CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 707

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3707I707VI1525VnonsynAtaGta6217621714838-4840
ORF1ab/nsp3707I707MI1525MnonsynatAatG21021014838-4840
ORF1ab/nsp3707I707TI1525TnonsynaTaaCa19319314838-4840
ORF1ab/nsp3707I707delI1525deldelATA---767614838-4840
ORF1ab/nsp3707I707II1525IsynatAatT32210.656254838-4840
ORF1ab/nsp3707I707II1525IsynatAatC32110.343754838-4840
ORF1ab/nsp3707I707KI1525KnonsynaTaaAa242414838-4840
ORF1ab/nsp3707I707LI1525LnonsynAtaTta24130.5416674838-4840
ORF1ab/nsp3707I707LI1525LnonsynAtaCta24110.4583334838-4840
ORF1ab/nsp3707I707RI1525RnonsynaTaaGa141414838-4840
ORF1ab/nsp3707I707PI1525PnonsynATaCCa9914838-4840
ORF1ab/nsp3707I707del1I1525del1delAta-ta430.754838-4840
ORF1ab/nsp3707I707del1I1525del1delAtACt-410.254838-4840
ORF1ab/nsp3707I707EI1525EnonsynATaGAa3314838-4840
ORF1ab/nsp3707I707AI1525AnonsynATaGCa1114838-4840

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3707I707VAtaGta62176217All0.001189
ORF1ab/nsp3707I707VAtaGta51615161AY.690.963412
ORF1ab/nsp3707I707MatAatG210210All0.00004
ORF1ab/nsp3707I707TaTaaCa193193All0.000037
ORF1ab/nsp3707I707VAtaGta191191AY.40.000297
ORF1ab/nsp3707I707VAtaGta162162B.1.1.70.000145
ORF1ab/nsp3707I707MatAatG9595AY.40.000148
ORF1ab/nsp3707I707VAtaGta8181AY.130.013039
ORF1ab/nsp3707I707delATA---7676All0.000015
ORF1ab/nsp3707I707MatAatG7575B.1.1.70.000067
ORF1ab/nsp3707I707VAtaGta5959AY.440.000359
ORF1ab/nsp3707I707VAtaGta5252B.1.617.20.000196
ORF1ab/nsp3707I707TaTaaCa4343AY.9.10.0036
ORF1ab/nsp3707I707VAtaGta4242B.1.1.2220.008568
ORF1ab/nsp3707I707VAtaGta4040B.1.20.000352
ORF1ab/nsp3707I707VAtaGta3535AY.250.000211
ORF1ab/nsp3707I707VAtaGta3333AY.4.20.000716
ORF1ab/nsp3707I707IatAatT2132All0.000004
ORF1ab/nsp3707I707IatAatC1132All0.000002
ORF1ab/nsp3707I707VAtaGta2828P.1.140.001338
ORF1ab/nsp3707I707delATA---2626B.1.1.70.000023
ORF1ab/nsp3707I707VAtaGta2525AY.30.000249
ORF1ab/nsp3707I707TaTaaCa2525AY.440.000152
ORF1ab/nsp3707I707KaTaaAa2424All0.000005
ORF1ab/nsp3707I707LAtaTta1324All0.000002
ORF1ab/nsp3707I707LAtaCta1124All0.000002
ORF1ab/nsp3707I707VAtaGta2121B.130.954545
ORF1ab/nsp3707I707VAtaGta1919AY.290.0003
ORF1ab/nsp3707I707VAtaGta1919B.10.000174
ORF1ab/nsp3707I707TaTaaCa1818AY.1200.000669
ORF1ab/nsp3707I707VAtaGta1818B.1.619.10.011546
ORF1ab/nsp3707I707VAtaGta1717AY.430.000075
ORF1ab/nsp3707I707VAtaGta1515AY.1030.000093
ORF1ab/nsp3707I707RaTaaGa1414All0.000003
ORF1ab/nsp3707I707VAtaGta1414B.1.4290.000329
ORF1ab/nsp3707I707TaTaaCa1313AY.40.00002
ORF1ab/nsp3707I707KaTaaAa1313B.1.4290.000306
ORF1ab/nsp3707I707VAtaGta1111AY.260.000311
ORF1ab/nsp3707I707VAtaGta1111B.1.177.860.002018
ORF1ab/nsp3707I707TaTaaCa1010B.1.1.2410.020704
ORF1ab/nsp3707I707VAtaGta1010P.10.000158
ORF1ab/nsp3707I707PATaCCa99All0.000002
ORF1ab/nsp3707I707VAtaGta99B.1.360.001313
ORF1ab/nsp3707I707TaTaaCa88B.1.1.70.000007
ORF1ab/nsp3707I707VAtaGta88B.1.1770.000105
ORF1ab/nsp3707I707TaTaaCa88B.1.617.20.00003
ORF1ab/nsp3707I707VAtaGta77AY.1020.000186
ORF1ab/nsp3707I707LAtaTta56AY.250.00003
ORF1ab/nsp3707I707LAtaCta16AY.250.000006
ORF1ab/nsp3707I707VAtaGta66AY.390.000148
ORF1ab/nsp3707I707IatAatT66AY.970.010204
ORF1ab/nsp3707I707VAtaGta66B.1.10.000109
ORF1ab/nsp3707I707PATaCCa66B.1.1.70.000005
ORF1ab/nsp3707I707LAtaTta46B.1.1.70.000004
ORF1ab/nsp3707I707LAtaCta26B.1.1.70.000002
ORF1ab/nsp3707I707LAtaCta55AY.1170.000423
ORF1ab/nsp3707I707TaTaaCa55AY.1210.000677
ORF1ab/nsp3707I707IatAatC55AY.40.000008
ORF1ab/nsp3707I707MatAatG55AY.440.00003
ORF1ab/nsp3707I707TaTaaCa55B.10.000046
ORF1ab/nsp3707I707VAtaGta55B.1.9.20.5
ORF1ab/nsp3707I707del1Ata-ta34All0.000001
ORF1ab/nsp3707I707del1AtACt-14All0
ORF1ab/nsp3707I707VAtaGta44AY.1000.000184
ORF1ab/nsp3707I707VAtaGta44AY.200.000155
ORF1ab/nsp3707I707TaTaaCa44AY.4.20.000087
ORF1ab/nsp3707I707VAtaGta44AY.460.000416
ORF1ab/nsp3707I707TaTaaCa44AY.470.000124
ORF1ab/nsp3707I707MatAatG44AY.930.001092
ORF1ab/nsp3707I707TaTaaCa44AY.99.20.000369
ORF1ab/nsp3707I707VAtaGta44B.1.177.670.030534
ORF1ab/nsp3707I707VAtaGta44B.1.5260.000094
ORF1ab/nsp3707I707MatAatG44B.1.617.20.000015
ORF1ab/nsp3707I707EATaGAa33All0.000001
ORF1ab/nsp3707I707TaTaaCa33AY.30.00003
ORF1ab/nsp3707I707TaTaaCa33AY.3.10.000256
ORF1ab/nsp3707I707VAtaGta33AY.330.0002
ORF1ab/nsp3707I707VAtaGta33AY.46.30.002801
ORF1ab/nsp3707I707TaTaaCa33AY.46.60.000217
ORF1ab/nsp3707I707VAtaGta33AY.470.000093
ORF1ab/nsp3707I707VAtaGta33AY.60.000123
ORF1ab/nsp3707I707RaTaaGa33B.10.000027
ORF1ab/nsp3707I707delATA---33B.10.000027
ORF1ab/nsp3707I707MatAatG33B.10.000027
ORF1ab/nsp3707I707TaTaaCa33B.1.10.000054
ORF1ab/nsp3707I707IatAatT33B.1.1.70.000003
ORF1ab/nsp3707I707delATA---33B.1.1770.00004
ORF1ab/nsp3707I707VAtaGta33B.1.177.150.001893
ORF1ab/nsp3707I707TaTaaCa33B.1.20.000026
ORF1ab/nsp3707I707VAtaGta33B.1.2430.000209
ORF1ab/nsp3707I707VAtaGta33B.1.3510.000089
ORF1ab/nsp3707I707KaTaaAa33B.1.5960.000261
ORF1ab/nsp3707I707VAtaGta33C.36.30.001702
ORF1ab/nsp3707I707EATaGAa220.111111
ORF1ab/nsp3707I707delATA---220.111111
ORF1ab/nsp3707I707TaTaaCa22AY.1030.000012
ORF1ab/nsp3707I707MatAatG22AY.1030.000012
ORF1ab/nsp3707I707VAtaGta22AY.1060.00067
ORF1ab/nsp3707I707TaTaaCa22AY.240.000862
ORF1ab/nsp3707I707MatAatG22AY.250.000012
ORF1ab/nsp3707I707MatAatG22AY.30.00002
ORF1ab/nsp3707I707IatAatT22AY.3.10.000171
ORF1ab/nsp3707I707VAtaGta22AY.39.10.000079
ORF1ab/nsp3707I707LAtaTta22AY.40.000003
ORF1ab/nsp3707I707delATA---22AY.40.000003
ORF1ab/nsp3707I707VAtaGta22AY.4.50.000215
ORF1ab/nsp3707I707VAtaGta22AY.420.00008
ORF1ab/nsp3707I707TaTaaCa22AY.430.000009
ORF1ab/nsp3707I707MatAatG22AY.430.000009
ORF1ab/nsp3707I707TaTaaCa22AY.460.000208
ORF1ab/nsp3707I707VAtaGta22AY.50.000041
ORF1ab/nsp3707I707VAtaGta22AY.610.00021
ORF1ab/nsp3707I707TaTaaCa22AY.750.000112
ORF1ab/nsp3707I707VAtaGta22AY.99.10.003106
ORF1ab/nsp3707I707VAtaGta22AY.99.20.000184
ORF1ab/nsp3707I707IatAatT22B.1.10.000036
ORF1ab/nsp3707I707TaTaaCa22B.1.1.3890.012121
ORF1ab/nsp3707I707VAtaGta22B.1.1.5190.000079
ORF1ab/nsp3707I707RaTaaGa22B.1.1.70.000002
ORF1ab/nsp3707I707VAtaGta22B.1.177.320.002699
ORF1ab/nsp3707I707VAtaGta22B.1.177.790.004684
ORF1ab/nsp3707I707RaTaaGa22B.1.20.000018
ORF1ab/nsp3707I707VAtaGta22B.1.2210.000142
ORF1ab/nsp3707I707TaTaaCa22B.1.2400.000431
ORF1ab/nsp3707I707delATA---22B.1.360.000292
ORF1ab/nsp3707I707VAtaGta22B.1.3610.002577
ORF1ab/nsp3707I707VAtaGta22B.1.4270.000101
ORF1ab/nsp3707I707RaTaaGa22B.1.4290.000047
ORF1ab/nsp3707I707KaTaaAa22B.1.617.20.000008
ORF1ab/nsp3707I707VAtaGta22B.1.6190.001742
ORF1ab/nsp3707I707delATA---22B.1.6190.001742
ORF1ab/nsp3707I707VAtaGta22B.1.6370.000146
ORF1ab/nsp3707I707IatAatT22C.1.20.008511
ORF1ab/nsp3707I707VAtaGta22D.20.00015
ORF1ab/nsp3707I707delATA---22P.10.000032
ORF1ab/nsp3707I707delATA---11A.2.20.001689
ORF1ab/nsp3707I707TaTaaCa11A.60.005128
ORF1ab/nsp3707I707AATaGCa11All0
ORF1ab/nsp3707I707IatAatT11AY.1020.000027
ORF1ab/nsp3707I707LAtaCta11AY.1030.000006
ORF1ab/nsp3707I707delATA---11AY.1080.001103
ORF1ab/nsp3707I707VAtaGta11AY.116.10.000311
ORF1ab/nsp3707I707VAtaGta11AY.1170.000085
ORF1ab/nsp3707I707MatAatG11AY.120.000316
ORF1ab/nsp3707I707VAtaGta11AY.1200.000037
ORF1ab/nsp3707I707MatAatG11AY.200.000039
ORF1ab/nsp3707I707TaTaaCa11AY.250.000006
ORF1ab/nsp3707I707RaTaaGa11AY.250.000006
ORF1ab/nsp3707I707TaTaaCa11AY.260.000028
ORF1ab/nsp3707I707TaTaaCa11AY.290.000016
ORF1ab/nsp3707I707MatAatG11AY.290.000016
ORF1ab/nsp3707I707KaTaaAa11AY.30.00001
ORF1ab/nsp3707I707VAtaGta11AY.3.10.000085
ORF1ab/nsp3707I707MatAatG11AY.300.000396
ORF1ab/nsp3707I707VAtaGta11AY.340.000097
ORF1ab/nsp3707I707TaTaaCa11AY.340.000097
ORF1ab/nsp3707I707VAtaGta11AY.360.000148
ORF1ab/nsp3707I707VAtaGta11AY.380.000499
ORF1ab/nsp3707I707MatAatG11AY.390.000025
ORF1ab/nsp3707I707TaTaaCa11AY.390.000025
ORF1ab/nsp3707I707VAtaGta11AY.4.10.000737
ORF1ab/nsp3707I707delATA---11AY.4.50.000107
ORF1ab/nsp3707I707IatAatC11AY.430.000004
ORF1ab/nsp3707I707delATA---11AY.430.000004
ORF1ab/nsp3707I707KaTaaAa11AY.430.000004
ORF1ab/nsp3707I707RaTaaGa11AY.440.000006
ORF1ab/nsp3707I707delATA---11AY.440.000006
ORF1ab/nsp3707I707KaTaaAa11AY.460.000104
ORF1ab/nsp3707I707VAtaGta11AY.46.20.000635
ORF1ab/nsp3707I707VAtaGta11AY.490.003195
ORF1ab/nsp3707I707VAtaGta11AY.5.40.000277
ORF1ab/nsp3707I707VAtaGta11AY.540.000095
ORF1ab/nsp3707I707VAtaGta11AY.550.000917
ORF1ab/nsp3707I707MatAatG11AY.60.000041
ORF1ab/nsp3707I707delATA---11AY.670.000464
ORF1ab/nsp3707I707AATaGCa11AY.690.000187
ORF1ab/nsp3707I707VAtaGta11AY.70.000196
ORF1ab/nsp3707I707VAtaGta11AY.720.001361
ORF1ab/nsp3707I707MatAatG11AY.730.000665
ORF1ab/nsp3707I707IatAatC11AY.740.000116
ORF1ab/nsp3707I707VAtaGta11AY.750.000056
ORF1ab/nsp3707I707VAtaGta11AY.760.004831
ORF1ab/nsp3707I707delATA---11AY.810.001992
ORF1ab/nsp3707I707MatAatG11AY.90.000068
ORF1ab/nsp3707I707MatAatG11AY.9.10.000084
ORF1ab/nsp3707I707delATA---11AY.940.000443
ORF1ab/nsp3707I707VAtaGta11AY.980.000079
ORF1ab/nsp3707I707TaTaaCa11AY.980.000079
ORF1ab/nsp3707I707del1AtACt-11AY.990.001049
ORF1ab/nsp3707I707VAtaGta11B0.000128
ORF1ab/nsp3707I707TaTaaCa11B0.000128
ORF1ab/nsp3707I707IatAatC11B.10.000009
ORF1ab/nsp3707I707EATaGAa11B.1.10.000018
ORF1ab/nsp3707I707TaTaaCa11B.1.1.10.000327
ORF1ab/nsp3707I707PATaCCa11B.1.1.10.000327
ORF1ab/nsp3707I707VAtaGta11B.1.1.100.001115
ORF1ab/nsp3707I707delATA---11B.1.1.1390.022727
ORF1ab/nsp3707I707delATA---11B.1.1.1420.017544
ORF1ab/nsp3707I707RaTaaGa11B.1.1.2910.000742
ORF1ab/nsp3707I707IatAatT11B.1.1.3050.003861
ORF1ab/nsp3707I707delATA---11B.1.1.3110.000358
ORF1ab/nsp3707I707MatAatG11B.1.1.3710.010417
ORF1ab/nsp3707I707MatAatG11B.1.1.3720.000689
ORF1ab/nsp3707I707delATA---11B.1.1.4090.002833
ORF1ab/nsp3707I707VAtaGta11B.1.1.4160.000905
ORF1ab/nsp3707I707delATA---11B.1.1.5190.00004
ORF1ab/nsp3707I707TaTaaCa11B.1.1.5190.00004
ORF1ab/nsp3707I707IatAatC11B.1.1.630.000386
ORF1ab/nsp3707I707KaTaaAa11B.1.1.70.000001
ORF1ab/nsp3707I707del1Ata-ta11B.1.1.70.000001
ORF1ab/nsp3707I707KaTaaAa11B.1.1490.003425
ORF1ab/nsp3707I707delATA---11B.1.1570.002985
ORF1ab/nsp3707I707delATA---11B.1.1600.000031
ORF1ab/nsp3707I707delATA---11B.1.160.70.002079
ORF1ab/nsp3707I707MatAatG11B.1.1770.000013
ORF1ab/nsp3707I707TaTaaCa11B.1.1770.000013
ORF1ab/nsp3707I707IatAatT11B.1.1770.000013
ORF1ab/nsp3707I707LAtaCta11B.1.1770.000013
ORF1ab/nsp3707I707delATA---11B.1.177.110.001698
ORF1ab/nsp3707I707VAtaGta11B.1.177.160.000664
ORF1ab/nsp3707I707delATA---11B.1.177.160.000664
ORF1ab/nsp3707I707MatAatG11B.1.177.200.001517
ORF1ab/nsp3707I707TaTaaCa11B.1.177.320.00135
ORF1ab/nsp3707I707del1Ata-ta11B.1.177.440.000519
ORF1ab/nsp3707I707delATA---11B.1.177.500.004695
ORF1ab/nsp3707I707VAtaGta11B.1.177.570.000281
ORF1ab/nsp3707I707delATA---11B.1.177.570.000281
ORF1ab/nsp3707I707delATA---11B.1.177.580.001332
ORF1ab/nsp3707I707delATA---11B.1.177.630.002703
ORF1ab/nsp3707I707delATA---11B.1.177.70.000165
ORF1ab/nsp3707I707VAtaGta11B.1.177.730.000566
ORF1ab/nsp3707I707delATA---11B.1.177.810.000189
ORF1ab/nsp3707I707delATA---11B.1.177.870.000728
ORF1ab/nsp3707I707delATA---11B.1.20.000009
ORF1ab/nsp3707I707del1Ata-ta11B.1.20.000009
ORF1ab/nsp3707I707IatAatT11B.1.20.000009
ORF1ab/nsp3707I707VAtaGta11B.1.214.20.0006
ORF1ab/nsp3707I707delATA---11B.1.2210.000071
ORF1ab/nsp3707I707IatAatT11B.1.2340.000132
ORF1ab/nsp3707I707VAtaGta11B.1.2400.000216
ORF1ab/nsp3707I707LAtaCta11B.1.2400.000216
ORF1ab/nsp3707I707PATaCCa11B.1.2400.000216
ORF1ab/nsp3707I707PATaCCa11B.1.2430.00007
ORF1ab/nsp3707I707TaTaaCa11B.1.2430.00007
ORF1ab/nsp3707I707delATA---11B.1.2580.000067
ORF1ab/nsp3707I707KaTaaAa11B.1.2580.000067
ORF1ab/nsp3707I707delATA---11B.1.3190.003049
ORF1ab/nsp3707I707LAtaTta11B.1.3240.001605
ORF1ab/nsp3707I707RaTaaGa11B.1.3320.003497
ORF1ab/nsp3707I707TaTaaCa11B.1.3380.008621
ORF1ab/nsp3707I707delATA---11B.1.3510.00003
ORF1ab/nsp3707I707MatAatG11B.1.3510.00003
ORF1ab/nsp3707I707VAtaGta11B.1.36.190.009259
ORF1ab/nsp3707I707VAtaGta11B.1.36.260.002857
ORF1ab/nsp3707I707VAtaGta11B.1.36.290.000517
ORF1ab/nsp3707I707VAtaGta11B.1.4160.001269
ORF1ab/nsp3707I707VAtaGta11B.1.416.10.001563
ORF1ab/nsp3707I707MatAatG11B.1.4290.000024
ORF1ab/nsp3707I707IatAatC11B.1.4290.000024
ORF1ab/nsp3707I707TaTaaCa11B.1.4290.000024
ORF1ab/nsp3707I707IatAatC11B.1.5950.000261
ORF1ab/nsp3707I707VAtaGta11B.1.5960.000087
ORF1ab/nsp3707I707TaTaaCa11B.1.6090.000479
ORF1ab/nsp3707I707delATA---11B.1.617.10.000129
ORF1ab/nsp3707I707LAtaTta11B.1.617.20.000004
ORF1ab/nsp3707I707delATA---11B.1.617.20.000004
ORF1ab/nsp3707I707RaTaaGa11B.1.619.10.000641
ORF1ab/nsp3707I707delATA---11B.150.017544
ORF1ab/nsp3707I707TaTaaCa11B.550.00295
ORF1ab/nsp3707I707VAtaGta11B.6.60.000889
ORF1ab/nsp3707I707VAtaGta11N.40.004255
ORF1ab/nsp3707I707IatAatT11P.10.000016
ORF1ab/nsp3707I707MatAatG11P.10.000016
ORF1ab/nsp3707I707delATA---11P.1.10.000318