CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 678 & Codon = aTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3678T678IT1496InonsynaCaaTa187561875614751-4753

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3678T678IaCaaTa1875618756All0.003587
ORF1ab/nsp3678T678IaCaaTa1196911969AY.230.834833
ORF1ab/nsp3678T678IaCaaTa23922392AY.23.10.998331
ORF1ab/nsp3678T678IaCaaTa14821482B.1.1.70.001327
ORF1ab/nsp3678T678IaCaaTa395395AY.40.000615
ORF1ab/nsp3678T678IaCaaTa220220AY.430.000975
ORF1ab/nsp3678T678IaCaaTa169169B.1.617.20.000636
ORF1ab/nsp3678T678IaCaaTa168168AY.440.001023
ORF1ab/nsp3678T678IaCaaTa154154AY.50.00318
ORF1ab/nsp3678T678IaCaaTa8787B.1.1600.002713
ORF1ab/nsp3678T678IaCaaTa8686B.1.4290.002023
ORF1ab/nsp3678T678IaCaaTa8484AY.30.000835
ORF1ab/nsp3678T678IaCaaTa8282B.1.5260.001927
ORF1ab/nsp3678T678IaCaaTa8181AY.1030.000503
ORF1ab/nsp3678T678IaCaaTa8181AY.250.000487
ORF1ab/nsp3678T678IaCaaTa7575B.1.20.00066
ORF1ab/nsp3678T678IaCaaTa6666AY.390.001631
ORF1ab/nsp3678T678IaCaaTa5858B.1.1770.000764
ORF1ab/nsp3678T678IaCaaTa5858B.1.2360.119097
ORF1ab/nsp3678T678IaCaaTa4949B.1.160.70.101871
ORF1ab/nsp3678T678IaCaaTa4141B.10.000376
ORF1ab/nsp3678T678IaCaaTa3333B.1.10.000599
ORF1ab/nsp3678T678IaCaaTa3333P.10.00052
ORF1ab/nsp3678T678IaCaaTa3131B.1.1180.208054
ORF1ab/nsp3678T678IaCaaTa2929AY.290.000457
ORF1ab/nsp3678T678IaCaaTa2929AY.46.20.018424
ORF1ab/nsp3678T678IaCaaTa2626AY.240.011207
ORF1ab/nsp3678T678IaCaaTa2424B.1.177.820.011456
ORF1ab/nsp3678T678IaCaaTa2424B.1.177.860.004403
ORF1ab/nsp3678T678IaCaaTa2121AY.870.017485
ORF1ab/nsp3678T678IaCaaTa2020AY.1020.00053
ORF1ab/nsp3678T678IaCaaTa1919AY.200.000738
ORF1ab/nsp3678T678IaCaaTa1919AY.470.000591
ORF1ab/nsp3678T678IaCaaTa1919B.1.1.2140.001054
ORF1ab/nsp3678T678IaCaaTa1818AY.1200.000669
ORF1ab/nsp3678T678IaCaaTa1818AY.330.001202
ORF1ab/nsp3678T678IaCaaTa1818B.1.3510.000535
ORF1ab/nsp3678T678IaCaaTa1717AY.350.003962
ORF1ab/nsp3678T678IaCaaTa1414AY.46.50.002778
ORF1ab/nsp3678T678IaCaaTa1414B.1.177.320.018893
ORF1ab/nsp3678T678IaCaaTa1313AY.980.001027
ORF1ab/nsp3678T678IaCaaTa1212P.20.00224
ORF1ab/nsp3678T678IaCaaTa1111AY.420.000443
ORF1ab/nsp3678T678IaCaaTa1111AY.570.007218
ORF1ab/nsp3678T678IaCaaTa1111B.1.1.2700.113402
ORF1ab/nsp3678T678IaCaaTa1010AY.116.10.003114
ORF1ab/nsp3678T678IaCaaTa1010AY.460.001041
ORF1ab/nsp3678T678IaCaaTa99AY.1170.000761
ORF1ab/nsp3678T678IaCaaTa99AY.1190.000318
ORF1ab/nsp3678T678IaCaaTa99AY.750.000504
ORF1ab/nsp3678T678IaCaaTa99B.1.1.5190.000357
ORF1ab/nsp3678T678IaCaaTa99R.10.00081
ORF1ab/nsp3678T678IaCaaTa88B.1.1.1750.615385
ORF1ab/nsp3678T678IaCaaTa88B.1.1.390.004077
ORF1ab/nsp3678T678IaCaaTa88B.1.177.210.000612
ORF1ab/nsp3678T678IaCaaTa88B.1.5960.000697
ORF1ab/nsp3678T678IaCaaTa88Q.10.001011
ORF1ab/nsp3678T678IaCaaTa88Q.80.001319
ORF1ab/nsp3678T678IaCaaTa77B.1.4270.000353
ORF1ab/nsp3678T678IaCaaTa66AY.60.000247
ORF1ab/nsp3678T678IaCaaTa66B.1.1.2220.001224
ORF1ab/nsp3678T678IaCaaTa66B.1.1.2840.000644
ORF1ab/nsp3678T678IaCaaTa66B.1.1.3680.018519
ORF1ab/nsp3678T678IaCaaTa66B.1.2580.000399
ORF1ab/nsp3678T678IaCaaTa66B.1.6180.024194
ORF1ab/nsp3678T678IaCaaTa55AY.260.000142
ORF1ab/nsp3678T678IaCaaTa55AY.4.20.000108
ORF1ab/nsp3678T678IaCaaTa55AY.75.10.000902
ORF1ab/nsp3678T678IaCaaTa55AY.790.006053
ORF1ab/nsp3678T678IaCaaTa55AY.850.002136
ORF1ab/nsp3678T678IaCaaTa55B.1.1.4340.001743
ORF1ab/nsp3678T678IaCaaTa55B.1.177.750.005203
ORF1ab/nsp3678T678IaCaaTa55B.1.3490.003574
ORF1ab/nsp3678T678IaCaaTa55B.1.36.10.005701
ORF1ab/nsp3678T678IaCaaTa55B.1.438.10.000536
ORF1ab/nsp3678T678IaCaaTa55B.1.5990.018248
ORF1ab/nsp3678T678IaCaaTa44A.2.50.001996
ORF1ab/nsp3678T678IaCaaTa44AY.1000.000184
ORF1ab/nsp3678T678IaCaaTa44AY.1100.000451
ORF1ab/nsp3678T678IaCaaTa44AY.16.10.00188
ORF1ab/nsp3678T678IaCaaTa44AY.340.000388
ORF1ab/nsp3678T678IaCaaTa44AY.360.000593
ORF1ab/nsp3678T678IaCaaTa44AY.410.001176
ORF1ab/nsp3678T678IaCaaTa44AY.450.000487
ORF1ab/nsp3678T678IaCaaTa44AY.46.40.000658
ORF1ab/nsp3678T678IaCaaTa44AY.640.002381
ORF1ab/nsp3678T678IaCaaTa44AY.830.006897
ORF1ab/nsp3678T678IaCaaTa44AY.9.10.000335
ORF1ab/nsp3678T678IaCaaTa44B.1.177.450.001525
ORF1ab/nsp3678T678IaCaaTa44B.1.177.620.004768
ORF1ab/nsp3678T678IaCaaTa44B.1.214.20.002398
ORF1ab/nsp3678T678IaCaaTa44B.1.2340.000528
ORF1ab/nsp3678T678IaCaaTa44B.1.2430.000278
ORF1ab/nsp3678T678IaCaaTa44B.1.3690.001141
ORF1ab/nsp3678T678IaCaaTa44B.1.5610.001588
ORF1ab/nsp3678T678IaCaaTa44B.1.6370.000292
ORF1ab/nsp3678T678IaCaaTa44C.370.000464
ORF1ab/nsp3678T678IaCaaTa44P.1.140.000191
ORF1ab/nsp3678T678IaCaaTa33AY.1180.000188
ORF1ab/nsp3678T678IaCaaTa33AY.540.000286
ORF1ab/nsp3678T678IaCaaTa33AY.90.000203
ORF1ab/nsp3678T678IaCaaTa33AY.98.10.000145
ORF1ab/nsp3678T678IaCaaTa33B.1.1.3480.002389
ORF1ab/nsp3678T678IaCaaTa33B.1.1580.071429
ORF1ab/nsp3678T678IaCaaTa33B.1.360.000438
ORF1ab/nsp3678T678IaCaaTa33B.1.36.180.001261
ORF1ab/nsp3678T678IaCaaTa33B.1.6200.002838
ORF1ab/nsp3678T678IaCaaTa33P.1.150.000697
ORF1ab/nsp3678T678IaCaaTa22AD.20.000438
ORF1ab/nsp3678T678IaCaaTa22AY.1070.000932
ORF1ab/nsp3678T678IaCaaTa22AY.1160.000574
ORF1ab/nsp3678T678IaCaaTa22AY.1210.000271
ORF1ab/nsp3678T678IaCaaTa22AY.140.000176
ORF1ab/nsp3678T678IaCaaTa22AY.170.016393
ORF1ab/nsp3678T678IaCaaTa22AY.270.000129
ORF1ab/nsp3678T678IaCaaTa22AY.610.00021
ORF1ab/nsp3678T678IaCaaTa22AY.680.000547
ORF1ab/nsp3678T678IaCaaTa22AY.7.20.001119
ORF1ab/nsp3678T678IaCaaTa22AY.880.001768
ORF1ab/nsp3678T678IaCaaTa22AY.9.20.000073
ORF1ab/nsp3678T678IaCaaTa22AY.920.000575
ORF1ab/nsp3678T678IaCaaTa22AY.99.20.000184
ORF1ab/nsp3678T678IaCaaTa22AZ.10.001735
ORF1ab/nsp3678T678IaCaaTa22B.1.1.1760.000879
ORF1ab/nsp3678T678IaCaaTa22B.1.1.3060.000877
ORF1ab/nsp3678T678IaCaaTa22B.1.1.3110.000716
ORF1ab/nsp3678T678IaCaaTa22B.1.1.3120.003824
ORF1ab/nsp3678T678IaCaaTa22B.1.1.480.005747
ORF1ab/nsp3678T678IaCaaTa22B.1.1570.00597
ORF1ab/nsp3678T678IaCaaTa22B.1.177.170.001642
ORF1ab/nsp3678T678IaCaaTa22B.1.177.810.000379
ORF1ab/nsp3678T678IaCaaTa22B.1.258.170.000208
ORF1ab/nsp3678T678IaCaaTa22B.1.36.80.002
ORF1ab/nsp3678T678IaCaaTa22B.1.466.20.000782
ORF1ab/nsp3678T678IaCaaTa22B.1.564.10.003155
ORF1ab/nsp3678T678IaCaaTa22B.1.5880.00182
ORF1ab/nsp3678T678IaCaaTa22B.1.619.10.001283
ORF1ab/nsp3678T678IaCaaTa22B.6.60.001778
ORF1ab/nsp3678T678IaCaaTa22P.1.120.000968
ORF1ab/nsp3678T678IaCaaTa22Q.20.001227
ORF1ab/nsp3678T678IaCaaTa11A0.000387
ORF1ab/nsp3678T678IaCaaTa11AY.10.000396
ORF1ab/nsp3678T678IaCaaTa11AY.100.00053
ORF1ab/nsp3678T678IaCaaTa11AY.1010.00049
ORF1ab/nsp3678T678IaCaaTa11AY.1080.001103
ORF1ab/nsp3678T678IaCaaTa11AY.1130.000142
ORF1ab/nsp3678T678IaCaaTa11AY.120.10.000321
ORF1ab/nsp3678T678IaCaaTa11AY.160.00038
ORF1ab/nsp3678T678IaCaaTa11AY.3.10.000085
ORF1ab/nsp3678T678IaCaaTa11AY.300.000396
ORF1ab/nsp3678T678IaCaaTa11AY.39.10.00004
ORF1ab/nsp3678T678IaCaaTa11AY.4.50.000107
ORF1ab/nsp3678T678IaCaaTa11AY.46.10.001027
ORF1ab/nsp3678T678IaCaaTa11AY.480.000465
ORF1ab/nsp3678T678IaCaaTa11AY.5.30.000337
ORF1ab/nsp3678T678IaCaaTa11AY.5.40.000277
ORF1ab/nsp3678T678IaCaaTa11AY.500.000799
ORF1ab/nsp3678T678IaCaaTa11AY.620.000436
ORF1ab/nsp3678T678IaCaaTa11AY.650.000533
ORF1ab/nsp3678T678IaCaaTa11AY.70.000196
ORF1ab/nsp3678T678IaCaaTa11AY.700.000209
ORF1ab/nsp3678T678IaCaaTa11AY.740.000116
ORF1ab/nsp3678T678IaCaaTa11AY.770.001127
ORF1ab/nsp3678T678IaCaaTa11AY.80.000606
ORF1ab/nsp3678T678IaCaaTa11AY.840.000437
ORF1ab/nsp3678T678IaCaaTa11AY.860.00083
ORF1ab/nsp3678T678IaCaaTa11AY.930.000273
ORF1ab/nsp3678T678IaCaaTa11AY.960.002075
ORF1ab/nsp3678T678IaCaaTa11B0.000128
ORF1ab/nsp3678T678IaCaaTa11B.1.1.1170.009709
ORF1ab/nsp3678T678IaCaaTa11B.1.1.1410.002012
ORF1ab/nsp3678T678IaCaaTa11B.1.1.1930.111111
ORF1ab/nsp3678T678IaCaaTa11B.1.1.2200.001859
ORF1ab/nsp3678T678IaCaaTa11B.1.1.2310.003096
ORF1ab/nsp3678T678IaCaaTa11B.1.1.2370.005405
ORF1ab/nsp3678T678IaCaaTa11B.1.1.250.000569
ORF1ab/nsp3678T678IaCaaTa11B.1.1.3170.000412
ORF1ab/nsp3678T678IaCaaTa11B.1.1.3180.000302
ORF1ab/nsp3678T678IaCaaTa11B.1.1.330.000421
ORF1ab/nsp3678T678IaCaaTa11B.1.1.370.000193
ORF1ab/nsp3678T678IaCaaTa11B.1.1.4190.007407
ORF1ab/nsp3678T678IaCaaTa11B.1.1.4370.010417
ORF1ab/nsp3678T678IaCaaTa11B.1.1100.004525
ORF1ab/nsp3678T678IaCaaTa11B.1.1280.000635
ORF1ab/nsp3678T678IaCaaTa11B.1.160.140.002119
ORF1ab/nsp3678T678IaCaaTa11B.1.177.310.011494
ORF1ab/nsp3678T678IaCaaTa11B.1.177.410.0025
ORF1ab/nsp3678T678IaCaaTa11B.1.177.430.001477
ORF1ab/nsp3678T678IaCaaTa11B.1.177.440.000519
ORF1ab/nsp3678T678IaCaaTa11B.1.177.470.012987
ORF1ab/nsp3678T678IaCaaTa11B.1.177.530.002392
ORF1ab/nsp3678T678IaCaaTa11B.1.177.540.000606
ORF1ab/nsp3678T678IaCaaTa11B.1.177.600.000218
ORF1ab/nsp3678T678IaCaaTa11B.1.177.720.00339
ORF1ab/nsp3678T678IaCaaTa11B.1.2210.000071
ORF1ab/nsp3678T678IaCaaTa11B.1.2740.011905
ORF1ab/nsp3678T678IaCaaTa11B.1.36.360.000602
ORF1ab/nsp3678T678IaCaaTa11B.1.3670.000792
ORF1ab/nsp3678T678IaCaaTa11B.1.3960.000706
ORF1ab/nsp3678T678IaCaaTa11B.1.4000.000429
ORF1ab/nsp3678T678IaCaaTa11B.1.4520.013699
ORF1ab/nsp3678T678IaCaaTa11B.1.466.10.007194
ORF1ab/nsp3678T678IaCaaTa11B.1.4700.001404
ORF1ab/nsp3678T678IaCaaTa11B.1.4800.002488
ORF1ab/nsp3678T678IaCaaTa11B.1.4990.00105
ORF1ab/nsp3678T678IaCaaTa11B.1.5090.000866
ORF1ab/nsp3678T678IaCaaTa11B.1.5250.000113
ORF1ab/nsp3678T678IaCaaTa11B.1.5300.007143
ORF1ab/nsp3678T678IaCaaTa11B.1.5770.000687
ORF1ab/nsp3678T678IaCaaTa11B.1.5900.004545
ORF1ab/nsp3678T678IaCaaTa11B.1.5950.000261
ORF1ab/nsp3678T678IaCaaTa11B.1.6050.005952
ORF1ab/nsp3678T678IaCaaTa11B.1.6190.000871
ORF1ab/nsp3678T678IaCaaTa11B.1.6210.000089
ORF1ab/nsp3678T678IaCaaTa11B.1.621.10.000506
ORF1ab/nsp3678T678IaCaaTa11B.350.007812
ORF1ab/nsp3678T678IaCaaTa11B.400.000364
ORF1ab/nsp3678T678IaCaaTa11D.20.000075
ORF1ab/nsp3678T678IaCaaTa11P.1.170.000162
ORF1ab/nsp3678T678IaCaaTa11P.1.20.001156
ORF1ab/nsp3678T678IaCaaTa11P.1.70.000319
ORF1ab/nsp3678T678IaCaaTa11Q.30.000145