CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 729 & Codon = gCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3729D729AD1547AnonsyngAtgCt545414904-4906

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3729D729AgAtgCt5454All0.00001
ORF1ab/nsp3729D729AgAtgCt99B.1.1.70.000008
ORF1ab/nsp3729D729AgAtgCt99B.1.617.20.000034
ORF1ab/nsp3729D729AgAtgCt88B.1.36.310.014011
ORF1ab/nsp3729D729AgAtgCt66AY.1020.000159
ORF1ab/nsp3729D729AgAtgCt66AY.40.000009
ORF1ab/nsp3729D729AgAtgCt22B.1.1770.000026
ORF1ab/nsp3729D729AgAtgCt22B.1.4290.000047
ORF1ab/nsp3729D729AgAtgCt22P.10.000032
ORF1ab/nsp3729D729AgAtgCt11AY.1200.000037
ORF1ab/nsp3729D729AgAtgCt11AY.260.000028
ORF1ab/nsp3729D729AgAtgCt11AY.330.000067
ORF1ab/nsp3729D729AgAtgCt11AY.9.20.000037
ORF1ab/nsp3729D729AgAtgCt11AY.98.10.000048
ORF1ab/nsp3729D729AgAtgCt11B.1.1.3110.000358
ORF1ab/nsp3729D729AgAtgCt11B.1.1600.000031
ORF1ab/nsp3729D729AgAtgCt11B.1.177.460.000918
ORF1ab/nsp3729D729AgAtgCt11B.1.3690.000285
ORF1ab/nsp3729D729AgAtgCt11B.1.6190.000871