CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 730

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3730G730SG1548SnonsynGgtAgt106410630.999064907-4909
ORF1ab/nsp3730G730SG1548SnonsynGGtTCt106410.000939854907-4909
ORF1ab/nsp3730G730DG1548DnonsyngGtgAt3403390.9970594907-4909
ORF1ab/nsp3730G730DG1548DnonsyngGTgAC34010.002941184907-4909
ORF1ab/nsp3730G730GG1548GsynggTggC1531470.9607844907-4909
ORF1ab/nsp3730G730GG1548GsynggTggA15340.02614384907-4909
ORF1ab/nsp3730G730GG1548GsynggTggG15320.01307194907-4909
ORF1ab/nsp3730G730CG1548CnonsynGgtTgt10810814907-4909
ORF1ab/nsp3730G730delG1548deldelGGT---848414907-4909
ORF1ab/nsp3730G730VG1548VnonsyngGtgTt545414907-4909
ORF1ab/nsp3730G730RG1548RnonsynGgtCgt650.8333334907-4909
ORF1ab/nsp3730G730RG1548RnonsynGgTAgA610.1666674907-4909
ORF1ab/nsp3730G730AG1548AnonsyngGtgCt4414907-4909
ORF1ab/nsp3730G730del1G1548del1delGgt-gt430.754907-4909
ORF1ab/nsp3730G730del1G1548del1delggTgg-410.254907-4909
ORF1ab/nsp3730G730NG1548NnonsynGGTAAC2214907-4909
ORF1ab/nsp3730G730LG1548LnonsynGGtCTt1114907-4909
ORF1ab/nsp3730G730HG1548HnonsynGGtCAt1114907-4909

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3730G730SGgtAgt10631064All0.000203
ORF1ab/nsp3730G730SGGtTCt11064All0
ORF1ab/nsp3730G730SGgtAgt690690AY.660.737968
ORF1ab/nsp3730G730DgGtgAt339340All0.000065
ORF1ab/nsp3730G730DgGTgAC1340All0
ORF1ab/nsp3730G730GggTggC147153All0.000028
ORF1ab/nsp3730G730GggTggA4153All0.000001
ORF1ab/nsp3730G730GggTggG2153All0
ORF1ab/nsp3730G730SGgtAgt111111B.1.1.5190.004408
ORF1ab/nsp3730G730CGgtTgt108108All0.000021
ORF1ab/nsp3730G730DgGtgAt100100B.1.1770.001317
ORF1ab/nsp3730G730delGGT---8484All0.000016
ORF1ab/nsp3730G730DgGtgAt6565B.1.1.70.000058
ORF1ab/nsp3730G730SGgtAgt5555B.1.177.800.105163
ORF1ab/nsp3730G730VgGtgTt5454All0.00001
ORF1ab/nsp3730G730SGgtAgt5252B.1.2210.003694
ORF1ab/nsp3730G730CGgtTgt4343B.1.177.200.06525
ORF1ab/nsp3730G730GggTggC3434B.1.20.000299
ORF1ab/nsp3730G730DgGtgAt3131AY.40.000048
ORF1ab/nsp3730G730VgGtgTt3030D.20.002251
ORF1ab/nsp3730G730GggTggC2828AY.250.000168
ORF1ab/nsp3730G730delGGT---2828B.1.1.70.000025
ORF1ab/nsp3730G730DgGtgAt2727AY.430.00012
ORF1ab/nsp3730G730CGgtTgt2020D.20.001501
ORF1ab/nsp3730G730GggTggC1919B.10.000174
ORF1ab/nsp3730G730SGgtAgt1818B.1.617.20.000068
ORF1ab/nsp3730G730DgGtgAt1516AY.440.000091
ORF1ab/nsp3730G730DgGTgAC116AY.440.000006
ORF1ab/nsp3730G730SGgtAgt1515AY.40.000023
ORF1ab/nsp3730G730SGgtAgt1515AY.46.50.002976
ORF1ab/nsp3730G730SGgtAgt1313B.1.1.70.000012
ORF1ab/nsp3730G730DgGtgAt1212B.10.00011
ORF1ab/nsp3730G730GggTggC1010AY.390.000247
ORF1ab/nsp3730G730DgGtgAt1010AY.750.00056
ORF1ab/nsp3730G730GggTggC1010B.1.1.4320.012658
ORF1ab/nsp3730G730DgGtgAt99AY.250.000054
ORF1ab/nsp3730G730GggTggC79B.1.1.70.000006
ORF1ab/nsp3730G730GggTggG29B.1.1.70.000002
ORF1ab/nsp3730G730GggTggC88AY.40.000012
ORF1ab/nsp3730G730SGgtAgt88AY.430.000035
ORF1ab/nsp3730G730CGgtTgt88AY.50.000165
ORF1ab/nsp3730G730SGgtAgt88B.1.20.00007
ORF1ab/nsp3730G730DgGtgAt88B.1.617.20.00003
ORF1ab/nsp3730G730CGgtTgt77AY.40.000011
ORF1ab/nsp3730G730RGgtCgt56All0.000001
ORF1ab/nsp3730G730RGgTAgA16All0
ORF1ab/nsp3730G730GggTggC66AY.50.000124
ORF1ab/nsp3730G730VgGtgTt66B.1.1.70.000005
ORF1ab/nsp3730G730SGgtAgt66B.1.2430.000418
ORF1ab/nsp3730G730SGgtAgt55AY.290.000079
ORF1ab/nsp3730G730DgGtgAt55AY.3.10.000426
ORF1ab/nsp3730G730SGgtAgt55AY.440.00003
ORF1ab/nsp3730G730GggTggC55AY.440.00003
ORF1ab/nsp3730G730delGGT---55B.1.617.20.000019
ORF1ab/nsp3730G730SGgtAgt55P.10.000079
ORF1ab/nsp3730G730DgGtgAt55P.10.000079
ORF1ab/nsp3730G730AgGtgCt44All0.000001
ORF1ab/nsp3730G730del1Ggt-gt34All0.000001
ORF1ab/nsp3730G730del1ggTgg-14All0
ORF1ab/nsp3730G730SGgtAgt44AY.250.000024
ORF1ab/nsp3730G730CGgtTgt44B.10.000037
ORF1ab/nsp3730G730SGgtAgt44B.10.000037
ORF1ab/nsp3730G730CGgtTgt44B.1.1.70.000004
ORF1ab/nsp3730G730delGGT---44B.1.1770.000053
ORF1ab/nsp3730G730DgGtgAt33AY.1020.00008
ORF1ab/nsp3730G730GggTggC33AY.3.10.000256
ORF1ab/nsp3730G730SGgtAgt33AY.320.001597
ORF1ab/nsp3730G730SGgtAgt33AY.370.000948
ORF1ab/nsp3730G730SGgtAgt33AY.390.000074
ORF1ab/nsp3730G730DgGtgAt33AY.4.20.000065
ORF1ab/nsp3730G730GggTggA23AY.430.000009
ORF1ab/nsp3730G730GggTggC13AY.430.000004
ORF1ab/nsp3730G730SGgtAgt33AY.50.000062
ORF1ab/nsp3730G730DgGtgAt33B.1.10.000054
ORF1ab/nsp3730G730DgGtgAt33B.1.20.000026
ORF1ab/nsp3730G730DgGtgAt33B.1.5950.000783
ORF1ab/nsp3730G730NGGTAAC220.111111
ORF1ab/nsp3730G730delGGT---220.111111
ORF1ab/nsp3730G730NGGTAAC22All0
ORF1ab/nsp3730G730DgGtgAt22AY.1000.000092
ORF1ab/nsp3730G730DgGtgAt22AY.1030.000012
ORF1ab/nsp3730G730SGgtAgt22AY.1030.000012
ORF1ab/nsp3730G730CGgtTgt22AY.1200.000074
ORF1ab/nsp3730G730CGgtTgt22AY.250.000012
ORF1ab/nsp3730G730SGgtAgt22AY.260.000057
ORF1ab/nsp3730G730SGgtAgt22AY.30.00002
ORF1ab/nsp3730G730VgGtgTt22AY.30.00002
ORF1ab/nsp3730G730DgGtgAt22AY.390.000049
ORF1ab/nsp3730G730delGGT---22AY.40.000003
ORF1ab/nsp3730G730CGgtTgt22AY.4.20.000043
ORF1ab/nsp3730G730delGGT---22AY.430.000009
ORF1ab/nsp3730G730DgGtgAt22AY.470.000062
ORF1ab/nsp3730G730DgGtgAt22AY.50.000041
ORF1ab/nsp3730G730SGgtAgt22AY.610.00021
ORF1ab/nsp3730G730delGGT---22AY.670.000929
ORF1ab/nsp3730G730AgGtgCt22AY.99.20.000184
ORF1ab/nsp3730G730delGGT---22B.10.000018
ORF1ab/nsp3730G730VgGtgTt22B.1.10.000036
ORF1ab/nsp3730G730CGgtTgt22B.1.10.000036
ORF1ab/nsp3730G730SGgtAgt22B.1.1600.000062
ORF1ab/nsp3730G730VgGtgTt22B.1.1770.000026
ORF1ab/nsp3730G730del1Ggt-gt12B.1.1770.000013
ORF1ab/nsp3730G730del1ggTgg-12B.1.1770.000013
ORF1ab/nsp3730G730VgGtgTt22B.1.20.000018
ORF1ab/nsp3730G730CGgtTgt22B.1.2650.002541
ORF1ab/nsp3730G730DgGtgAt22B.1.3400.008584
ORF1ab/nsp3730G730delGGT---22B.1.360.000292
ORF1ab/nsp3730G730DgGtgAt22B.1.4290.000047
ORF1ab/nsp3730G730delGGT---22B.1.6190.001742
ORF1ab/nsp3730G730GggTggC22B.1.6230.001073
ORF1ab/nsp3730G730SGgtAgt22B.1.6280.000705
ORF1ab/nsp3730G730SGgtAgt22B.1.6370.000146
ORF1ab/nsp3730G730delGGT---22P.10.000032
ORF1ab/nsp3730G730GggTggC22R.10.00018
ORF1ab/nsp3730G730delGGT---11A0.000387
ORF1ab/nsp3730G730delGGT---11A.2.20.001689
ORF1ab/nsp3730G730HGGtCAt11All0
ORF1ab/nsp3730G730LGGtCTt11All0
ORF1ab/nsp3730G730SGgtAgt11AU.20.002421
ORF1ab/nsp3730G730VgGtgTt11AY.1020.000027
ORF1ab/nsp3730G730GggTggC11AY.1030.000006
ORF1ab/nsp3730G730CGgtTgt11AY.1030.000006
ORF1ab/nsp3730G730delGGT---11AY.1030.000006
ORF1ab/nsp3730G730SGgtAgt11AY.1170.000085
ORF1ab/nsp3730G730SGgtAgt11AY.1200.000037
ORF1ab/nsp3730G730SGgtAgt11AY.200.000039
ORF1ab/nsp3730G730CGgtTgt11AY.200.000039
ORF1ab/nsp3730G730DgGtgAt11AY.200.000039
ORF1ab/nsp3730G730delGGT---11AY.250.000006
ORF1ab/nsp3730G730CGgtTgt11AY.260.000028
ORF1ab/nsp3730G730GggTggC11AY.290.000016
ORF1ab/nsp3730G730DgGtgAt11AY.290.000016
ORF1ab/nsp3730G730DgGtgAt11AY.30.00001
ORF1ab/nsp3730G730delGGT---11AY.30.00001
ORF1ab/nsp3730G730SGgtAgt11AY.3.10.000085
ORF1ab/nsp3730G730GggTggC11AY.320.000532
ORF1ab/nsp3730G730GggTggC11AY.330.000067
ORF1ab/nsp3730G730CGgtTgt11AY.350.000233
ORF1ab/nsp3730G730DgGtgAt11AY.370.000316
ORF1ab/nsp3730G730SGgtAgt11AY.380.000499
ORF1ab/nsp3730G730DgGtgAt11AY.39.10.00004
ORF1ab/nsp3730G730VgGtgTt11AY.39.10.00004
ORF1ab/nsp3730G730SGgtAgt11AY.39.10.00004
ORF1ab/nsp3730G730DgGtgAt11AY.4.40.000409
ORF1ab/nsp3730G730delGGT---11AY.4.50.000107
ORF1ab/nsp3730G730SGgtAgt11AY.460.000104
ORF1ab/nsp3730G730DgGtgAt11AY.46.60.000072
ORF1ab/nsp3730G730SGgtAgt11AY.470.000031
ORF1ab/nsp3730G730VgGtgTt11AY.470.000031
ORF1ab/nsp3730G730RGgTAgA11AY.620.000436
ORF1ab/nsp3730G730SGgtAgt11AY.690.000187
ORF1ab/nsp3730G730SGgtAgt11AY.75.10.00018
ORF1ab/nsp3730G730DgGtgAt11AY.840.000437
ORF1ab/nsp3730G730SGgtAgt11AY.870.000833
ORF1ab/nsp3730G730DgGtgAt11AY.910.00073
ORF1ab/nsp3730G730delGGT---11AY.940.000443
ORF1ab/nsp3730G730SGgtAgt11AY.980.000079
ORF1ab/nsp3730G730DgGtgAt11AY.98.10.000048
ORF1ab/nsp3730G730delGGT---11AY.990.001049
ORF1ab/nsp3730G730DgGtgAt11AY.99.20.000092
ORF1ab/nsp3730G730DgGtgAt11B0.000128
ORF1ab/nsp3730G730SGgtAgt11B0.000128
ORF1ab/nsp3730G730AgGtgCt11B.10.000009
ORF1ab/nsp3730G730del1Ggt-gt11B.10.000009
ORF1ab/nsp3730G730RGgtCgt11B.10.000009
ORF1ab/nsp3730G730VgGtgTt11B.10.000009
ORF1ab/nsp3730G730RGgtCgt11B.1.10.000018
ORF1ab/nsp3730G730LGGtCTt11B.1.10.000018
ORF1ab/nsp3730G730delGGT---11B.1.10.000018
ORF1ab/nsp3730G730SGgtAgt11B.1.10.000018
ORF1ab/nsp3730G730delGGT---11B.1.1.1390.022727
ORF1ab/nsp3730G730delGGT---11B.1.1.1420.017544
ORF1ab/nsp3730G730SGgtAgt11B.1.1.3110.000358
ORF1ab/nsp3730G730SGgtAgt11B.1.1.3170.000412
ORF1ab/nsp3730G730DgGtgAt11B.1.1.330.000421
ORF1ab/nsp3730G730RGgtCgt11B.1.1.370.000193
ORF1ab/nsp3730G730SGGtTCt11B.1.1.3710.010417
ORF1ab/nsp3730G730delGGT---11B.1.1.4090.002833
ORF1ab/nsp3730G730RGgtCgt11B.1.1.70.000001
ORF1ab/nsp3730G730HGGtCAt11B.1.1.70.000001
ORF1ab/nsp3730G730CGgtTgt11B.1.1.700.000341
ORF1ab/nsp3730G730DgGtgAt11B.1.1.700.000341
ORF1ab/nsp3730G730CGgtTgt11B.1.1110.001175
ORF1ab/nsp3730G730delGGT---11B.1.1570.002985
ORF1ab/nsp3730G730DgGtgAt11B.1.1600.000031
ORF1ab/nsp3730G730GggTggC11B.1.1600.000031
ORF1ab/nsp3730G730delGGT---11B.1.1600.000031
ORF1ab/nsp3730G730GggTggC11B.1.160.160.000929
ORF1ab/nsp3730G730DgGtgAt11B.1.160.300.002976
ORF1ab/nsp3730G730GggTggC11B.1.1770.000013
ORF1ab/nsp3730G730delGGT---11B.1.177.160.000664
ORF1ab/nsp3730G730VgGtgTt11B.1.177.160.000664
ORF1ab/nsp3730G730delGGT---11B.1.177.170.000821
ORF1ab/nsp3730G730delGGT---11B.1.177.500.004695
ORF1ab/nsp3730G730delGGT---11B.1.177.540.000606
ORF1ab/nsp3730G730VgGtgTt11B.1.177.560.000668
ORF1ab/nsp3730G730delGGT---11B.1.177.630.002703
ORF1ab/nsp3730G730delGGT---11B.1.177.830.001481
ORF1ab/nsp3730G730delGGT---11B.1.177.870.000728
ORF1ab/nsp3730G730delGGT---11B.1.20.000009
ORF1ab/nsp3730G730CGgtTgt11B.1.20.000009
ORF1ab/nsp3730G730RGgtCgt11B.1.20.000009
ORF1ab/nsp3730G730delGGT---11B.1.2100.002132
ORF1ab/nsp3730G730delGGT---11B.1.2210.000071
ORF1ab/nsp3730G730GggTggA11B.1.221.10.002907
ORF1ab/nsp3730G730CGgtTgt11B.1.2340.000132
ORF1ab/nsp3730G730SGgtAgt11B.1.2340.000132
ORF1ab/nsp3730G730DgGtgAt11B.1.2340.000132
ORF1ab/nsp3730G730SGgtAgt11B.1.2580.000067
ORF1ab/nsp3730G730GggTggC11B.1.3110.000275
ORF1ab/nsp3730G730delGGT---11B.1.3190.003049
ORF1ab/nsp3730G730DgGtgAt11B.1.3510.00003
ORF1ab/nsp3730G730GggTggC11B.1.360.000146
ORF1ab/nsp3730G730delGGT---11B.1.4090.000781
ORF1ab/nsp3730G730delGGT---11B.1.4150.014286
ORF1ab/nsp3730G730CGgtTgt11B.1.4270.00005
ORF1ab/nsp3730G730GggTggC11B.1.4270.00005
ORF1ab/nsp3730G730VgGtgTt11B.1.4290.000024
ORF1ab/nsp3730G730VgGtgTt11B.1.4340.052632
ORF1ab/nsp3730G730VgGtgTt11B.1.4380.006536
ORF1ab/nsp3730G730CGgtTgt11B.1.4800.002488
ORF1ab/nsp3730G730SGgtAgt11B.1.4990.00105
ORF1ab/nsp3730G730SGgtAgt11B.1.5250.000113
ORF1ab/nsp3730G730GggTggC11B.1.5260.000024
ORF1ab/nsp3730G730CGgtTgt11B.1.5600.00463
ORF1ab/nsp3730G730DgGtgAt11B.1.5900.004545
ORF1ab/nsp3730G730delGGT---11B.1.617.10.000129
ORF1ab/nsp3730G730DgGtgAt11B.1.617.10.000129
ORF1ab/nsp3730G730CGgtTgt11B.1.617.20.000004
ORF1ab/nsp3730G730GggTggA11B.1.619.10.000641
ORF1ab/nsp3730G730AgGtgCt11B.1.619.10.000641
ORF1ab/nsp3730G730DgGtgAt11B.1.6210.000089
ORF1ab/nsp3730G730GggTggC11B.1.780.008547
ORF1ab/nsp3730G730delGGT---11B.150.017544
ORF1ab/nsp3730G730DgGtgAt11C.370.000116
ORF1ab/nsp3730G730DgGtgAt11D.20.000075
ORF1ab/nsp3730G730del1Ggt-gt11D.20.000075
ORF1ab/nsp3730G730VgGtgTt11D.30.005917
ORF1ab/nsp3730G730delGGT---11P.1.10.000318
ORF1ab/nsp3730G730SGgtAgt11P.1.150.000232
ORF1ab/nsp3730G730SGgtAgt11Q.10.000126
ORF1ab/nsp3730G730delGGT---11Q.20.000613