CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 73

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp373T73IT891InonsynaCaaTa3950395012936-2938
ORF1ab/nsp373T73AT891AnonsynAcaGca2312300.9956712936-2938
ORF1ab/nsp373T73AT891AnonsynAcAGcT23110.0043292936-2938
ORF1ab/nsp373T73TT891TsynacAacG86750.8720932936-2938
ORF1ab/nsp373T73TT891TsynacAacC8670.08139542936-2938
ORF1ab/nsp373T73TT891TsynacAacT8640.04651162936-2938
ORF1ab/nsp373T73delT891deldelACA---505012936-2938
ORF1ab/nsp373T73KT891KnonsynaCaaAa373712936-2938
ORF1ab/nsp373T73ST891SnonsynAcaTca950.5555562936-2938
ORF1ab/nsp373T73ST891SnonsynAcATcC930.3333332936-2938
ORF1ab/nsp373T73ST891SnonsynaCAaGC910.1111112936-2938
ORF1ab/nsp373T73PT891PnonsynAcaCca5512936-2938
ORF1ab/nsp373T73NT891NnonsynaCAaAC4412936-2938
ORF1ab/nsp373T73del2T891del2delACa--a4412936-2938
ORF1ab/nsp373T73del1T891del1delacAac-430.752936-2938
ORF1ab/nsp373T73del1T891del1delAca-ca410.252936-2938
ORF1ab/nsp373T73XT891XnonsynACaTAa3312936-2938
ORF1ab/nsp373T73MT891MnonsynaCAaTG3312936-2938
ORF1ab/nsp373T73YT891YnonsynACATAC3312936-2938
ORF1ab/nsp373T73RT891RnonsynaCaaGa320.6666672936-2938
ORF1ab/nsp373T73VT891VnonsynACAGTC320.6666672936-2938
ORF1ab/nsp373T73RT891RnonsynaCAaGG310.3333332936-2938
ORF1ab/nsp373T73VT891VnonsynACAGTG310.3333332936-2938
ORF1ab/nsp373T73GT891GnonsynACAGGT1112936-2938

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp373T73IaCaaTa39503950All0.000755
ORF1ab/nsp373T73IaCaaTa746746B.1.1.70.000668
ORF1ab/nsp373T73IaCaaTa498498P.10.007845
ORF1ab/nsp373T73IaCaaTa333333AY.430.001475
ORF1ab/nsp373T73IaCaaTa302302B.1.617.20.001137
ORF1ab/nsp373T73AAcaGca230231All0.000044
ORF1ab/nsp373T73AAcAGcT1231All0
ORF1ab/nsp373T73IaCaaTa203203B.1.20.001787
ORF1ab/nsp373T73IaCaaTa198198AY.40.000308
ORF1ab/nsp373T73IaCaaTa197197B.1.5610.078206
ORF1ab/nsp373T73IaCaaTa135135AY.440.000822
ORF1ab/nsp373T73IaCaaTa116116AY.30.001154
ORF1ab/nsp373T73IaCaaTa9797AY.1020.002572
ORF1ab/nsp373T73AAcaGca9797AY.250.000583
ORF1ab/nsp373T73IaCaaTa9595B.1.1600.002963
ORF1ab/nsp373T73TacAacG7586All0.000014
ORF1ab/nsp373T73TacAacC786All0.000001
ORF1ab/nsp373T73TacAacT486All0.000001
ORF1ab/nsp373T73IaCaaTa8585B.10.000779
ORF1ab/nsp373T73AAcaGca7070AY.40.000109
ORF1ab/nsp373T73IaCaaTa6767AY.9.10.00561
ORF1ab/nsp373T73delACA---5050All0.00001
ORF1ab/nsp373T73IaCaaTa4949AY.250.000295
ORF1ab/nsp373T73IaCaaTa4545B.1.2810.978261
ORF1ab/nsp373T73IaCaaTa4040AY.390.000988
ORF1ab/nsp373T73IaCaaTa4040B.1.1770.000527
ORF1ab/nsp373T73IaCaaTa4040B.1.258.30.067002
ORF1ab/nsp373T73KaCaaAa3737All0.000007
ORF1ab/nsp373T73IaCaaTa3030AY.1030.000186
ORF1ab/nsp373T73IaCaaTa3030AY.750.001681
ORF1ab/nsp373T73TacAacG2828AY.1180.001754
ORF1ab/nsp373T73IaCaaTa2626AY.260.000736
ORF1ab/nsp373T73IaCaaTa2121AY.50.000434
ORF1ab/nsp373T73IaCaaTa1919B.1.4970.00598
ORF1ab/nsp373T73IaCaaTa1616AY.1000.000736
ORF1ab/nsp373T73IaCaaTa1616AY.1200.000595
ORF1ab/nsp373T73IaCaaTa1616AY.330.001068
ORF1ab/nsp373T73IaCaaTa1616AY.4.20.000347
ORF1ab/nsp373T73IaCaaTa1616B.1.36.290.008277
ORF1ab/nsp373T73TacAacG1015B.1.1.70.000009
ORF1ab/nsp373T73TacAacT415B.1.1.70.000004
ORF1ab/nsp373T73TacAacC115B.1.1.70.000001
ORF1ab/nsp373T73IaCaaTa1414AY.60.000576
ORF1ab/nsp373T73IaCaaTa1313B.1.3510.000386
ORF1ab/nsp373T73IaCaaTa1212AY.9.20.000441
ORF1ab/nsp373T73IaCaaTa1212B.1.10.000218
ORF1ab/nsp373T73KaCaaAa1212B.1.1.5190.000477
ORF1ab/nsp373T73IaCaaTa1212B.1.110.30.008621
ORF1ab/nsp373T73IaCaaTa1212B.1.6280.004228
ORF1ab/nsp373T73delACA---1111B.1.1.70.00001
ORF1ab/nsp373T73IaCaaTa1010AY.270.000647
ORF1ab/nsp373T73SAcaTca59All0.000001
ORF1ab/nsp373T73SAcATcC39All0.000001
ORF1ab/nsp373T73SaCAaGC19All0
ORF1ab/nsp373T73IaCaaTa99AY.160.003417
ORF1ab/nsp373T73AAcaGca99B.1.1.280.002801
ORF1ab/nsp373T73IaCaaTa99B.1.1.5190.000357
ORF1ab/nsp373T73IaCaaTa99B.1.177.210.000688
ORF1ab/nsp373T73IaCaaTa99B.1.362.20.042453
ORF1ab/nsp373T73IaCaaTa99B.1.4270.000454
ORF1ab/nsp373T73IaCaaTa99C.370.001045
ORF1ab/nsp373T73IaCaaTa88AY.200.000311
ORF1ab/nsp373T73KaCaaAa88AY.40.000012
ORF1ab/nsp373T73IaCaaTa88AY.470.000249
ORF1ab/nsp373T73IaCaaTa88B.1.1.630.003086
ORF1ab/nsp373T73IaCaaTa88B.1.177.40.001688
ORF1ab/nsp373T73AAcaGca88B.1.617.20.00003
ORF1ab/nsp373T73IaCaaTa77AY.1170.000592
ORF1ab/nsp373T73IaCaaTa77B.1.5750.002124
ORF1ab/nsp373T73SAcaTca360.166667
ORF1ab/nsp373T73SAcATcC360.166667
ORF1ab/nsp373T73TacAacG66AY.430.000027
ORF1ab/nsp373T73IaCaaTa66AY.460.000624
ORF1ab/nsp373T73IaCaaTa66AY.730.003992
ORF1ab/nsp373T73IaCaaTa66B.1.177.750.006243
ORF1ab/nsp373T73PAcaCca55All0.000001
ORF1ab/nsp373T73IaCaaTa55AY.39.10.000198
ORF1ab/nsp373T73AAcaGca55B.1.1.70.000004
ORF1ab/nsp373T73IaCaaTa55B.1.2580.000333
ORF1ab/nsp373T73IaCaaTa55B.1.3560.008636
ORF1ab/nsp373T73IaCaaTa55B.1.360.00073
ORF1ab/nsp373T73IaCaaTa55B.1.4290.000118
ORF1ab/nsp373T73KaCaaAa55B.1.4290.000118
ORF1ab/nsp373T73IaCaaTa55B.1.4780.058824
ORF1ab/nsp373T73IaCaaTa55B.1.5260.000118
ORF1ab/nsp373T73IaCaaTa55B.1.6370.000365
ORF1ab/nsp373T73TacAacG55N.50.008834
ORF1ab/nsp373T73IaCaaTa55P.1.120.00242
ORF1ab/nsp373T73IaCaaTa55P.1.170.000809
ORF1ab/nsp373T73NaCAaAC44All0.000001
ORF1ab/nsp373T73del2ACa--a44All0.000001
ORF1ab/nsp373T73del1acAac-34All0.000001
ORF1ab/nsp373T73del1Aca-ca14All0
ORF1ab/nsp373T73AAcaGca44AY.1020.000106
ORF1ab/nsp373T73IaCaaTa44AY.1180.000251
ORF1ab/nsp373T73IaCaaTa44AY.230.000279
ORF1ab/nsp373T73IaCaaTa44AY.290.000063
ORF1ab/nsp373T73IaCaaTa44AY.420.000161
ORF1ab/nsp373T73AAcaGca44AY.440.000024
ORF1ab/nsp373T73IaCaaTa44AY.980.000316
ORF1ab/nsp373T73delACA---44B.10.000037
ORF1ab/nsp373T73AAcaGca44B.1.1.5190.000159
ORF1ab/nsp373T73IaCaaTa44B.1.2410.003247
ORF1ab/nsp373T73IaCaaTa44B.1.617.10.000516
ORF1ab/nsp373T73IaCaaTa44P.1.100.001078
ORF1ab/nsp373T73KaCaaAa330.166667
ORF1ab/nsp373T73NaCAaAC330.166667
ORF1ab/nsp373T73YACATAC330.166667
ORF1ab/nsp373T73XACaTAa330.166667
ORF1ab/nsp373T73TacAacC330.166667
ORF1ab/nsp373T73IaCaaTa33A.23.10.002113
ORF1ab/nsp373T73XACaTAa33All0.000001
ORF1ab/nsp373T73MaCAaTG33All0.000001
ORF1ab/nsp373T73YACATAC33All0.000001
ORF1ab/nsp373T73RaCaaGa23All0
ORF1ab/nsp373T73VACAGTC23All0
ORF1ab/nsp373T73RaCAaGG13All0
ORF1ab/nsp373T73VACAGTG13All0
ORF1ab/nsp373T73IaCaaTa33AY.1100.000338
ORF1ab/nsp373T73IaCaaTa33AY.1110.000549
ORF1ab/nsp373T73IaCaaTa33AY.130.000483
ORF1ab/nsp373T73IaCaaTa33AY.4.50.000322
ORF1ab/nsp373T73del2ACa--a33AY.440.000018
ORF1ab/nsp373T73IaCaaTa33AY.450.000365
ORF1ab/nsp373T73AAcaGca33AY.50.000062
ORF1ab/nsp373T73IaCaaTa33AY.570.001969
ORF1ab/nsp373T73AAcaGca33AY.60.000123
ORF1ab/nsp373T73IaCaaTa33AY.610.000314
ORF1ab/nsp373T73IaCaaTa33AY.740.000347
ORF1ab/nsp373T73IaCaaTa33AY.98.10.000145
ORF1ab/nsp373T73delACA---33B.1.1.330.001263
ORF1ab/nsp373T73IaCaaTa33B.1.1.3680.009259
ORF1ab/nsp373T73IaCaaTa33B.1.1.4340.001046
ORF1ab/nsp373T73KaCaaAa33B.1.1.70.000003
ORF1ab/nsp373T73IaCaaTa33B.1.1470.002268
ORF1ab/nsp373T73IaCaaTa33B.1.1640.044776
ORF1ab/nsp373T73IaCaaTa33B.1.2430.000209
ORF1ab/nsp373T73TacAacC33B.1.4290.000071
ORF1ab/nsp373T73IaCaaTa33B.1.5960.000261
ORF1ab/nsp373T73delACA---33B.1.617.20.000011
ORF1ab/nsp373T73IaCaaTa33P.1.10.000953
ORF1ab/nsp373T73IaCaaTa33Q.80.000495
ORF1ab/nsp373T73delACA---220.111111
ORF1ab/nsp373T73TacAacG22AY.1000.000092
ORF1ab/nsp373T73IaCaaTa22AY.1140.000462
ORF1ab/nsp373T73IaCaaTa22AY.1190.000071
ORF1ab/nsp373T73IaCaaTa22AY.240.000862
ORF1ab/nsp373T73AAcaGca22AY.390.000049
ORF1ab/nsp373T73IaCaaTa22AY.4.30.001684
ORF1ab/nsp373T73RaCaaGa12AY.430.000004
ORF1ab/nsp373T73RaCAaGG12AY.430.000004
ORF1ab/nsp373T73TacAacG22AY.440.000012
ORF1ab/nsp373T73IaCaaTa22AY.5.40.000553
ORF1ab/nsp373T73IaCaaTa22AY.600.001876
ORF1ab/nsp373T73IaCaaTa22AY.690.000373
ORF1ab/nsp373T73AAcaGca22AY.750.000112
ORF1ab/nsp373T73IaCaaTa22AY.840.000875
ORF1ab/nsp373T73IaCaaTa22AY.90.000135
ORF1ab/nsp373T73IaCaaTa22AY.930.000546
ORF1ab/nsp373T73PAcaCca22AY.98.10.000097
ORF1ab/nsp373T73IaCaaTa22AY.99.20.000184
ORF1ab/nsp373T73delACA---22B.1.10.000036
ORF1ab/nsp373T73IaCaaTa22B.1.1.2840.000215
ORF1ab/nsp373T73IaCaaTa22B.1.1.2910.001485
ORF1ab/nsp373T73TacAacG22B.1.1.2940.002532
ORF1ab/nsp373T73TacAacG22B.1.1.330.000842
ORF1ab/nsp373T73IaCaaTa22B.1.1.330.000842
ORF1ab/nsp373T73delACA---22B.1.1.3480.001592
ORF1ab/nsp373T73PAcaCca22B.1.1600.000062
ORF1ab/nsp373T73IaCaaTa22B.1.177.570.000562
ORF1ab/nsp373T73delACA---22B.1.20.000018
ORF1ab/nsp373T73AAcaGca22B.1.20.000018
ORF1ab/nsp373T73IaCaaTa22B.1.2210.000142
ORF1ab/nsp373T73AAcaGca22B.1.2430.000139
ORF1ab/nsp373T73IaCaaTa22B.1.466.20.000782
ORF1ab/nsp373T73TacAacG22B.1.5260.000047
ORF1ab/nsp373T73IaCaaTa22B.1.6180.008065
ORF1ab/nsp373T73IaCaaTa22B.1.619.10.001283
ORF1ab/nsp373T73IaCaaTa22B.1.6210.000177
ORF1ab/nsp373T73IaCaaTa22B.6.60.001778
ORF1ab/nsp373T73IaCaaTa22C.160.002121
ORF1ab/nsp373T73IaCaaTa22D.20.00015
ORF1ab/nsp373T73delACA---22N.60.014184
ORF1ab/nsp373T73delACA---22P.10.000032
ORF1ab/nsp373T73IaCaaTa22P.1.140.000096
ORF1ab/nsp373T73IaCaaTa22P.20.000373
ORF1ab/nsp373T73IaCaaTa22Q.10.000253
ORF1ab/nsp373T73IaCaaTa11A0.000387
ORF1ab/nsp373T73IaCaaTa11A.2.50.000499
ORF1ab/nsp373T73IaCaaTa11A.230.010526
ORF1ab/nsp373T73GACAGGT11All0
ORF1ab/nsp373T73IaCaaTa11AY.100.00053
ORF1ab/nsp373T73delACA---11AY.1000.000046
ORF1ab/nsp373T73IaCaaTa11AY.1060.000335
ORF1ab/nsp373T73IaCaaTa11AY.1070.000466
ORF1ab/nsp373T73IaCaaTa11AY.1090.00074
ORF1ab/nsp373T73IaCaaTa11AY.1160.000287
ORF1ab/nsp373T73AAcaGca11AY.1190.000035
ORF1ab/nsp373T73IaCaaTa11AY.120.10.000321
ORF1ab/nsp373T73del2ACa--a11AY.120.10.000321
ORF1ab/nsp373T73IaCaaTa11AY.1210.000135
ORF1ab/nsp373T73AAcaGca11AY.230.00007
ORF1ab/nsp373T73delACA---11AY.250.000006
ORF1ab/nsp373T73delACA---11AY.260.000028
ORF1ab/nsp373T73AAcaGca11AY.30.00001
ORF1ab/nsp373T73VACAGTC11AY.30.00001
ORF1ab/nsp373T73delACA---11AY.330.000067
ORF1ab/nsp373T73IaCaaTa11AY.360.000148
ORF1ab/nsp373T73IaCaaTa11AY.380.000499
ORF1ab/nsp373T73AAcaGca11AY.4.2.10.000149
ORF1ab/nsp373T73delACA---11AY.420.00004
ORF1ab/nsp373T73AAcaGca11AY.430.000004
ORF1ab/nsp373T73VACAGTC11AY.430.000004
ORF1ab/nsp373T73MaCAaTG11AY.430.000004
ORF1ab/nsp373T73delACA---11AY.430.000004
ORF1ab/nsp373T73SaCAaGC11AY.430.000004
ORF1ab/nsp373T73TacAacG11AY.460.000104
ORF1ab/nsp373T73delACA---11AY.460.000104
ORF1ab/nsp373T73IaCaaTa11AY.46.10.001027
ORF1ab/nsp373T73IaCaaTa11AY.46.50.000198
ORF1ab/nsp373T73del1acAac-11AY.470.000031
ORF1ab/nsp373T73IaCaaTa11AY.650.000533
ORF1ab/nsp373T73KaCaaAa11AY.650.000533
ORF1ab/nsp373T73MaCAaTG11AY.670.000464
ORF1ab/nsp373T73IaCaaTa11AY.670.000464
ORF1ab/nsp373T73TacAacG11AY.670.000464
ORF1ab/nsp373T73TacAacG11AY.690.000187
ORF1ab/nsp373T73IaCaaTa11AY.75.10.00018
ORF1ab/nsp373T73SAcaTca11AY.790.001211
ORF1ab/nsp373T73TacAacG11AY.9.20.000037
ORF1ab/nsp373T73delACA---11AY.990.001049
ORF1ab/nsp373T73delACA---11AZ.20.000821
ORF1ab/nsp373T73TacAacG11B0.000128
ORF1ab/nsp373T73NaCAaAC11B.10.000009
ORF1ab/nsp373T73KaCaaAa11B.10.000009
ORF1ab/nsp373T73AAcaGca11B.1.10.000018
ORF1ab/nsp373T73MaCAaTG11B.1.10.000018
ORF1ab/nsp373T73IaCaaTa11B.1.1.10.000327
ORF1ab/nsp373T73IaCaaTa11B.1.1.1920.002309
ORF1ab/nsp373T73TacAacG11B.1.1.1980.001468
ORF1ab/nsp373T73IaCaaTa11B.1.1.250.000569
ORF1ab/nsp373T73IaCaaTa11B.1.1.3060.000438
ORF1ab/nsp373T73IaCaaTa11B.1.1.3110.000358
ORF1ab/nsp373T73IaCaaTa11B.1.1.3150.008475
ORF1ab/nsp373T73IaCaaTa11B.1.1.3170.000412
ORF1ab/nsp373T73IaCaaTa11B.1.1.3180.000302
ORF1ab/nsp373T73IaCaaTa11B.1.1.3480.000796
ORF1ab/nsp373T73IaCaaTa11B.1.1.3720.000689
ORF1ab/nsp373T73AAcaGca11B.1.1.3890.006061
ORF1ab/nsp373T73IaCaaTa11B.1.1.5280.004808
ORF1ab/nsp373T73IaCaaTa11B.1.1.610.008772
ORF1ab/nsp373T73RaCaaGa11B.1.1.70.000001
ORF1ab/nsp373T73VACAGTG11B.1.1.70.000001
ORF1ab/nsp373T73PAcaCca11B.1.1.70.000001
ORF1ab/nsp373T73del1Aca-ca11B.1.1.70.000001
ORF1ab/nsp373T73TacAacG11B.1.1770.000013
ORF1ab/nsp373T73KaCaaAa11B.1.177.210.000076
ORF1ab/nsp373T73IaCaaTa11B.1.177.310.011494
ORF1ab/nsp373T73IaCaaTa11B.1.177.400.005155
ORF1ab/nsp373T73IaCaaTa11B.1.177.440.000519
ORF1ab/nsp373T73AAcaGca11B.1.177.510.004566
ORF1ab/nsp373T73IaCaaTa11B.1.177.520.001757
ORF1ab/nsp373T73AAcaGca11B.1.177.540.000606
ORF1ab/nsp373T73IaCaaTa11B.1.177.540.000606
ORF1ab/nsp373T73delACA---11B.1.177.540.000606
ORF1ab/nsp373T73AAcaGca11B.1.177.600.000218
ORF1ab/nsp373T73AAcaGca11B.1.177.810.000189
ORF1ab/nsp373T73IaCaaTa11B.1.177.810.000189
ORF1ab/nsp373T73IaCaaTa11B.1.177.830.001481
ORF1ab/nsp373T73AAcaGca11B.1.177.870.000728
ORF1ab/nsp373T73TacAacG11B.1.20.000009
ORF1ab/nsp373T73IaCaaTa11B.1.214.20.0006
ORF1ab/nsp373T73IaCaaTa11B.1.220.001318
ORF1ab/nsp373T73IaCaaTa11B.1.2230.002778
ORF1ab/nsp373T73IaCaaTa11B.1.2340.000132
ORF1ab/nsp373T73IaCaaTa11B.1.2400.000216
ORF1ab/nsp373T73IaCaaTa11B.1.258.170.000104
ORF1ab/nsp373T73IaCaaTa11B.1.258.90.005
ORF1ab/nsp373T73IaCaaTa11B.1.3110.000275
ORF1ab/nsp373T73delACA---11B.1.3490.000715
ORF1ab/nsp373T73IaCaaTa11B.1.351.20.000303
ORF1ab/nsp373T73TacAacG11B.1.360.000146
ORF1ab/nsp373T73AAcaGca11B.1.36.350.002604
ORF1ab/nsp373T73IaCaaTa11B.1.36.80.001
ORF1ab/nsp373T73IaCaaTa11B.1.3690.000285
ORF1ab/nsp373T73IaCaaTa11B.1.3810.007812
ORF1ab/nsp373T73IaCaaTa11B.1.3890.001002
ORF1ab/nsp373T73AAcAGcT11B.1.4160.001269
ORF1ab/nsp373T73delACA---11B.1.416.10.001563
ORF1ab/nsp373T73TacAacG11B.1.4270.00005
ORF1ab/nsp373T73delACA---11B.1.4290.000024
ORF1ab/nsp373T73IaCaaTa11B.1.438.10.000107
ORF1ab/nsp373T73IaCaaTa11B.1.4650.003802
ORF1ab/nsp373T73IaCaaTa11B.1.4990.00105
ORF1ab/nsp373T73delACA---11B.1.5170.000427
ORF1ab/nsp373T73IaCaaTa11B.1.5170.000427
ORF1ab/nsp373T73SAcaTca11B.1.5240.001406
ORF1ab/nsp373T73IaCaaTa11B.1.5250.000113
ORF1ab/nsp373T73TacAacG11B.1.5640.000426
ORF1ab/nsp373T73IaCaaTa11B.1.5760.000907
ORF1ab/nsp373T73delACA---11B.1.5770.000687
ORF1ab/nsp373T73IaCaaTa11B.1.5880.00091
ORF1ab/nsp373T73TacAacG11B.1.5950.000261
ORF1ab/nsp373T73IaCaaTa11B.1.5950.000261
ORF1ab/nsp373T73AAcaGca11B.1.5960.000087
ORF1ab/nsp373T73delACA---11B.1.5960.000087
ORF1ab/nsp373T73IaCaaTa11B.1.6030.010638
ORF1ab/nsp373T73IaCaaTa11B.1.6090.000479
ORF1ab/nsp373T73IaCaaTa11B.1.6130.027027
ORF1ab/nsp373T73del1acAac-11B.1.617.20.000004
ORF1ab/nsp373T73TacAacG11B.1.617.20.000004
ORF1ab/nsp373T73KaCaaAa11B.1.617.20.000004
ORF1ab/nsp373T73GACAGGT11B.1.617.20.000004
ORF1ab/nsp373T73TacAacG11B.1.6210.000089
ORF1ab/nsp373T73del1acAac-11B.1.6210.000089
ORF1ab/nsp373T73IaCaaTa11B.1.760.011364
ORF1ab/nsp373T73IaCaaTa11B.400.000364
ORF1ab/nsp373T73delACA---11C.170.055556
ORF1ab/nsp373T73IaCaaTa11C.37.10.002618
ORF1ab/nsp373T73IaCaaTa11K.30.006173
ORF1ab/nsp373T73KaCaaAa11P.10.000016
ORF1ab/nsp373T73TacAacG11P.10.000016
ORF1ab/nsp373T73AAcaGca11P.10.000016
ORF1ab/nsp373T73TacAacG11P.1.150.000232
ORF1ab/nsp373T73IaCaaTa11P.1.160.000374
ORF1ab/nsp373T73KaCaaAa11P.1.160.000374
ORF1ab/nsp373T73IaCaaTa11P.70.004367
ORF1ab/nsp373T73IaCaaTa11U.30.003861

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.