853
ORF1ab/nsp3736D736NGacAac33B.1.3110.000824
ORF1ab/nsp3736D736DgaCgaT33B.1.3110.000824
ORF1ab/nsp3736D736YGacTac33B.1.360.000438
ORF1ab/nsp3736D736YGacTac33B.1.4000.001287
ORF1ab/nsp3736D736GgAcgGc33B.1.4130.012766
ORF1ab/nsp3736D736DgaCgaT33B.1.4700.004213
ORF1ab/nsp3736D736DgaCgaT33B.1.5240.004219
ORF1ab/nsp3736D736DgaCgaT33B.1.5270.011111
ORF1ab/nsp3736D736DgaCgaT33B.1.5640.001278
ORF1ab/nsp3736D736DgaCgaT33B.1.5760.00272
ORF1ab/nsp3736D736DgaCgaT33B.1.617.10.000387
ORF1ab/nsp3736D736DgaCgaT33B.1.6190.002613
ORF1ab/nsp3736D736DgaCgaT33N.100.088235
ORF1ab/nsp3736D736GgAcgGc33P.1.150.000697
ORF1ab/nsp3736D736GgAcgGc33P.50.041096
ORF1ab/nsp3736D736DgaCgaT33Q.10.000379
ORF1ab/nsp3736D736DgaCgaT33Q.80.000495
ORF1ab/nsp3736D736DgaCgaT33U.20.026316
ORF1ab/nsp3736D736AgACgCA220.111111
ORF1ab/nsp3736D736EgaCgaA220.111111
ORF1ab/nsp3736D736XGaCTaA22All0
ORF1ab/nsp3736D736KGaCAaA22All0
ORF1ab/nsp3736D736del2gACg--12All0
ORF1ab/nsp3736D736del1gAcg-c12All0
ORF1ab/nsp3736D736RGACCGT12All0
ORF1ab/nsp3736D736RGACAGA12All0
ORF1ab/nsp3736D736del2GAc--c12All0
ORF1ab/nsp3736D736del1gaCga-12All0
ORF1ab/nsp3736D736DgaCgaT22AY.100.00106
ORF1ab/nsp3736D736HGacCac22AY.1030.000012
ORF1ab/nsp3736D736DgaCgaT22AY.1200.000074
ORF1ab/nsp3736D736DgaCgaT22AY.240.000862
ORF1ab/nsp3736D736EgaCgaA22AY.260.000057
ORF1ab/nsp3736D736AgAcgCc22AY.30.00002
ORF1ab/nsp3736D736DgaCgaT22AY.300.000791
ORF1ab/nsp3736D736GgAcgGc22AY.390.000049
ORF1ab/nsp3736D736delGAC---22AY.40.000003
ORF1ab/nsp3736D736DgaCgaT22AY.400.001929
ORF1ab/nsp3736D736EgaCgaA22AY.440.000012
ORF1ab/nsp3736D736DgaCgaT22AY.46.20.001271
ORF1ab/nsp3736D736YGacTac22AY.50.000041
ORF1ab/nsp3736D736DgaCgaT22AY.670.000929
ORF1ab/nsp3736D736DgaCgaT22AY.930.000546
ORF1ab/nsp3736D736YGacTac22AY.980.000158
ORF1ab/nsp3736D736DgaCgaT22AY.980.000158
ORF1ab/nsp3736D736DgaCgaT22AY.99.10.003106
ORF1ab/nsp3736D736XGaCTaA22B.1.10.000036
ORF1ab/nsp3736D736SGACTCT12B.1.10.000018
ORF1ab/nsp3736D736AgACgCA12B.1.10.000018
ORF1ab/nsp3736D736AgACgCT12B.1.10.000018
ORF1ab/nsp3736D736SGACTCA12B.1.10.000018
ORF1ab/nsp3736D736DgaCgaT22B.1.1.1390.045455
ORF1ab/nsp3736D736YGacTac22B.1.1.1890.003026
ORF1ab/nsp3736D736HGacCac22B.1.1.2630.003115
ORF1ab/nsp3736D736GgAcgGc22B.1.1.2940.002532
ORF1ab/nsp3736D736YGacTac22B.1.1.3060.000877
ORF1ab/nsp3736D736DgaCgaT22B.1.1.3180.000604
ORF1ab/nsp3736D736DgaCgaT22B.1.1.330.000842
ORF1ab/nsp3736D736DgaCgaT22B.1.1.3680.006173
ORF1ab/nsp3736D736GgAcgGc22B.1.1.3970.004505
ORF1ab/nsp3736D736DgaCgaT22B.1.1.4340.000697
ORF1ab/nsp3736D736NGacAac22B.1.1.5190.000079
ORF1ab/nsp3736D736AgAcgCc22B.1.1.5190.000079
ORF1ab/nsp3736D736GgAcgGc22B.1.1.5240.041667
ORF1ab/nsp3736D736HGacCac22B.1.1.70.000002
ORF1ab/nsp3736D736SGAcAGc22B.1.1.70.000002
ORF1ab/nsp3736D736del2gACg--12B.1.1.70.000001
ORF1ab/nsp3736D736del2GAc--c12B.1.1.70.000001
ORF1ab/nsp3736D736DgaCgaT22B.1.1110.00235
ORF1ab/nsp3736D736DgaCgaT22B.1.160.160.001859
ORF1ab/nsp3736D736EgaCgaG22B.1.20.000018
ORF1ab/nsp3736D736YGacTac22B.1.2340.000264
ORF1ab/nsp3736D736YGacTac22B.1.2400.000431
ORF1ab/nsp3736D736DgaCgaT22B.1.2400.000431
ORF1ab/nsp3736D736YGacTac22B.1.2580.000133
ORF1ab/nsp3736D736DgaCgaT22B.1.258.110.000793
ORF1ab/nsp3736D736DgaCgaT22B.1.258.30.00335
ORF1ab/nsp3736D736DgaCgaT22B.1.2790.001027
ORF1ab/nsp3736D736DgaCgaT22B.1.2800.014286
ORF1ab/nsp3736D736DgaCgaT22B.1.3320.006993
ORF1ab/nsp3736D736DgaCgaT22B.1.3400.008584
ORF1ab/nsp3736D736delGAC---22B.1.360.000292
ORF1ab/nsp3736D736DgaCgaT22B.1.4250.005988
ORF1ab/nsp3736D736YGacTac22B.1.4290.000047
ORF1ab/nsp3736D736DgaCgaT22B.1.466.20.000782
ORF1ab/nsp3736D736DgaCgaT22B.1.5370.04
ORF1ab/nsp3736D736DgaCgaT22B.1.5750.000607
ORF1ab/nsp3736D736DgaCgaT22B.1.5820.000981
ORF1ab/nsp3736D736delGAC---22B.1.617.20.000008
ORF1ab/nsp3736D736AgAcgCc22B.1.617.20.000008
ORF1ab/nsp3736D736delGAC---22B.1.6190.001742
ORF1ab/nsp3736D736DgaCgaT22B.1.621.10.001012
ORF1ab/nsp3736D736DgaCgaT22C.160.002121
ORF1ab/nsp3736D736GgAcgGc22C.360.001821
ORF1ab/nsp3736D736DgaCgaT22D.20.00015
ORF1ab/nsp3736D736DgaCgaT22P.1.120.000968
ORF1ab/nsp3736D736EgaCgaA22P.1.40.001953
ORF1ab/nsp3736D736delGAC---11A0.000387
ORF1ab/nsp3736D736DgaCgaT11A.10.000282
ORF1ab/nsp3736D736delGAC---11A.2.20.001689
ORF1ab/nsp3736D736DgaCgaT11A.2.30.004739
ORF1ab/nsp3736D736YGacTac11A.2.50.000499
ORF1ab/nsp3736D736DgaCgaT11A.2.50.000499
ORF1ab/nsp3736D736DgaCgaT11A.2.5.10.004808
ORF1ab/nsp3736D736DgaCgaT11A.2.5.20.001572
ORF1ab/nsp3736D736DgaCgaT11AE.80.000489
ORF1ab/nsp3736D736GgAcgGc11AY.1000.000046
ORF1ab/nsp3736D736YGacTac11AY.1010.00049
ORF1ab/nsp3736D736DgaCgaT11AY.1010.00049
ORF1ab/nsp3736D736GgAcgGc11AY.1020.000027
ORF1ab/nsp3736D736DgaCgaT11AY.1040.001984
ORF1ab/nsp3736D736YGacTac11AY.1060.000335
ORF1ab/nsp3736D736DgaCgaT11AY.1060.000335
ORF1ab/nsp3736D736DgaCgaT11AY.1070.000466
ORF1ab/nsp3736D736YGacTac11AY.1110.000183
ORF1ab/nsp3736D736DgaCgaT11AY.1110.000183
ORF1ab/nsp3736D736AgAcgCc11AY.1210.000135
ORF1ab/nsp3736D736DgaCgaT11AY.130.000161
ORF1ab/nsp3736D736GgAcgGc11AY.200.000039
ORF1ab/nsp3736D736delGAC---11AY.250.000006
ORF1ab/nsp3736D736NGacAac11AY.260.000028
ORF1ab/nsp3736D736YGacTac11AY.270.000065
ORF1ab/nsp3736D736delGAC---11AY.30.00001
ORF1ab/nsp3736D736GgAcgGc11AY.3.10.000085
ORF1ab/nsp3736D736EgaCgaA11AY.340.000097
ORF1ab/nsp3736D736DgaCgaT11AY.34.10.00051
ORF1ab/nsp3736D736DgaCgaT11AY.350.000233
ORF1ab/nsp3736D736DgaCgaT11AY.380.000499
ORF1ab/nsp3736D736EgaCgaA11AY.390.000025
ORF1ab/nsp3736D736DgaCgaT11AY.4.10.000737
ORF1ab/nsp3736D736DgaCgaT11AY.410.000294
ORF1ab/nsp3736D736DgaCgaT11AY.420.00004
ORF1ab/nsp3736D736NGacAac11AY.430.000004
ORF1ab/nsp3736D736EgaCgaA11AY.430.000004
ORF1ab/nsp3736D736RGACAGA11AY.440.000006
ORF1ab/nsp3736D736VgACgTT11AY.440.000006
ORF1ab/nsp3736D736IGACATT11AY.440.000006
ORF1ab/nsp3736D736KGaCAaA11AY.440.000006
ORF1ab/nsp3736D736YGacTac11AY.46.60.000072
ORF1ab/nsp3736D736YGacTac11AY.470.000031
ORF1ab/nsp3736D736YGacTac11AY.480.000465
ORF1ab/nsp3736D736DgaCgaT11AY.480.000465
ORF1ab/nsp3736D736GgAcgGc11AY.510.000909
ORF1ab/nsp3736D736YGacTac11AY.540.000095
ORF1ab/nsp3736D736YGacTac11AY.550.000917
ORF1ab/nsp3736D736DgaCgaT11AY.550.000917
ORF1ab/nsp3736D736YGacTac11AY.60.000041
ORF1ab/nsp3736D736KGaCAaA11AY.620.000436
ORF1ab/nsp3736D736DgaCgaT11AY.630.000387
ORF1ab/nsp3736D736delGAC---11AY.670.000464
ORF1ab/nsp3736D736DgaCgaT11AY.690.000187
ORF1ab/nsp3736D736AgAcgCc11AY.70.000196
ORF1ab/nsp3736D736DgaCgaT11AY.70.000196
ORF1ab/nsp3736D736DgaCgaT11AY.710.000475
ORF1ab/nsp3736D736YGacTac11AY.710.000475
ORF1ab/nsp3736D736GgAcgGc11AY.750.000056
ORF1ab/nsp3736D736YGacTac11AY.780.001541
ORF1ab/nsp3736D736RGACCGT11AY.820.001357
ORF1ab/nsp3736D736DgaCgaT11AY.830.001724
ORF1ab/nsp3736D736DgaCgaT11AY.850.000427
ORF1ab/nsp3736D736DgaCgaT11AY.90.000068
ORF1ab/nsp3736D736YGacTac11AY.90.000068
ORF1ab/nsp3736D736AgAcgCc11AY.90.000068
ORF1ab/nsp3736D736YGacTac11AY.9.20.000037
ORF1ab/nsp3736D736YGacTac11AY.930.000273
ORF1ab/nsp3736D736DgaCgaT11AY.940.000443
ORF1ab/nsp3736D736delGAC---11AY.940.000443
ORF1ab/nsp3736D736DgaCgaT11AY.960.002075
ORF1ab/nsp3736D736AgAcgCc11AY.980.000079
ORF1ab/nsp3736D736NGacAac11AY.98.10.000048
ORF1ab/nsp3736D736delGAC---11AY.990.001049
ORF1ab/nsp3736D736NGaCAaT11AY.99.20.000092
ORF1ab/nsp3736D736NGaCAaT11B0.000128
ORF1ab/nsp3736D736delGAC---11B.10.000009
ORF1ab/nsp3736D736TGAcACc11B.10.000009
ORF1ab/nsp3736D736del1gAcg-c11B.10.000009
ORF1ab/nsp3736D736AgAcgCc11B.10.000009
ORF1ab/nsp3736D736NGacAac11B.1.10.000018
ORF1ab/nsp3736D736GgAcgGc11B.1.10.000018
ORF1ab/nsp3736D736DgaCgaT11B.1.1.100.001115
ORF1ab/nsp3736D736DgaCgaT11B.1.1.120.007463
ORF1ab/nsp3736D736delGAC---11B.1.1.1390.022727
ORF1ab/nsp3736D736delGAC---11B.1.1.1420.017544
ORF1ab/nsp3736D736DgaCgaT11B.1.1.1530.001095
ORF1ab/nsp3736D736DgaCgaT11B.1.1.160.055556
ORF1ab/nsp3736D736HGacCac11B.1.1.1710.003676
ORF1ab/nsp3736D736DgaCgaT11B.1.1.1760.000439
ORF1ab/nsp3736D736DgaCgaT11B.1.1.1890.001513
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2270.004348
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2370.005405
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2400.004695
ORF1ab/nsp3736D736AgAcgCc11B.1.1.250.000569
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2530.002506
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2540.011236
ORF1ab/nsp3736D736NGacAac11B.1.1.2580.003257
ORF1ab/nsp3736D736DgaCgaT11B.1.1.270.00565
ORF1ab/nsp3736D736NGacAac11B.1.1.2840.000107
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2880.001916
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2910.000742
ORF1ab/nsp3736D736DgaCgaT11B.1.1.2980.000862
ORF1ab/nsp3736D736DgaCgaT11B.1.1.3060.000438
ORF1ab/nsp3736D736DgaCgaT11B.1.1.3150.008475
ORF1ab/nsp3736D736YGacTac11B.1.1.3350.012987
ORF1ab/nsp3736D736DgaCgaT11B.1.1.370.000193
ORF1ab/nsp3736D736DgaCgaT11B.1.1.3750.011905
ORF1ab/nsp3736D736DgaCgaT11B.1.1.390.00051
ORF1ab/nsp3736D736delGAC---11B.1.1.4090.002833
ORF1ab/nsp3736D736DgaCgaT11B.1.1.4170.002703
ORF1ab/nsp3736D736YGacTac11B.1.1.5180.006329
ORF1ab/nsp3736D736GgAcgGc11B.1.1.5190.00004
ORF1ab/nsp3736D736EgaCgaA11B.1.1.5190.00004
ORF1ab/nsp3736D736YGacTac11B.1.1.5190.00004
ORF1ab/nsp3736D736AgACgCT11B.1.1.5210.005348
ORF1ab/nsp3736D736YGaCTaT11B.1.1.5210.005348
ORF1ab/nsp3736D736VgACgTG11B.1.1.70.000001
ORF1ab/nsp3736D736DgaCgaT11B.1.110.30.000718
ORF1ab/nsp3736D736NGacAac11B.1.1110.001175
ORF1ab/nsp3736D736VgAcgTc11B.1.1390.000733
ORF1ab/nsp3736D736delGAC---11B.1.1570.002985
ORF1ab/nsp3736D736delGAC---11B.1.1600.000031
ORF1ab/nsp3736D736NGacAac11B.1.1600.000031
ORF1ab/nsp3736D736DgaCgaT11B.1.160.290.004219
ORF1ab/nsp3736D736GgAcgGc11B.1.1770.000013
ORF1ab/nsp3736D736EgaCgaA11B.1.1770.000013
ORF1ab/nsp3736D736DgaCgaT11B.1.177.320.00135
ORF1ab/nsp3736D736DgaCgaT11B.1.177.340.052632
ORF1ab/nsp3736D736DgaCgaT11B.1.177.440.000519
ORF1ab/nsp3736D736HGacCac11B.1.177.440.000519
ORF1ab/nsp3736D736DgaCgaT11B.1.177.500.004695
ORF1ab/nsp3736D736delGAC---11B.1.177.500.004695
ORF1ab/nsp3736D736delGAC---11B.1.177.540.000606
ORF1ab/nsp3736D736HGacCac11B.1.177.560.000668
ORF1ab/nsp3736D736NGacAac11B.1.177.570.000281
ORF1ab/nsp3736D736NGacAac11B.1.177.600.000218
ORF1ab/nsp3736D736DgaCgaT11B.1.177.610.043478
ORF1ab/nsp3736D736delGAC---11B.1.177.630.002703
ORF1ab/nsp3736D736DgaCgaT11B.1.177.650.000665
ORF1ab/nsp3736D736YGacTac11B.1.177.720.00339
ORF1ab/nsp3736D736DgaCgaT11B.1.177.790.002342
ORF1ab/nsp3736D736DgaCgaT11B.1.177.830.001481
ORF1ab/nsp3736D736GgAcgGc11B.1.177.860.000183
ORF1ab/nsp3736D736YGacTac11B.1.177.860.000183
ORF1ab/nsp3736D736delGAC---11B.1.177.870.000728
ORF1ab/nsp3736D736DgaCgaT11B.1.1870.033333
ORF1ab/nsp3736D736DgaCgaT11B.1.1890.004292
ORF1ab/nsp3736D736DgaCgaT11B.1.1950.005025
ORF1ab/nsp3736D736YGacTac11B.1.1990.004132
ORF1ab/nsp3736D736NGacAac11B.1.20.000009
ORF1ab/nsp3736D736GgAcgGc11B.1.20.000009
ORF1ab/nsp3736D736DgaCgaT11B.1.2060.000816
ORF1ab/nsp3736D736delGAC---11B.1.2100.002132
ORF1ab/nsp3736D736YGacTac11B.1.214.20.0006
ORF1ab/nsp3736D736GgAcgGc11B.1.2210.000071
ORF1ab/nsp3736D736YGacTac11B.1.2210.000071
ORF1ab/nsp3736D736DgaCgaT11B.1.2320.000537
ORF1ab/nsp3736D736GgAcgGc11B.1.2320.000537
ORF1ab/nsp3736D736del1gaCga-11B.1.2320.000537
ORF1ab/nsp3736D736DgaCgaT11B.1.2370.004975
ORF1ab/nsp3736D736NGacAac11B.1.2520.006623
ORF1ab/nsp3736D736DgaCgaT11B.1.258.220.002667
ORF1ab/nsp3736D736DgaCgaT11B.1.258.240.010753
ORF1ab/nsp3736D736DgaCgaT11B.1.2810.021739
ORF1ab/nsp3736D736YGacTac11B.1.3100.047619
ORF1ab/nsp3736D736YGacTac11B.1.3110.000275
ORF1ab/nsp3736D736delGAC---11B.1.3190.003049
ORF1ab/nsp3736D736DgaCgaT11B.1.3200.001245
ORF1ab/nsp3736D736GgAcgGc11B.1.3360.002439
ORF1ab/nsp3736D736NGacAac11B.1.3510.00003
ORF1ab/nsp3736D736GgAcgGc11B.1.3510.00003
ORF1ab/nsp3736D736DgaCgaT11B.1.36.160.001425
ORF1ab/nsp3736D736NGacAac11B.1.36.170.000494
ORF1ab/nsp3736D736NGacAac11B.1.36.290.000517
ORF1ab/nsp3736D736YGacTac11B.1.36.390.002217
ORF1ab/nsp3736D736DgaCgaT11B.1.36.80.001
ORF1ab/nsp3736D736YGacTac11B.1.3620.001541
ORF1ab/nsp3736D736DgaCgaT11B.1.3690.000285
ORF1ab/nsp3736D736DgaCgaT11B.1.3820.008929
ORF1ab/nsp3736D736DgaCgaT11B.1.4040.001302
ORF1ab/nsp3736D736delGAC---11B.1.4090.000781
ORF1ab/nsp3736D736TGAcACc11B.1.4150.014286
ORF1ab/nsp3736D736DgaCgaT11B.1.4220.000812
ORF1ab/nsp3736D736AgAcgCc11B.1.4270.00005
ORF1ab/nsp3736D736AgAcgCc11B.1.4280.00102
ORF1ab/nsp3736D736NGacAac11B.1.4290.000024
ORF1ab/nsp3736D736HGacCac11B.1.4620.007246
ORF1ab/nsp3736D736DgaCgaT11B.1.4800.002488
ORF1ab/nsp3736D736DgaCgaT11B.1.5000.052632
ORF1ab/nsp3736D736DgaCgaT11B.1.5250.000113
ORF1ab/nsp3736D736AgAcgCc11B.1.5260.000024
ORF1ab/nsp3736D736YGacTac11B.1.5260.000024
ORF1ab/nsp3736D736DgaCgaT11B.1.5330.009615
ORF1ab/nsp3736D736DgaCgaT11B.1.5480.035714
ORF1ab/nsp3736D736DgaCgaT11B.1.5610.000397
ORF1ab/nsp3736D736DgaCgaT11B.1.5670.003333
ORF1ab/nsp3736D736AgAcgCc11B.1.5760.000907
ORF1ab/nsp3736D736DgaCgaT11B.1.5770.000687
ORF1ab/nsp3736D736DgaCgaT11B.1.5880.00091
ORF1ab/nsp3736D736YGacTac11B.1.5960.000087
ORF1ab/nsp3736D736HGacCac11B.1.5960.000087
ORF1ab/nsp3736D736AgAcgCc11B.1.5960.000087
ORF1ab/nsp3736D736DgaCgaT11B.1.6090.000479
ORF1ab/nsp3736D736DgaCgaT11B.1.6120.002653
ORF1ab/nsp3736D736delGAC---11B.1.617.10.000129
ORF1ab/nsp3736D736TGAcACc11B.1.617.20.000004
ORF1ab/nsp3736D736DgaCgaT11B.1.6230.000536
ORF1ab/nsp3736D736DgaCgaT11B.1.6250.002353
ORF1ab/nsp3736D736DgaCgaT11B.1.6270.00202
ORF1ab/nsp3736D736DgaCgaT11B.1.9.50.005682
ORF1ab/nsp3736D736delGAC---11B.150.017544
ORF1ab/nsp3736D736GgAcgGc11C.300.001727
ORF1ab/nsp3736D736DgaCgaT11C.350.000774
ORF1ab/nsp3736D736YGacTac11C.370.000116
ORF1ab/nsp3736D736DgaCgaT11C.40.01
ORF1ab/nsp3736D736GgAcgGc11C.40.01
ORF1ab/nsp3736D736HGacCac11D.20.000075
ORF1ab/nsp3736D736DgaCgaT11N.50.001767
ORF1ab/nsp3736D736delGAC---11P.10.000016
ORF1ab/nsp3736D736NGacAac11P.10.000016
ORF1ab/nsp3736D736DgaCgaT11P.1.10.000318
ORF1ab/nsp3736D736YGacTac11P.1.150.000232
ORF1ab/nsp3736D736NGacAac11P.1.160.000374
ORF1ab/nsp3736D736DgaCgaT11P.1.20.001156
ORF1ab/nsp3736D736DgaCgaT11W.40.001351
ORF1ab/nsp3736D736DgaCgaT11Z.10.00289