CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 705 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3705L705LL1523LsynctActT84501210.01431954832-4834

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3705L705LctActT1218450All0.000023
ORF1ab/nsp3705L705LctActT1613B.1.617.20.000004
ORF1ab/nsp3705L705LctActT2540AY.40.000003
ORF1ab/nsp3705L705LctActT8363B.1.20.00007
ORF1ab/nsp3705L705LctActT5202AY.440.00003
ORF1ab/nsp3705L705LctActT3154AY.430.000013
ORF1ab/nsp3705L705LctActT7880AY.140.006865
ORF1ab/nsp3705L705LctActT276B.10.000018
ORF1ab/nsp3705L705LctActT262C.370.000232
ORF1ab/nsp3705L705LctActT151B.1.3510.00003
ORF1ab/nsp3705L705LctActT339AY.30.00003
ORF1ab/nsp3705L705LctActT115AY.470.000031
ORF1ab/nsp3705L705LctActT111AY.230.00007
ORF1ab/nsp3705L705LctActT110AY.360.000148
ORF1ab/nsp3705L705LctActT25AY.330.000134
ORF1ab/nsp3705L705LctActT24AY.860.00166
ORF1ab/nsp3705L705LctActT44N.30.023256
ORF1ab/nsp3705L705LctActT23AY.46.60.000144
ORF1ab/nsp3705L705LctActT11B.1.1490.003425
ORF1ab/nsp3705L705LctActT11B.1.3750.00082
ORF1ab/nsp3705L705LctActT11P.1.70.000319