CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 724

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3724T724TT1542TsynacCacT21197211270.9966984889-4891
ORF1ab/nsp3724T724TT1542TsynacCacA21197660.003113654889-4891
ORF1ab/nsp3724T724TT1542TsynacCacG2119740.0001887064889-4891
ORF1ab/nsp3724T724IT1542InonsynaCcaTc927692730.9996774889-4891
ORF1ab/nsp3724T724IT1542InonsynaCCaTT927630.0003234154889-4891
ORF1ab/nsp3724T724NT1542NnonsynaCcaAc24024014889-4891
ORF1ab/nsp3724T724delT1542deldelACC---979714889-4891
ORF1ab/nsp3724T724AT1542AnonsynAccGcc313114889-4891
ORF1ab/nsp3724T724del1T1542del1delacCac-750.7142864889-4891
ORF1ab/nsp3724T724del1T1542del1delaCca-c710.1428574889-4891
ORF1ab/nsp3724T724del1T1542del1delACC-TT710.1428574889-4891
ORF1ab/nsp3724T724ST1542SnonsynAcCTcA520.44889-4891
ORF1ab/nsp3724T724ST1542SnonsynAccTcc520.44889-4891
ORF1ab/nsp3724T724ST1542SnonsynaCcaGc510.24889-4891
ORF1ab/nsp3724T724PT1542PnonsynAccCcc3314889-4891
ORF1ab/nsp3724T724VT1542VnonsynACCGTT320.6666674889-4891
ORF1ab/nsp3724T724VT1542VnonsynACCGTA310.3333334889-4891
ORF1ab/nsp3724T724del2T1542del2delaCCa--1114889-4891
ORF1ab/nsp3724T724HT1542HnonsynACcCAc1114889-4891

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3724T724TacCacT2112721197All0.004041
ORF1ab/nsp3724T724TacCacA6621197All0.000013
ORF1ab/nsp3724T724TacCacG421197All0.000001
ORF1ab/nsp3724T724IaCcaTc92739276All0.001774
ORF1ab/nsp3724T724IaCCaTT39276All0.000001
ORF1ab/nsp3724T724TacCacT89518955AY.40.013932
ORF1ab/nsp3724T724TacCacA48955AY.40.000006
ORF1ab/nsp3724T724TacCacT43974397AY.700.916806
ORF1ab/nsp3724T724IaCcaTc24452445B.1.1.70.002189
ORF1ab/nsp3724T724IaCcaTc19541954AY.670.907149
ORF1ab/nsp3724T724TacCacT18931902B.1.1.70.001695
ORF1ab/nsp3724T724TacCacA91902B.1.1.70.000008
ORF1ab/nsp3724T724TacCacT14271427B.1.214.20.855516
ORF1ab/nsp3724T724TacCacT10051016B.1.617.20.003784
ORF1ab/nsp3724T724TacCacA111016B.1.617.20.000041
ORF1ab/nsp3724T724IaCcaTc602602AY.1030.003738
ORF1ab/nsp3724T724IaCcaTc576576C.300.994819
ORF1ab/nsp3724T724IaCcaTc519519B.1.4290.012211
ORF1ab/nsp3724T724IaCcaTc510513AY.40.000794
ORF1ab/nsp3724T724IaCCaTT3513AY.40.000005
ORF1ab/nsp3724T724TacCacT392393AY.430.001737
ORF1ab/nsp3724T724TacCacA1393AY.430.000004
ORF1ab/nsp3724T724TacCacT289290AY.440.001759
ORF1ab/nsp3724T724TacCacA1290AY.440.000006
ORF1ab/nsp3724T724IaCcaTc275275AY.430.001218
ORF1ab/nsp3724T724NaCcaAc240240All0.000046
ORF1ab/nsp3724T724TacCacT231233AY.470.007185
ORF1ab/nsp3724T724TacCacA2233AY.470.000062
ORF1ab/nsp3724T724TacCacT212212B.1.1770.002792
ORF1ab/nsp3724T724NaCcaAc203203AY.440.001236
ORF1ab/nsp3724T724TacCacT186188AY.250.001119
ORF1ab/nsp3724T724TacCacA2188AY.250.000012
ORF1ab/nsp3724T724IaCcaTc178178B.1.1.3180.053712
ORF1ab/nsp3724T724TacCacT170177B.1.20.001497
ORF1ab/nsp3724T724TacCacA7177B.1.20.000062
ORF1ab/nsp3724T724IaCcaTc161161B.1.351.20.048714
ORF1ab/nsp3724T724IaCcaTc149149C.30.11
ORF1ab/nsp3724T724TacCacT132141AY.1020.0035
ORF1ab/nsp3724T724TacCacA9141AY.1020.000239
ORF1ab/nsp3724T724TacCacT124129AY.1030.00077
ORF1ab/nsp3724T724TacCacA5129AY.1030.000031
ORF1ab/nsp3724T724IaCcaTc127127P.10.002001
ORF1ab/nsp3724T724IaCcaTc126126B.1.617.20.000474
ORF1ab/nsp3724T724TacCacT118118B.1.214.30.842857
ORF1ab/nsp3724T724IaCcaTc114114B.1.6100.404255
ORF1ab/nsp3724T724IaCcaTc113113AY.1020.002996
ORF1ab/nsp3724T724IaCcaTc113113B.1.20.000995
ORF1ab/nsp3724T724TacCacT109109B.1.214.40.990909
ORF1ab/nsp3724T724TacCacT103105B.10.000943
ORF1ab/nsp3724T724TacCacA2105B.10.000018
ORF1ab/nsp3724T724delACC---9797All0.000019
ORF1ab/nsp3724T724TacCacT8484AY.4.20.001822
ORF1ab/nsp3724T724IaCcaTc6767AY.440.000408
ORF1ab/nsp3724T724IaCcaTc6666AY.250.000397
ORF1ab/nsp3724T724IaCcaTc6666B.1.10.001197
ORF1ab/nsp3724T724IaCcaTc6363B.1.3260.477273
ORF1ab/nsp3724T724TacCacT5758P.10.000898
ORF1ab/nsp3724T724TacCacA158P.10.000016
ORF1ab/nsp3724T724TacCacT5757B.1.258.110.022592
ORF1ab/nsp3724T724TacCacT5353AY.30.000527
ORF1ab/nsp3724T724IaCcaTc5252B.1.1.5190.002065
ORF1ab/nsp3724T724IaCcaTc5151B.10.000467
ORF1ab/nsp3724T724IaCcaTc5050B.1.1770.000658
ORF1ab/nsp3724T724TacCacT4749AY.390.001161
ORF1ab/nsp3724T724TacCacA249AY.390.000049
ORF1ab/nsp3724T724TacCacT4849B.1.10.000871
ORF1ab/nsp3724T724TacCacA149B.1.10.000018
ORF1ab/nsp3724T724TacCacT4545B.1.6370.003288
ORF1ab/nsp3724T724IaCcaTc4343AY.200.001671
ORF1ab/nsp3724T724TacCacT4041B.1.1600.001248
ORF1ab/nsp3724T724TacCacA141B.1.1600.000031
ORF1ab/nsp3724T724IaCcaTc3636AY.30.000358
ORF1ab/nsp3724T724delACC---3535B.1.1.70.000031
ORF1ab/nsp3724T724IaCcaTc3333AZ.20.027094
ORF1ab/nsp3724T724AAccGcc3131All0.000006
ORF1ab/nsp3724T724TacCacT3131AY.1170.00262
ORF1ab/nsp3724T724IaCcaTc3030B.1.1.10.009801
ORF1ab/nsp3724T724IaCcaTc2626B.1.5250.002942
ORF1ab/nsp3724T724TacCacT2626Q.30.003771
ORF1ab/nsp3724T724TacCacT2323AY.260.000651
ORF1ab/nsp3724T724TacCacT2222B.1.1.630.008488
ORF1ab/nsp3724T724IaCcaTc2222B.1.3110.006041
ORF1ab/nsp3724T724TacCacT2222B.1.6210.001947
ORF1ab/nsp3724T724TacCacT2121AY.50.000434
ORF1ab/nsp3724T724IaCcaTc2121B.1.1.2220.004284
ORF1ab/nsp3724T724TacCacT2121B.1.1.4200.021127
ORF1ab/nsp3724T724TacCacT2121B.1.1.5190.000834
ORF1ab/nsp3724T724TacCacT2121B.1.5960.00183
ORF1ab/nsp3724T724TacCacT2020AY.98.10.000969
ORF1ab/nsp3724T724IaCcaTc2020P.1.70.006386
ORF1ab/nsp3724T724IaCcaTc1818AY.50.000372
ORF1ab/nsp3724T724IaCcaTc1818B.1.1600.000561
ORF1ab/nsp3724T724TacCacT1818B.1.2210.001279
ORF1ab/nsp3724T724IaCcaTc1717B.1.1.4860.026814
ORF1ab/nsp3724T724TacCacT1616AY.290.000252
ORF1ab/nsp3724T724TacCacT1616B.1.2100.034115
ORF1ab/nsp3724T724IaCcaTc1616B.1.4270.000808
ORF1ab/nsp3724T724IaCcaTc1515AY.1190.00053
ORF1ab/nsp3724T724TacCacT1515B.1.1.1890.022693
ORF1ab/nsp3724T724IaCcaTc1515B.1.5950.003914
ORF1ab/nsp3724T724TacCacT1414AY.1200.000521
ORF1ab/nsp3724T724TacCacT1414AY.140.001232
ORF1ab/nsp3724T724IaCcaTc1414B.1.177.540.00849
ORF1ab/nsp3724T724IaCcaTc1414B.1.2210.000994
ORF1ab/nsp3724T724IaCcaTc1414P.1.40.013672
ORF1ab/nsp3724T724TacCacT1313AY.1060.004354
ORF1ab/nsp3724T724TacCacT1313AY.420.000523
ORF1ab/nsp3724T724TacCacT1313B.1.4290.000306
ORF1ab/nsp3724T724TacCacT1313B.1.5260.000306
ORF1ab/nsp3724T724IaCcaTc1313P.1.140.000621
ORF1ab/nsp3724T724IaCcaTc1212AY.620.005229
ORF1ab/nsp3724T724TacCacT1212B.1.36.80.012
ORF1ab/nsp3724T724TacCacT1112B.1.4270.000555
ORF1ab/nsp3724T724TacCacA112B.1.4270.00005
ORF1ab/nsp3724T724TacCacT1212P.1.160.004489
ORF1ab/nsp3724T724TacCacT1011AY.1190.000353
ORF1ab/nsp3724T724TacCacA111AY.1190.000035
ORF1ab/nsp3724T724TacCacT1111AY.46.60.000794
ORF1ab/nsp3724T724IaCcaTc1111AY.470.000342
ORF1ab/nsp3724T724TacCacT1111AY.9.10.000921
ORF1ab/nsp3724T724IaCcaTc1111B.1.1.2940.013924
ORF1ab/nsp3724T724NaCcaAc1111B.1.1770.000145
ORF1ab/nsp3724T724IaCcaTc1111B.1.2340.001451
ORF1ab/nsp3724T724IaCcaTc1111B.1.360.001605
ORF1ab/nsp3724T724IaCcaTc1010AY.530.002875
ORF1ab/nsp3724T724IaCcaTc1010B.1.2580.000665
ORF1ab/nsp3724T724IaCcaTc1010B.1.6370.000731
ORF1ab/nsp3724T724TacCacT1010C.370.001161
ORF1ab/nsp3724T724TacCacT1010P.1.140.000478
ORF1ab/nsp3724T724IaCcaTc1010R.10.0009
ORF1ab/nsp3724T724TacCacT99AY.1000.000414
ORF1ab/nsp3724T724IaCcaTc99AY.230.000628
ORF1ab/nsp3724T724IaCcaTc99AY.290.000142
ORF1ab/nsp3724T724TacCacT99AY.330.000601
ORF1ab/nsp3724T724IaCcaTc99AY.9.20.000331
ORF1ab/nsp3724T724TacCacT99B.1.177.210.000688
ORF1ab/nsp3724T724TacCacT89B.1.3510.000238
ORF1ab/nsp3724T724TacCacA19B.1.3510.00003
ORF1ab/nsp3724T724TacCacT88AA.50.129032
ORF1ab/nsp3724T724TacCacT88AY.230.000558
ORF1ab/nsp3724T724TacCacT88AY.3.10.000682
ORF1ab/nsp3724T724IaCcaTc88AY.330.000534
ORF1ab/nsp3724T724TacCacT88AY.360.001186
ORF1ab/nsp3724T724IaCcaTc88AY.4.20.000174
ORF1ab/nsp3724T724TacCacT88AY.46.30.00747
ORF1ab/nsp3724T724IaCcaTc88AY.840.0035
ORF1ab/nsp3724T724IaCcaTc88B.1.177.440.004152
ORF1ab/nsp3724T724TacCacT88B.1.2140.029304
ORF1ab/nsp3724T724TacCacT88B.1.2430.000557
ORF1ab/nsp3724T724TacCacT88B.1.36.310.014011
ORF1ab/nsp3724T724IaCcaTc88B.1.595.20.32
ORF1ab/nsp3724T724NaCcaAc88B.1.617.20.00003
ORF1ab/nsp3724T724IaCcaTc77A.2.50.003493
ORF1ab/nsp3724T724del1acCac-57All0.000001
ORF1ab/nsp3724T724del1ACC-TT17All0
ORF1ab/nsp3724T724del1aCca-c17All0
ORF1ab/nsp3724T724IaCcaTc77AY.690.001307
ORF1ab/nsp3724T724TacCacT77AY.750.000392
ORF1ab/nsp3724T724TacCacT77B.1.1.2140.000388
ORF1ab/nsp3724T724TacCacT77B.1.1.2220.001428
ORF1ab/nsp3724T724TacCacT77B.1.2190.066038
ORF1ab/nsp3724T724TacCacT77B.1.2580.000466
ORF1ab/nsp3724T724IaCcaTc77B.1.5260.000165
ORF1ab/nsp3724T724delACC---77B.1.617.20.000026
ORF1ab/nsp3724T724TacCacT77P.1.40.006836
ORF1ab/nsp3724T724TacCacT66AY.1180.000376
ORF1ab/nsp3724T724TacCacT66AY.1210.000812
ORF1ab/nsp3724T724IaCcaTc66AY.390.000148
ORF1ab/nsp3724T724AAccGcc66AY.40.000009
ORF1ab/nsp3724T724TacCacT66AY.4.50.000645
ORF1ab/nsp3724T724TacCacT56AY.460.00052
ORF1ab/nsp3724T724TacCacA16AY.460.000104
ORF1ab/nsp3724T724IaCcaTc66AY.46.40.000987
ORF1ab/nsp3724T724IaCcaTc66AY.7.10.000676
ORF1ab/nsp3724T724IaCcaTc66B.1.1.3010.007075
ORF1ab/nsp3724T724delACC---66B.1.1770.000079
ORF1ab/nsp3724T724TacCacT66B.1.177.460.00551
ORF1ab/nsp3724T724TacCacT66B.1.214.10.12
ORF1ab/nsp3724T724IaCcaTc66B.1.2430.000418
ORF1ab/nsp3724T724IaCcaTc66B.1.438.10.000644
ORF1ab/nsp3724T724IaCcaTc66P.20.00112
ORF1ab/nsp3724T724TacCacT66Q.10.000758
ORF1ab/nsp3724T724SAcCTcA25All0
ORF1ab/nsp3724T724SAccTcc25All0
ORF1ab/nsp3724T724SaCcaGc15All0
ORF1ab/nsp3724T724TacCacT55AY.200.000194
ORF1ab/nsp3724T724TacCacT55AY.4.40.002046
ORF1ab/nsp3724T724TacCacT55AY.450.000608
ORF1ab/nsp3724T724TacCacT55AY.5.40.001384
ORF1ab/nsp3724T724TacCacT55AY.540.000477
ORF1ab/nsp3724T724TacCacT55AY.680.001369
ORF1ab/nsp3724T724TacCacT55AY.920.001436
ORF1ab/nsp3724T724IaCcaTc55AY.940.002213
ORF1ab/nsp3724T724IaCcaTc55AY.99.20.000461
ORF1ab/nsp3724T724IaCcaTc55B.1.1.250.002843
ORF1ab/nsp3724T724TacCacT55B.1.1.280.001556
ORF1ab/nsp3724T724TacCacT55B.1.1.3060.002192
ORF1ab/nsp3724T724TacCacT55B.1.1.4320.006329
ORF1ab/nsp3724T724TacCacT55B.1.4090.003906
ORF1ab/nsp3724T724TacCacT55B.1.5710.048544
ORF1ab/nsp3724T724IaCcaTc55B.1.6210.000443
ORF1ab/nsp3724T724IaCcaTc55B.1.6310.016835
ORF1ab/nsp3724T724TacCacT55P.1.150.001162
ORF1ab/nsp3724T724TacCacT55Q.80.000825
ORF1ab/nsp3724T724TacCacT44AY.320.00213
ORF1ab/nsp3724T724IaCcaTc44AY.410.001176
ORF1ab/nsp3724T724IaCcaTc44AY.60.000165
ORF1ab/nsp3724T724IaCcaTc44AY.650.002132
ORF1ab/nsp3724T724IaCcaTc44AY.750.000224
ORF1ab/nsp3724T724IaCcaTc44B0.000511
ORF1ab/nsp3724T724IaCcaTc44B.1.1.3170.001647
ORF1ab/nsp3724T724IaCcaTc44B.1.1.330.001684
ORF1ab/nsp3724T724IaCcaTc44B.1.1110.0047
ORF1ab/nsp3724T724IaCcaTc44B.1.1280.002541
ORF1ab/nsp3724T724TacCacT44B.1.2400.000862
ORF1ab/nsp3724T724IaCcaTc44B.1.3510.000119
ORF1ab/nsp3724T724TacCacT44B.1.351.20.00121
ORF1ab/nsp3724T724TacCacT44B.1.360.000584
ORF1ab/nsp3724T724AAccGcc44B.1.36.180.001681
ORF1ab/nsp3724T724IaCcaTc44B.1.4280.004082
ORF1ab/nsp3724T724IaCcaTc44B.1.6200.003784
ORF1ab/nsp3724T724TacCacT44C.230.023256
ORF1ab/nsp3724T724TacCacT34D.20.000225
ORF1ab/nsp3724T724TacCacG14D.20.000075
ORF1ab/nsp3724T724TacCacT44P.1.70.001277
ORF1ab/nsp3724T724PAccCcc33All0.000001
ORF1ab/nsp3724T724VACCGTT23All0
ORF1ab/nsp3724T724VACCGTA13All0
ORF1ab/nsp3724T724TacCacT33AY.1090.002219
ORF1ab/nsp3724T724IaCcaTc33AY.1170.000254
ORF1ab/nsp3724T724IaCcaTc33AY.1200.000112
ORF1ab/nsp3724T724TacCacT33AY.160.001139
ORF1ab/nsp3724T724TacCacT33AY.240.001293
ORF1ab/nsp3724T724TacCacT33AY.340.000291
ORF1ab/nsp3724T724AAccGcc33AY.440.000018
ORF1ab/nsp3724T724TacCacT33AY.46.20.001906
ORF1ab/nsp3724T724IaCcaTc33AY.520.002443
ORF1ab/nsp3724T724IaCcaTc33AY.610.000314
ORF1ab/nsp3724T724TacCacT33AY.740.000347
ORF1ab/nsp3724T724TacCacT33AY.75.10.000541
ORF1ab/nsp3724T724IaCcaTc33AY.90.000203
ORF1ab/nsp3724T724TacCacT33AY.930.000819
ORF1ab/nsp3724T724TacCacT33B0.000383
ORF1ab/nsp3724T724AAccGcc33B.1.1.1410.006036
ORF1ab/nsp3724T724TacCacT33B.1.1.2160.002671
ORF1ab/nsp3724T724TacCacT33B.1.1.2940.003797
ORF1ab/nsp3724T724TacCacT33B.1.1.3330.003229
ORF1ab/nsp3724T724TacCacT33B.1.1.3480.002389
ORF1ab/nsp3724T724TacCacT33B.1.1.390.001529
ORF1ab/nsp3724T724del1acCac-33B.1.1.70.000003
ORF1ab/nsp3724T724TacCacT33B.1.1260.003827
ORF1ab/nsp3724T724IaCcaTc33B.1.177.510.013699
ORF1ab/nsp3724T724IaCcaTc33B.1.177.620.003576
ORF1ab/nsp3724T724TacCacT33B.1.177.730.001699
ORF1ab/nsp3724T724IaCcaTc33B.1.258.30.005025
ORF1ab/nsp3724T724TacCacT33B.1.351.30.002629
ORF1ab/nsp3724T724TacCacT33B.1.36.10.003421
ORF1ab/nsp3724T724IaCcaTc33B.1.3610.003866
ORF1ab/nsp3724T724IaCcaTc33B.1.3960.002117
ORF1ab/nsp3724T724TacCacT33B.1.4330.009585
ORF1ab/nsp3724T724IaCcaTc33B.1.4560.009804
ORF1ab/nsp3724T724IaCcaTc33B.1.5090.002597
ORF1ab/nsp3724T724IaCcaTc33B.1.930.002801
ORF1ab/nsp3724T724IaCcaTc33C.36.30.001702
ORF1ab/nsp3724T724TacCacT33P.20.00056
ORF1ab/nsp3724T724SAcCTcA220.111111
ORF1ab/nsp3724T724VACCGTT220.111111
ORF1ab/nsp3724T724TacCacT12A0.000387
ORF1ab/nsp3724T724TacCacG12A0.000387
ORF1ab/nsp3724T724TacCacT22A.2.50.000998
ORF1ab/nsp3724T724TacCacT12AY.1050.000643
ORF1ab/nsp3724T724TacCacA12AY.1050.000643
ORF1ab/nsp3724T724TacCacT22AY.1100.000225
ORF1ab/nsp3724T724IaCcaTc22AY.1110.000366
ORF1ab/nsp3724T724AAccGcc22AY.1200.000074
ORF1ab/nsp3724T724IaCcaTc22AY.240.000862
ORF1ab/nsp3724T724IaCcaTc22AY.260.000057
ORF1ab/nsp3724T724IaCcaTc22AY.270.000129
ORF1ab/nsp3724T724TacCacT22AY.270.000129
ORF1ab/nsp3724T724delACC---22AY.30.00002
ORF1ab/nsp3724T724NaCcaAc22AY.30.00002
ORF1ab/nsp3724T724IaCcaTc22AY.340.000194
ORF1ab/nsp3724T724delACC---22AY.40.000003
ORF1ab/nsp3724T724NaCcaAc22AY.40.000003
ORF1ab/nsp3724T724TacCacT22AY.4.2.10.000298
ORF1ab/nsp3724T724IaCcaTc22AY.4.30.001684
ORF1ab/nsp3724T724TacCacT22AY.410.000588
ORF1ab/nsp3724T724delACC---22AY.430.000009
ORF1ab/nsp3724T724delACC---22AY.440.000012
ORF1ab/nsp3724T724IaCcaTc22AY.450.000243
ORF1ab/nsp3724T724IaCcaTc22AY.460.000208
ORF1ab/nsp3724T724IaCcaTc22AY.46.30.001867
ORF1ab/nsp3724T724TacCacT22AY.5.30.000675
ORF1ab/nsp3724T724TacCacT22AY.530.000575
ORF1ab/nsp3724T724NaCcaAc22AY.670.000929
ORF1ab/nsp3724T724TacCacT22AY.690.000373
ORF1ab/nsp3724T724IaCcaTc22AY.75.10.000361
ORF1ab/nsp3724T724TacCacT22AY.860.00166
ORF1ab/nsp3724T724IaCcaTc22AY.900.001369
ORF1ab/nsp3724T724IaCcaTc22AY.920.000575
ORF1ab/nsp3724T724IaCcaTc22AY.960.004149
ORF1ab/nsp3724T724delACC---22B.10.000018
ORF1ab/nsp3724T724AAccGcc22B.10.000018
ORF1ab/nsp3724T724TacCacT22B.1.1.10.000653
ORF1ab/nsp3724T724IaCcaTc22B.1.1.1170.019417
ORF1ab/nsp3724T724IaCcaTc22B.1.1.1890.003026
ORF1ab/nsp3724T724TacCacG22B.1.1.1920.004619
ORF1ab/nsp3724T724IaCcaTc22B.1.1.2140.000111
ORF1ab/nsp3724T724IaCcaTc22B.1.1.2160.001781
ORF1ab/nsp3724T724IaCcaTc22B.1.1.280.000622
ORF1ab/nsp3724T724TacCacT22B.1.1.2840.000215
ORF1ab/nsp3724T724TacCacT22B.1.1.330.000842
ORF1ab/nsp3724T724IaCcaTc22B.1.1.3720.001377
ORF1ab/nsp3724T724IaCcaTc22B.1.1.3790.0625
ORF1ab/nsp3724T724TacCacT22B.1.1.4160.00181
ORF1ab/nsp3724T724IaCcaTc22B.1.1.4320.002532
ORF1ab/nsp3724T724TacCacT22B.1.1.5230.003125
ORF1ab/nsp3724T724IaCcaTc22B.1.1.670.009132
ORF1ab/nsp3724T724TacCacT22B.1.1.700.000682
ORF1ab/nsp3724T724IaCcaTc22B.1.1570.00597
ORF1ab/nsp3724T724TacCacT22B.1.177.40.000422
ORF1ab/nsp3724T724IaCcaTc22B.1.177.580.002663
ORF1ab/nsp3724T724IaCcaTc22B.1.177.600.000437
ORF1ab/nsp3724T724TacCacT22B.1.258.140.001961
ORF1ab/nsp3724T724NaCcaAc22B.1.258.30.00335
ORF1ab/nsp3724T724IaCcaTc22B.1.2650.002541
ORF1ab/nsp3724T724TacCacT22B.1.3110.000549
ORF1ab/nsp3724T724TacCacT22B.1.3200.002491
ORF1ab/nsp3724T724TacCacT22B.1.3480.036364
ORF1ab/nsp3724T724delACC---22B.1.360.000292
ORF1ab/nsp3724T724IaCcaTc22B.1.3690.00057
ORF1ab/nsp3724T724TacCacT22B.1.3890.002004
ORF1ab/nsp3724T724IaCcaTc22B.1.4040.002604
ORF1ab/nsp3724T724IaCcaTc22B.1.5380.016129
ORF1ab/nsp3724T724TacCacT22B.1.5640.000852
ORF1ab/nsp3724T724IaCcaTc22B.1.564.10.003155
ORF1ab/nsp3724T724TacCacT22B.1.5740.004301
ORF1ab/nsp3724T724TacCacT22B.1.5770.001375
ORF1ab/nsp3724T724IaCcaTc22B.1.5960.000174
ORF1ab/nsp3724T724TacCacT22B.1.617.10.000258
ORF1ab/nsp3724T724AAccGcc22B.1.617.20.000008
ORF1ab/nsp3724T724delACC---22B.1.6190.001742
ORF1ab/nsp3724T724TacCacT22B.1.6230.001073
ORF1ab/nsp3724T724TacCacA22B.1.6340.006849
ORF1ab/nsp3724T724IaCcaTc22C.230.011628
ORF1ab/nsp3724T724IaCcaTc22N.50.003534
ORF1ab/nsp3724T724delACC---22P.10.000032
ORF1ab/nsp3724T724TacCacT22P.1.10.000635
ORF1ab/nsp3724T724TacCacT22P.1.100.000539
ORF1ab/nsp3724T724IaCcaTc22P.1.170.000324
ORF1ab/nsp3724T724IaCcaTc22Q.10.000253
ORF1ab/nsp3724T724IaCcaTc22Q.30.00029
ORF1ab/nsp3724T724TacCacT22R.10.00018
ORF1ab/nsp3724T724IaCcaTc11A0.000387
ORF1ab/nsp3724T724IaCcaTc11A.20.000662
ORF1ab/nsp3724T724TacCacT11A.20.000662
ORF1ab/nsp3724T724IaCcaTc11A.2.20.001689
ORF1ab/nsp3724T724delACC---11A.2.20.001689
ORF1ab/nsp3724T724TacCacT11A.23.10.000704
ORF1ab/nsp3724T724del2aCCa--11All0
ORF1ab/nsp3724T724HACcCAc11All0
ORF1ab/nsp3724T724TacCacT11AY.10.000396
ORF1ab/nsp3724T724IaCcaTc11AY.100.00053
ORF1ab/nsp3724T724TacCacT11AY.100.00053
ORF1ab/nsp3724T724IaCcaTc11AY.1000.000046
ORF1ab/nsp3724T724IaCcaTc11AY.1010.00049
ORF1ab/nsp3724T724AAccGcc11AY.1020.000027
ORF1ab/nsp3724T724AAccGcc11AY.1030.000006
ORF1ab/nsp3724T724del1acCac-11AY.1030.000006
ORF1ab/nsp3724T724TacCacT11AY.1110.000183
ORF1ab/nsp3724T724IaCcaTc11AY.1130.000142
ORF1ab/nsp3724T724TacCacT11AY.1140.000231
ORF1ab/nsp3724T724TacCacT11AY.1160.000287
ORF1ab/nsp3724T724TacCacT11AY.116.10.000311
ORF1ab/nsp3724T724IaCcaTc11AY.116.10.000311
ORF1ab/nsp3724T724IaCcaTc11AY.1180.000063
ORF1ab/nsp3724T724TacCacT11AY.120.000316
ORF1ab/nsp3724T724NaCcaAc11AY.120.10.000321
ORF1ab/nsp3724T724TacCacT11AY.120.2.10.000498
ORF1ab/nsp3724T724delACC---11AY.130.000161
ORF1ab/nsp3724T724IaCcaTc11AY.130.000161
ORF1ab/nsp3724T724delACC---11AY.250.000006
ORF1ab/nsp3724T724AAccGcc11AY.280.00189
ORF1ab/nsp3724T724IaCcaTc11AY.3.10.000085
ORF1ab/nsp3724T724TacCacT11AY.300.000396
ORF1ab/nsp3724T724IaCcaTc11AY.300.000396
ORF1ab/nsp3724T724TacCacT11AY.34.10.00051
ORF1ab/nsp3724T724TacCacT11AY.380.000499
ORF1ab/nsp3724T724TacCacT11AY.39.10.00004
ORF1ab/nsp3724T724IaCcaTc11AY.39.10.00004
ORF1ab/nsp3724T724delACC---11AY.4.2.10.000149
ORF1ab/nsp3724T724IaCcaTc11AY.4.2.10.000149
ORF1ab/nsp3724T724delACC---11AY.4.50.000107
ORF1ab/nsp3724T724IaCcaTc11AY.4.50.000107
ORF1ab/nsp3724T724TacCacT11AY.400.000964
ORF1ab/nsp3724T724IaCcaTc11AY.420.00004
ORF1ab/nsp3724T724AAccGcc11AY.430.000004
ORF1ab/nsp3724T724SaCcaGc11AY.440.000006
ORF1ab/nsp3724T724del1acCac-11AY.440.000006
ORF1ab/nsp3724T724IaCcaTc11AY.46.10.001027
ORF1ab/nsp3724T724NaCcaAc11AY.470.000031
ORF1ab/nsp3724T724delACC---11AY.5.30.000337
ORF1ab/nsp3724T724IaCcaTc11AY.540.000095
ORF1ab/nsp3724T724TacCacT11AY.550.000917
ORF1ab/nsp3724T724IaCcaTc11AY.550.000917
ORF1ab/nsp3724T724TacCacT11AY.560.001605
ORF1ab/nsp3724T724TacCacT11AY.570.000656
ORF1ab/nsp3724T724TacCacT11AY.60.000041
ORF1ab/nsp3724T724PAccCcc11AY.60.000041
ORF1ab/nsp3724T724TacCacT11AY.620.000436
ORF1ab/nsp3724T724TacCacT11AY.640.000595
ORF1ab/nsp3724T724delACC---11AY.670.000464
ORF1ab/nsp3724T724VACCGTA11AY.670.000464
ORF1ab/nsp3724T724AAccGcc11AY.680.000274
ORF1ab/nsp3724T724IaCcaTc11AY.680.000274
ORF1ab/nsp3724T724TacCacT11AY.710.000475
ORF1ab/nsp3724T724IaCcaTc11AY.740.000116
ORF1ab/nsp3724T724NaCcaAc11AY.75.10.00018
ORF1ab/nsp3724T724TacCacT11AY.760.004831
ORF1ab/nsp3724T724TacCacT11AY.770.001127
ORF1ab/nsp3724T724IaCcaTc11AY.790.001211
ORF1ab/nsp3724T724TacCacT11AY.80.000606
ORF1ab/nsp3724T724TacCacT11AY.800.001129
ORF1ab/nsp3724T724IaCcaTc11AY.850.000427
ORF1ab/nsp3724T724TacCacT11AY.870.000833
ORF1ab/nsp3724T724TacCacT11AY.880.000884
ORF1ab/nsp3724T724IaCcaTc11AY.9.10.000084
ORF1ab/nsp3724T724NaCcaAc11AY.9.10.000084
ORF1ab/nsp3724T724TacCacT11AY.9.20.000037
ORF1ab/nsp3724T724TacCacT11AY.900.000684
ORF1ab/nsp3724T724IaCcaTc11AY.930.000273
ORF1ab/nsp3724T724delACC---11AY.940.000443
ORF1ab/nsp3724T724TacCacT11AY.940.000443
ORF1ab/nsp3724T724TacCacT11AY.980.000079
ORF1ab/nsp3724T724AAccGcc11AY.98.10.000048
ORF1ab/nsp3724T724IaCcaTc11AY.98.10.000048
ORF1ab/nsp3724T724delACC---11AY.990.001049
ORF1ab/nsp3724T724TacCacT11AY.990.001049
ORF1ab/nsp3724T724TacCacT11AY.99.10.001553
ORF1ab/nsp3724T724TacCacT11AY.99.20.000092
ORF1ab/nsp3724T724IaCcaTc11AZ.30.00152
ORF1ab/nsp3724T724HACcCAc11B0.000128
ORF1ab/nsp3724T724NaCcaAc11B.10.000009
ORF1ab/nsp3724T724AAccGcc11B.1.10.000018
ORF1ab/nsp3724T724del1ACC-TT11B.1.10.000018
ORF1ab/nsp3724T724delACC---11B.1.10.000018
ORF1ab/nsp3724T724delACC---11B.1.1.1390.022727
ORF1ab/nsp3724T724delACC---11B.1.1.1420.017544
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1420.017544
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1530.001095
ORF1ab/nsp3724T724TacCacT11B.1.1.1530.001095
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1610.003534
ORF1ab/nsp3724T724IaCcaTc11B.1.1.1940.00495
ORF1ab/nsp3724T724TacCacT11B.1.1.1960.005714
ORF1ab/nsp3724T724TacCacT11B.1.1.2100.005714
ORF1ab/nsp3724T724AAccGcc11B.1.1.2200.001859
ORF1ab/nsp3724T724TacCacT11B.1.1.2260.005814
ORF1ab/nsp3724T724SAccTcc11B.1.1.2360.006897
ORF1ab/nsp3724T724IaCcaTc11B.1.1.2400.004695
ORF1ab/nsp3724T724TacCacT11B.1.1.2410.00207
ORF1ab/nsp3724T724IaCcaTc11B.1.1.2530.002506
ORF1ab/nsp3724T724TacCacT11B.1.1.270.00565
ORF1ab/nsp3724T724NaCcaAc11B.1.1.280.000311
ORF1ab/nsp3724T724TacCacT11B.1.1.2970.002237
ORF1ab/nsp3724T724TacCacT11B.1.1.2980.000862
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3060.000438
ORF1ab/nsp3724T724NaCcaAc11B.1.1.3070.002532
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3110.000358
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3160.000925
ORF1ab/nsp3724T724TacCacT11B.1.1.3260.001761
ORF1ab/nsp3724T724TacCacT11B.1.1.3390.010526
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3620.005618
ORF1ab/nsp3724T724IaCcaTc11B.1.1.3690.000446
ORF1ab/nsp3724T724IaCcaTc11B.1.1.370.000193
ORF1ab/nsp3724T724TacCacT11B.1.1.370.000193
ORF1ab/nsp3724T724PAccCcc11B.1.1.3710.010417
ORF1ab/nsp3724T724TacCacT11B.1.1.3790.03125
ORF1ab/nsp3724T724IaCcaTc11B.1.1.390.00051
ORF1ab/nsp3724T724delACC---11B.1.1.390.00051
ORF1ab/nsp3724T724delACC---11B.1.1.4090.002833
ORF1ab/nsp3724T724IaCcaTc11B.1.1.4190.007407
ORF1ab/nsp3724T724IaCcaTc11B.1.1.4280.009434
ORF1ab/nsp3724T724IaCcaTc11B.1.1.4400.011765
ORF1ab/nsp3724T724IaCcaTc11B.1.1.510.001718
ORF1ab/nsp3724T724IaCcaTc11B.1.1.5250.005464
ORF1ab/nsp3724T724IaCcaTc11B.1.1.5260.003546
ORF1ab/nsp3724T724TacCacT11B.1.1.5280.004808
ORF1ab/nsp3724T724IaCcaTc11B.1.1.570.011494
ORF1ab/nsp3724T724IaCcaTc11B.1.1.630.000386
ORF1ab/nsp3724T724PAccCcc11B.1.1.70.000001
ORF1ab/nsp3724T724NaCcaAc11B.1.1.70.000001
ORF1ab/nsp3724T724TacCacT11B.1.1.980.018519
ORF1ab/nsp3724T724TacCacT11B.1.1040.00369
ORF1ab/nsp3724T724IaCcaTc11B.1.1260.001276
ORF1ab/nsp3724T724TacCacT11B.1.1390.000733
ORF1ab/nsp3724T724delACC---11B.1.1490.003425
ORF1ab/nsp3724T724delACC---11B.1.1570.002985
ORF1ab/nsp3724T724delACC---11B.1.1600.000031
ORF1ab/nsp3724T724TacCacT11B.1.160.160.000929
ORF1ab/nsp3724T724IaCcaTc11B.1.1640.014925
ORF1ab/nsp3724T724TacCacT11B.1.177.120.000152
ORF1ab/nsp3724T724delACC---11B.1.177.160.000664
ORF1ab/nsp3724T724delACC---11B.1.177.170.000821
ORF1ab/nsp3724T724TacCacT11B.1.177.170.000821
ORF1ab/nsp3724T724IaCcaTc11B.1.177.210.000076
ORF1ab/nsp3724T724TacCacT11B.1.177.240.001295
ORF1ab/nsp3724T724IaCcaTc11B.1.177.310.011494
ORF1ab/nsp3724T724TacCacT11B.1.177.330.001645
ORF1ab/nsp3724T724TacCacT11B.1.177.350.000691
ORF1ab/nsp3724T724delACC---11B.1.177.500.004695
ORF1ab/nsp3724T724IaCcaTc11B.1.177.520.001757
ORF1ab/nsp3724T724TacCacT11B.1.177.520.001757
ORF1ab/nsp3724T724delACC---11B.1.177.540.000606
ORF1ab/nsp3724T724TacCacA11B.1.177.560.000668
ORF1ab/nsp3724T724IaCcaTc11B.1.177.570.000281
ORF1ab/nsp3724T724TacCacT11B.1.177.570.000281
ORF1ab/nsp3724T724IaCcaTc11B.1.177.60.000977
ORF1ab/nsp3724T724TacCacT11B.1.177.600.000218
ORF1ab/nsp3724T724delACC---11B.1.177.630.002703
ORF1ab/nsp3724T724delACC---11B.1.177.70.000165
ORF1ab/nsp3724T724TacCacT11B.1.177.70.000165
ORF1ab/nsp3724T724TacCacT11B.1.177.750.001041
ORF1ab/nsp3724T724IaCcaTc11B.1.177.750.001041
ORF1ab/nsp3724T724IaCcaTc11B.1.177.810.000189
ORF1ab/nsp3724T724IaCcaTc11B.1.177.820.000477
ORF1ab/nsp3724T724IaCcaTc11B.1.177.860.000183
ORF1ab/nsp3724T724delACC---11B.1.177.870.000728
ORF1ab/nsp3724T724TacCacT11B.1.1920.009259
ORF1ab/nsp3724T724delACC---11B.1.20.000009
ORF1ab/nsp3724T724NaCcaAc11B.1.20.000009
ORF1ab/nsp3724T724SAccTcc11B.1.20.000009
ORF1ab/nsp3724T724TacCacT11B.1.2010.005682
ORF1ab/nsp3724T724IaCcaTc11B.1.2060.000816
ORF1ab/nsp3724T724TacCacT11B.1.2060.000816
ORF1ab/nsp3724T724delACC---11B.1.2100.002132
ORF1ab/nsp3724T724IaCcaTc11B.1.221.20.004016
ORF1ab/nsp3724T724TacCacT11B.1.2370.004975
ORF1ab/nsp3724T724IaCcaTc11B.1.258.110.000396
ORF1ab/nsp3724T724TacCacT11B.1.258.170.000104
ORF1ab/nsp3724T724IaCcaTc11B.1.258.170.000104
ORF1ab/nsp3724T724TacCacT11B.1.264.10.047619
ORF1ab/nsp3724T724IaCcaTc11B.1.264.10.047619
ORF1ab/nsp3724T724TacCacT11B.1.2790.000514
ORF1ab/nsp3724T724IaCcaTc11B.1.2810.021739
ORF1ab/nsp3724T724IaCcaTc11B.1.3140.007519
ORF1ab/nsp3724T724delACC---11B.1.3190.003049
ORF1ab/nsp3724T724IaCcaTc11B.1.3190.003049
ORF1ab/nsp3724T724IaCcaTc11B.1.3200.001245
ORF1ab/nsp3724T724IaCcaTc11B.1.3400.004292
ORF1ab/nsp3724T724IaCcaTc11B.1.3490.000715
ORF1ab/nsp3724T724TacCacT11B.1.36.180.00042
ORF1ab/nsp3724T724TacCacT11B.1.36.290.000517
ORF1ab/nsp3724T724TacCacT11B.1.36.360.000602
ORF1ab/nsp3724T724delACC---11B.1.36.380.001642
ORF1ab/nsp3724T724IaCcaTc11B.1.3770.004566
ORF1ab/nsp3724T724TacCacT11B.1.3960.000706
ORF1ab/nsp3724T724del1aCca-c11B.1.4000.000429
ORF1ab/nsp3724T724TacCacT11B.1.4000.000429
ORF1ab/nsp3724T724delACC---11B.1.4090.000781
ORF1ab/nsp3724T724TacCacT11B.1.4110.003704
ORF1ab/nsp3724T724del2aCCa--11B.1.4150.014286
ORF1ab/nsp3724T724IaCcaTc11B.1.4180.015873
ORF1ab/nsp3724T724AAccGcc11B.1.4290.000024
ORF1ab/nsp3724T724IaCcaTc11B.1.4320.011236
ORF1ab/nsp3724T724TacCacT11B.1.4560.003268
ORF1ab/nsp3724T724TacCacT11B.1.4590.004082
ORF1ab/nsp3724T724IaCcaTc11B.1.466.10.007194
ORF1ab/nsp3724T724IaCcaTc11B.1.466.20.000391
ORF1ab/nsp3724T724TacCacT11B.1.466.20.000391
ORF1ab/nsp3724T724TacCacT11B.1.4700.001404
ORF1ab/nsp3724T724TacCacT11B.1.4740.001901
ORF1ab/nsp3724T724IaCcaTc11B.1.5010.007353
ORF1ab/nsp3724T724IaCcaTc11B.1.5170.000427
ORF1ab/nsp3724T724TacCacT11B.1.5170.000427
ORF1ab/nsp3724T724IaCcaTc11B.1.5240.001406
ORF1ab/nsp3724T724TacCacT11B.1.5250.000113
ORF1ab/nsp3724T724TacCacT11B.1.5270.003704
ORF1ab/nsp3724T724IaCcaTc11B.1.5300.007143
ORF1ab/nsp3724T724TacCacT11B.1.5370.02
ORF1ab/nsp3724T724TacCacT11B.1.5460.003704
ORF1ab/nsp3724T724IaCcaTc11B.1.5610.000397
ORF1ab/nsp3724T724IaCcaTc11B.1.5640.000426
ORF1ab/nsp3724T724IaCcaTc11B.1.5760.000907
ORF1ab/nsp3724T724IaCcaTc11B.1.5820.000491
ORF1ab/nsp3724T724TacCacT11B.1.5820.000491
ORF1ab/nsp3724T724IaCcaTc11B.1.5880.00091
ORF1ab/nsp3724T724delACC---11B.1.617.10.000129
ORF1ab/nsp3724T724IaCcaTc11B.1.617.10.000129
ORF1ab/nsp3724T724IaCcaTc11B.1.617.30.002985
ORF1ab/nsp3724T724TacCacT11B.1.6190.000871
ORF1ab/nsp3724T724IaCcaTc11B.1.6230.000536
ORF1ab/nsp3724T724IaCcaTc11B.1.6330.041667
ORF1ab/nsp3724T724delACC---11B.150.017544
ORF1ab/nsp3724T724TacCacT11B.30.000831
ORF1ab/nsp3724T724delACC---11B.340.013699
ORF1ab/nsp3724T724TacCacT11B.400.000364
ORF1ab/nsp3724T724TacCacT11C.1.20.004255
ORF1ab/nsp3724T724TacCacT11C.36.30.000567
ORF1ab/nsp3724T724IaCcaTc11C.370.000116
ORF1ab/nsp3724T724IaCcaTc11D.20.000075
ORF1ab/nsp3724T724IaCcaTc11K.30.006173
ORF1ab/nsp3724T724TacCacT11N.10.016949
ORF1ab/nsp3724T724IaCcaTc11N.40.004255
ORF1ab/nsp3724T724TacCacT11N.50.001767
ORF1ab/nsp3724T724IaCcaTc11N.90.005952
ORF1ab/nsp3724T724TacCacT11N.90.005952
ORF1ab/nsp3724T724IaCcaTc11P.1.10.000318
ORF1ab/nsp3724T724delACC---11P.1.10.000318
ORF1ab/nsp3724T724IaCcaTc11P.1.120.000484
ORF1ab/nsp3724T724NaCcaAc11P.1.140.000048
ORF1ab/nsp3724T724IaCcaTc11P.1.150.000232
ORF1ab/nsp3724T724TacCacT11P.1.170.000162
ORF1ab/nsp3724T724TacCacT11P.1.20.001156
ORF1ab/nsp3724T724IaCcaTc11Q.40.000455
ORF1ab/nsp3724T724TacCacT11Q.40.000455
ORF1ab/nsp3724T724IaCcaTc11Q.80.000165
ORF1ab/nsp3724T724TacCacT11Y.10.012821