CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 723 & Codon = cTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3723P723LP1541LnonsyncCtcTt7417390.9973014886-4888

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3723P723LcCtcTt739741All0.000141
ORF1ab/nsp3723P723LcCtcTt306306AY.50.006319
ORF1ab/nsp3723P723LcCtcTt120120B.1.1.70.000107
ORF1ab/nsp3723P723LcCtcTt7575AY.40.000117
ORF1ab/nsp3723P723LcCtcTt3940B.1.617.20.000147
ORF1ab/nsp3723P723LcCtcTt1515AY.250.00009
ORF1ab/nsp3723P723LcCtcTt1212AY.30.000119
ORF1ab/nsp3723P723LcCtcTt1010AY.440.000061
ORF1ab/nsp3723P723LcCtcTt88AY.420.000322
ORF1ab/nsp3723P723LcCtcTt77AY.1030.000043
ORF1ab/nsp3723P723LcCtcTt77Q.30.001015
ORF1ab/nsp3723P723LcCtcTt66AY.1020.000159
ORF1ab/nsp3723P723LcCtcTt55AY.1110.000916
ORF1ab/nsp3723P723LcCtcTt55AY.1190.000177
ORF1ab/nsp3723P723LcCtcTt55AY.140.00044
ORF1ab/nsp3723P723LcCtcTt55AY.430.000022
ORF1ab/nsp3723P723LcCtcTt55B.10.000046
ORF1ab/nsp3723P723LcCtcTt55B.1.20.000044
ORF1ab/nsp3723P723LcCtcTt55D.20.000375
ORF1ab/nsp3723P723LcCtcTt44AY.39.10.000158
ORF1ab/nsp3723P723LcCtcTt44AY.98.10.000194
ORF1ab/nsp3723P723LcCtcTt44B.1.1600.000125
ORF1ab/nsp3723P723LcCtcTt44P.10.000063
ORF1ab/nsp3723P723LcCtcTt33AY.980.000237
ORF1ab/nsp3723P723LcCtcTt33B.1.1.2140.000166
ORF1ab/nsp3723P723LcCtcTt33B.1.1770.00004
ORF1ab/nsp3723P723LcCtcTt33B.1.177.750.003122
ORF1ab/nsp3723P723LcCtcTt33B.1.177.810.000568
ORF1ab/nsp3723P723LcCtcTt22AY.1170.000169
ORF1ab/nsp3723P723LcCtcTt22AY.380.000999
ORF1ab/nsp3723P723LcCtcTt22AY.4.20.000043
ORF1ab/nsp3723P723LcCtcTt22AY.700.000417
ORF1ab/nsp3723P723LcCtcTt22AY.90.000135
ORF1ab/nsp3723P723LcCtcTt12B0.000128
ORF1ab/nsp3723P723LcCtcTt22B.1.10.000036
ORF1ab/nsp3723P723LcCtcTt22B.1.1.2790.002242
ORF1ab/nsp3723P723LcCtcTt22B.1.4290.000047
ORF1ab/nsp3723P723LcCtcTt22Q.10.000253
ORF1ab/nsp3723P723LcCtcTt11AY.10.000396
ORF1ab/nsp3723P723LcCtcTt11AY.1060.000335
ORF1ab/nsp3723P723LcCtcTt11AY.1180.000063
ORF1ab/nsp3723P723LcCtcTt11AY.1200.000037
ORF1ab/nsp3723P723LcCtcTt11AY.120.10.000321
ORF1ab/nsp3723P723LcCtcTt11AY.130.000161
ORF1ab/nsp3723P723LcCtcTt11AY.200.000039
ORF1ab/nsp3723P723LcCtcTt11AY.290.000016
ORF1ab/nsp3723P723LcCtcTt11AY.3.10.000085
ORF1ab/nsp3723P723LcCtcTt11AY.330.000067
ORF1ab/nsp3723P723LcCtcTt11AY.350.000233
ORF1ab/nsp3723P723LcCtcTt11AY.390.000025
ORF1ab/nsp3723P723LcCtcTt11AY.39.1.10.000725
ORF1ab/nsp3723P723LcCtcTt11AY.4.2.10.000149
ORF1ab/nsp3723P723LcCtcTt11AY.5.40.000277
ORF1ab/nsp3723P723LcCtcTt11AY.540.000095
ORF1ab/nsp3723P723LcCtcTt11AY.550.000917
ORF1ab/nsp3723P723LcCtcTt11AY.60.000041
ORF1ab/nsp3723P723LcCtcTt11AY.880.000884
ORF1ab/nsp3723P723LcCtcTt11AY.910.00073
ORF1ab/nsp3723P723LcCtcTt11B.1.1.280.000311
ORF1ab/nsp3723P723LcCtcTt11B.1.1.2890.002083
ORF1ab/nsp3723P723LcCtcTt11B.1.1.4190.007407
ORF1ab/nsp3723P723LcCtcTt11B.1.1.5190.00004
ORF1ab/nsp3723P723LcCtcTt11B.1.177.160.000664
ORF1ab/nsp3723P723LcCtcTt11B.1.177.40.000211
ORF1ab/nsp3723P723LcCtcTt11B.1.177.410.0025
ORF1ab/nsp3723P723LcCtcTt11B.1.1820.007246
ORF1ab/nsp3723P723LcCtcTt11B.1.2210.000071
ORF1ab/nsp3723P723LcCtcTt11B.1.2320.000537
ORF1ab/nsp3723P723LcCtcTt11B.1.2340.000132
ORF1ab/nsp3723P723LcCtcTt11B.1.2390.001221
ORF1ab/nsp3723P723LcCtcTt11B.1.2430.00007
ORF1ab/nsp3723P723LcCtcTt11B.1.3110.000275
ORF1ab/nsp3723P723LcCtcTt11B.1.3510.00003
ORF1ab/nsp3723P723LcCtcTt11B.1.36.170.000494
ORF1ab/nsp3723P723LcCtcTt11B.1.3690.000285
ORF1ab/nsp3723P723LcCtcTt11B.1.4000.000429
ORF1ab/nsp3723P723LcCtcTt11B.1.4270.00005
ORF1ab/nsp3723P723LcCtcTt11B.1.438.10.000107
ORF1ab/nsp3723P723LcCtcTt11B.1.4530.003236
ORF1ab/nsp3723P723LcCtcTt11B.1.5250.000113
ORF1ab/nsp3723P723LcCtcTt11B.1.5760.000907
ORF1ab/nsp3723P723LcCtcTt11B.1.5820.000491
ORF1ab/nsp3723P723LcCtcTt11B.1.5950.000261
ORF1ab/nsp3723P723LcCtcTt11B.1.617.10.000129
ORF1ab/nsp3723P723LcCtcTt11B.30.000831
ORF1ab/nsp3723P723LcCtcTt11P.1.170.000162
ORF1ab/nsp3723P723LcCtcTt11R.10.00009