CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 67

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp367P67LP885LnonsyncCacTa312631180.9974412918-2920
ORF1ab/nsp367P67LP885LnonsyncCAcTG312650.001599492918-2920
ORF1ab/nsp367P67LP885LnonsynCCATTG312620.0006397952918-2920
ORF1ab/nsp367P67LP885LnonsyncCAcTT312610.0003198982918-2920
ORF1ab/nsp367P67SP885SnonsynCcaTca119711960.9991652918-2920
ORF1ab/nsp367P67SP885SnonsynCCAAGT119710.0008354222918-2920
ORF1ab/nsp367P67PP885PsynccAccG6885100.7412792918-2920
ORF1ab/nsp367P67PP885PsynccAccT6881410.2049422918-2920
ORF1ab/nsp367P67PP885PsynccAccC688370.05377912918-2920
ORF1ab/nsp367P67TP885TnonsynCcaAca72710.9861112918-2920
ORF1ab/nsp367P67TP885TnonsynCcAAcT7210.01388892918-2920
ORF1ab/nsp367P67delP885deldelCCA---454512918-2920
ORF1ab/nsp367P67RP885RnonsynCCaAGa2360.260872918-2920
ORF1ab/nsp367P67RP885RnonsyncCacGa2360.260872918-2920
ORF1ab/nsp367P67RP885RnonsyncCAcGT2360.260872918-2920
ORF1ab/nsp367P67RP885RnonsyncCAcGG2330.1304352918-2920
ORF1ab/nsp367P67RP885RnonsynCCAAGG2320.08695652918-2920
ORF1ab/nsp367P67QP885QnonsyncCacAa22130.5909092918-2920
ORF1ab/nsp367P67QP885QnonsyncCAcAG2290.4090912918-2920
ORF1ab/nsp367P67AP885AnonsynCcaGca13120.9230772918-2920
ORF1ab/nsp367P67AP885AnonsynCcAGcG1310.07692312918-2920
ORF1ab/nsp367P67MP885MnonsynCCAATG6612918-2920
ORF1ab/nsp367P67del1P885del1delCca-ca630.52918-2920
ORF1ab/nsp367P67del1P885del1delCCA-NN620.3333332918-2920
ORF1ab/nsp367P67del1P885del1delccAcc-610.1666672918-2920
ORF1ab/nsp367P67YP885YnonsynCCATAC4412918-2920
ORF1ab/nsp367P67IP885InonsynCCAATC420.52918-2920
ORF1ab/nsp367P67IP885InonsynCCaATa420.52918-2920
ORF1ab/nsp367P67NP885NnonsynCCAAAC2212918-2920
ORF1ab/nsp367P67FP885FnonsynCCATTC2212918-2920
ORF1ab/nsp367P67XP885XnonsynCCATAG2212918-2920
ORF1ab/nsp367P67KP885KnonsynCCAAAG2212918-2920
ORF1ab/nsp367P67VP885VnonsynCCaGTa210.52918-2920
ORF1ab/nsp367P67VP885VnonsynCCAGTC210.52918-2920
ORF1ab/nsp367P67del2P885del2delcCAc--1112918-2920

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp367P67LcCacTa31183126All0.000596
ORF1ab/nsp367P67LcCAcTG53126All0.000001
ORF1ab/nsp367P67LCCATTG23126All0
ORF1ab/nsp367P67LcCAcTT13126All0
ORF1ab/nsp367P67SCcaTca11961197All0.000229
ORF1ab/nsp367P67SCCAAGT11197All0
ORF1ab/nsp367P67LcCacTa934934AY.600.876173
ORF1ab/nsp367P67PccAccG510688All0.000098
ORF1ab/nsp367P67PccAccT141688All0.000027
ORF1ab/nsp367P67PccAccC37688All0.000007
ORF1ab/nsp367P67SCcaTca499499AY.40.000777
ORF1ab/nsp367P67LcCacTa480480B.1.1.70.00043
ORF1ab/nsp367P67PccAccG401471B.1.1.70.000359
ORF1ab/nsp367P67PccAccT66471B.1.1.70.000059
ORF1ab/nsp367P67PccAccC4471B.1.1.70.000004
ORF1ab/nsp367P67LcCacTa294294AY.50.006071
ORF1ab/nsp367P67LcCacTa178178B.1.2701
ORF1ab/nsp367P67SCcaTca168168B.1.1.70.00015
ORF1ab/nsp367P67LcCacTa139139B.1.20.001224
ORF1ab/nsp367P67LcCacTa117117B.1.617.20.000441
ORF1ab/nsp367P67LcCacTa102102AY.40.000159
ORF1ab/nsp367P67LcCacTa7777AY.250.000463
ORF1ab/nsp367P67TCcaAca7172All0.000014
ORF1ab/nsp367P67TCcAAcT172All0
ORF1ab/nsp367P67LcCacTa7172AY.430.000315
ORF1ab/nsp367P67LcCAcTG172AY.430.000004
ORF1ab/nsp367P67SCcaTca5959AY.430.000261
ORF1ab/nsp367P67PccAccT4446B.1.2580.002928
ORF1ab/nsp367P67PccAccG246B.1.2580.000133
ORF1ab/nsp367P67delCCA---4545All0.000009
ORF1ab/nsp367P67SCcaTca4343B.1.20.000379
ORF1ab/nsp367P67LcCacTa3636B.10.00033
ORF1ab/nsp367P67LcCacTa3434AY.470.001058
ORF1ab/nsp367P67SCcaTca3333AY.1030.000205
ORF1ab/nsp367P67PccAccG2729B.1.617.20.000102
ORF1ab/nsp367P67PccAccC229B.1.617.20.000008
ORF1ab/nsp367P67LcCacTa2828B.1.1770.000369
ORF1ab/nsp367P67LcCacTa2626AY.1030.000161
ORF1ab/nsp367P67SCcaTca2525AY.4.20.000542
ORF1ab/nsp367P67SCcaTca2525B.1.617.20.000094
ORF1ab/nsp367P67SCcaTca2424B.1.10.000435
ORF1ab/nsp367P67RcCacGa623All0.000001
ORF1ab/nsp367P67RcCAcGT623All0.000001
ORF1ab/nsp367P67RCCaAGa623All0.000001
ORF1ab/nsp367P67RcCAcGG323All0.000001
ORF1ab/nsp367P67RCCAAGG223All0
ORF1ab/nsp367P67QcCacAa1322All0.000002
ORF1ab/nsp367P67QcCAcAG922All0.000002
ORF1ab/nsp367P67LcCacTa2222AY.440.000134
ORF1ab/nsp367P67LcCacTa2122B.1.10.000381
ORF1ab/nsp367P67LcCAcTG122B.1.10.000018
ORF1ab/nsp367P67LcCacTa2121P.10.000331
ORF1ab/nsp367P67PccAccG1720AY.440.000103
ORF1ab/nsp367P67PccAccC220AY.440.000012
ORF1ab/nsp367P67PccAccT120AY.440.000006
ORF1ab/nsp367P67LcCacTa2020B.1.4290.000471
ORF1ab/nsp367P67SCcaTca1919AY.250.000114
ORF1ab/nsp367P67PccAccG1319AY.250.000078
ORF1ab/nsp367P67PccAccC619AY.250.000036
ORF1ab/nsp367P67TCcaAca1919AY.60.000781
ORF1ab/nsp367P67LcCacTa1818AY.30.000179
ORF1ab/nsp367P67LcCacTa1818AY.4.20.00039
ORF1ab/nsp367P67LcCacTa1818B.1.2390.021978
ORF1ab/nsp367P67LcCacTa1818Q.20.011043
ORF1ab/nsp367P67LcCacTa1717AY.9.10.001423
ORF1ab/nsp367P67LcCacTa1616AY.290.000252
ORF1ab/nsp367P67PccAccG715AY.40.000011
ORF1ab/nsp367P67PccAccC615AY.40.000009
ORF1ab/nsp367P67PccAccT215AY.40.000003
ORF1ab/nsp367P67SCcaTca1515AY.520.012215
ORF1ab/nsp367P67SCcaTca1515B.10.000137
ORF1ab/nsp367P67LcCacTa1515B.1.5260.000353
ORF1ab/nsp367P67LcCacTa1414AY.230.000976
ORF1ab/nsp367P67ACcaGca1213All0.000002
ORF1ab/nsp367P67ACcAGcG113All0
ORF1ab/nsp367P67SCcaTca1313AY.30.000129
ORF1ab/nsp367P67TCcaAca1313AY.3.10.001108
ORF1ab/nsp367P67TCcaAca1313AY.40.00002
ORF1ab/nsp367P67SCcaTca1313B.1.1770.000171
ORF1ab/nsp367P67SCcaTca1212AY.46.40.001974
ORF1ab/nsp367P67delCCA---1212B.1.1.70.000011
ORF1ab/nsp367P67LcCacTa1111AY.1200.000409
ORF1ab/nsp367P67SCcaTca1111AY.50.000227
ORF1ab/nsp367P67ACcaGca1111AY.98.10.000533
ORF1ab/nsp367P67SCcaTca1111P.10.000173
ORF1ab/nsp367P67SCcaTca1010AY.1020.000265
ORF1ab/nsp367P67LcCacTa1010B.1.1.500.006789
ORF1ab/nsp367P67PccAccT910B.1.20.000079
ORF1ab/nsp367P67PccAccC110B.1.20.000009
ORF1ab/nsp367P67LcCacTa1010B.1.2210.00071
ORF1ab/nsp367P67SCcaTca99AE.80.004401
ORF1ab/nsp367P67PccAccC89AY.1030.00005
ORF1ab/nsp367P67PccAccG19AY.1030.000006
ORF1ab/nsp367P67LcCacTa99AY.260.000255
ORF1ab/nsp367P67SCcaTca99AY.350.002097
ORF1ab/nsp367P67LcCacTa99B.1.1.390.004587
ORF1ab/nsp367P67LcCacTa99B.1.2580.000599
ORF1ab/nsp367P67LcCacTa88AY.940.003541
ORF1ab/nsp367P67LcCacTa88Q.40.003638
ORF1ab/nsp367P67SCcaTca77AY.360.001037
ORF1ab/nsp367P67LcCacTa77AY.420.000282
ORF1ab/nsp367P67RcCAcGT47AY.850.001709
ORF1ab/nsp367P67RcCAcGG17AY.850.000427
ORF1ab/nsp367P67RCCaAGa17AY.850.000427
ORF1ab/nsp367P67RcCacGa17AY.850.000427
ORF1ab/nsp367P67SCcaTca77B.1.1.2860.02029
ORF1ab/nsp367P67LcCacTa77B.1.177.820.003341
ORF1ab/nsp367P67LcCacTa77B.1.36.270.005344
ORF1ab/nsp367P67SCcaTca77B.1.4270.000353
ORF1ab/nsp367P67LcCacTa77P.1.140.000335
ORF1ab/nsp367P67MCCAATG66All0.000001
ORF1ab/nsp367P67del1Cca-ca36All0.000001
ORF1ab/nsp367P67del1CCA-NN26All0
ORF1ab/nsp367P67del1ccAcc-16All0
ORF1ab/nsp367P67LcCacTa66AY.1020.000159
ORF1ab/nsp367P67LcCacTa66AY.1190.000212
ORF1ab/nsp367P67LcCacTa66AY.140.000528
ORF1ab/nsp367P67SCcaTca66AY.4.30.005051
ORF1ab/nsp367P67SCcaTca66AY.420.000241
ORF1ab/nsp367P67LcCacTa66AY.740.000694
ORF1ab/nsp367P67PccAccT66B.1.1.390.003058
ORF1ab/nsp367P67LcCacTa66B.1.160.290.025316
ORF1ab/nsp367P67LcCacTa66B.1.177.600.001311
ORF1ab/nsp367P67LcCacTa66B.1.5960.000523
ORF1ab/nsp367P67LcCacTa55AY.390.000124
ORF1ab/nsp367P67LcCacTa35AY.39.10.000119
ORF1ab/nsp367P67LcCAcTG25AY.39.10.000079
ORF1ab/nsp367P67LcCacTa55AY.4.50.000537
ORF1ab/nsp367P67PccAccC55AY.9.20.000184
ORF1ab/nsp367P67PccAccG35B.10.000027
ORF1ab/nsp367P67PccAccT25B.10.000018
ORF1ab/nsp367P67LcCacTa55B.1.1.2770.003794
ORF1ab/nsp367P67TCcaAca55B.1.1.70.000004
ORF1ab/nsp367P67SCcaTca55B.1.4290.000118
ORF1ab/nsp367P67SCcaTca55B.1.438.10.000536
ORF1ab/nsp367P67YCCATAC440.222222
ORF1ab/nsp367P67YCCATAC44All0.000001
ORF1ab/nsp367P67ICCAATC24All0
ORF1ab/nsp367P67ICCaATa24All0
ORF1ab/nsp367P67LcCacTa44AY.1110.000733
ORF1ab/nsp367P67SCcaTca44AY.1200.000149
ORF1ab/nsp367P67LcCacTa44AY.16.10.00188
ORF1ab/nsp367P67PccAccT44AY.200.000155
ORF1ab/nsp367P67LcCacTa44AY.29.10.000882
ORF1ab/nsp367P67LcCacTa44AY.340.000388
ORF1ab/nsp367P67RcCacGa14AY.39.10.00004
ORF1ab/nsp367P67RCCAAGG14AY.39.10.00004
ORF1ab/nsp367P67RcCAcGG14AY.39.10.00004
ORF1ab/nsp367P67RCCaAGa14AY.39.10.00004
ORF1ab/nsp367P67SCcaTca44AY.440.000024
ORF1ab/nsp367P67SCcaTca44AY.9.20.000147
ORF1ab/nsp367P67LcCacTa44AY.99.10.006211
ORF1ab/nsp367P67LcCacTa44AY.99.20.000369
ORF1ab/nsp367P67RCCAAGG14B.1.10.000018
ORF1ab/nsp367P67RcCAcGG14B.1.10.000018
ORF1ab/nsp367P67RCCaAGa14B.1.10.000018
ORF1ab/nsp367P67RcCacGa14B.1.10.000018
ORF1ab/nsp367P67LcCacTa44B.1.1.10.001307
ORF1ab/nsp367P67SCcaTca44B.1.1.370.000771
ORF1ab/nsp367P67LcCacTa44B.1.1600.000125
ORF1ab/nsp367P67SCcaTca44B.1.2210.000284
ORF1ab/nsp367P67LcCacTa44B.1.3510.000119
ORF1ab/nsp367P67LcCacTa44B.1.360.000584
ORF1ab/nsp367P67LcCacTa44B.1.4970.001259
ORF1ab/nsp367P67SCcaTca44B.1.6280.001409
ORF1ab/nsp367P67LcCacTa44B.1.6370.000292
ORF1ab/nsp367P67PccAccG24P.10.000032
ORF1ab/nsp367P67PccAccT24P.10.000032
ORF1ab/nsp367P67SCcaTca44P.1.150.000929
ORF1ab/nsp367P67SCcaTca33AY.1000.000138
ORF1ab/nsp367P67TCcaAca33AY.1030.000019
ORF1ab/nsp367P67LcCacTa33AY.1130.000427
ORF1ab/nsp367P67PccAccG33AY.1170.000254
ORF1ab/nsp367P67SCcaTca33AY.1190.000106
ORF1ab/nsp367P67SCcaTca33AY.1210.000406
ORF1ab/nsp367P67TCcaAca33AY.250.000018
ORF1ab/nsp367P67SCcaTca33AY.290.000047
ORF1ab/nsp367P67TCcaAca33AY.30.00003
ORF1ab/nsp367P67LcCacTa33AY.330.0002
ORF1ab/nsp367P67PccAccG33AY.390.000074
ORF1ab/nsp367P67delCCA---33AY.430.000013
ORF1ab/nsp367P67LcCacTa33AY.460.000312
ORF1ab/nsp367P67SCcaTca23AY.470.000062
ORF1ab/nsp367P67RcCAcGT13AY.470.000031
ORF1ab/nsp367P67RcCacGa13AY.470.000031
ORF1ab/nsp367P67SCCAAGT13AY.470.000031
ORF1ab/nsp367P67RCCaAGa13AY.470.000031
ORF1ab/nsp367P67LcCacTa33AY.480.001395
ORF1ab/nsp367P67LcCacTa33AY.650.001599
ORF1ab/nsp367P67LcCacTa23AY.670.000929
ORF1ab/nsp367P67LcCAcTG13AY.670.000464
ORF1ab/nsp367P67LcCacTa23AY.850.000854
ORF1ab/nsp367P67LcCAcTT13AY.850.000427
ORF1ab/nsp367P67delCCA---33B.1.1.330.001263
ORF1ab/nsp367P67LcCacTa33B.1.1.370.000579
ORF1ab/nsp367P67PccAccG33B.1.1790.011278
ORF1ab/nsp367P67LcCacTa33B.1.2400.000647
ORF1ab/nsp367P67SCcaTca33B.1.2430.000209
ORF1ab/nsp367P67PccAccG33B.1.3510.000089
ORF1ab/nsp367P67SCcaTca33B.1.5510.003871
ORF1ab/nsp367P67SCcaTca33D.20.000225
ORF1ab/nsp367P67QcCacAa33K.30.018519
ORF1ab/nsp367P67LcCacTa33P.20.00056
ORF1ab/nsp367P67LcCacTa33Q.50.050847
ORF1ab/nsp367P67SCcaTca33R.10.00027
ORF1ab/nsp367P67ICCAATC220.111111
ORF1ab/nsp367P67KCCAAAG220.111111
ORF1ab/nsp367P67NCCAAAC220.111111
ORF1ab/nsp367P67MCCAATG220.111111
ORF1ab/nsp367P67XCCATAG220.111111
ORF1ab/nsp367P67FCCATTC220.111111
ORF1ab/nsp367P67LCCATTG220.111111
ORF1ab/nsp367P67delCCA---220.111111
ORF1ab/nsp367P67RcCacGa120.055556
ORF1ab/nsp367P67RCCaAGa120.055556
ORF1ab/nsp367P67SCcaTca22A.270.003311
ORF1ab/nsp367P67FCCATTC22All0
ORF1ab/nsp367P67XCCATAG22All0
ORF1ab/nsp367P67KCCAAAG22All0
ORF1ab/nsp367P67NCCAAAC22All0
ORF1ab/nsp367P67VCCaGTa12All0
ORF1ab/nsp367P67VCCAGTC12All0
ORF1ab/nsp367P67SCcaTca22AY.10.000791
ORF1ab/nsp367P67LcCacTa22AY.1000.000092
ORF1ab/nsp367P67LcCacTa22AY.1080.002205
ORF1ab/nsp367P67SCcaTca22AY.1140.000462
ORF1ab/nsp367P67SCcaTca22AY.1160.000574
ORF1ab/nsp367P67LcCacTa22AY.1170.000169
ORF1ab/nsp367P67PccAccG22AY.1180.000125
ORF1ab/nsp367P67RcCAcGT12AY.1190.000035
ORF1ab/nsp367P67RcCacGa12AY.1190.000035
ORF1ab/nsp367P67LcCacTa22AY.1210.000271
ORF1ab/nsp367P67LcCacTa22AY.130.000322
ORF1ab/nsp367P67LcCacTa22AY.210.003795
ORF1ab/nsp367P67PccAccG22AY.230.000139
ORF1ab/nsp367P67SCcaTca22AY.260.000057
ORF1ab/nsp367P67QcCAcAG22AY.30.00002
ORF1ab/nsp367P67LcCacTa22AY.380.000999
ORF1ab/nsp367P67PccAccG22AY.39.10.000079
ORF1ab/nsp367P67QcCacAa22AY.40.000003
ORF1ab/nsp367P67QcCAcAG22AY.430.000009
ORF1ab/nsp367P67TCcaAca22AY.440.000012
ORF1ab/nsp367P67SCcaTca22AY.450.000243
ORF1ab/nsp367P67SCcaTca22AY.46.60.000144
ORF1ab/nsp367P67LcCacTa22AY.46.60.000144
ORF1ab/nsp367P67SCcaTca22AY.540.000191
ORF1ab/nsp367P67LcCacTa22AY.590.001059
ORF1ab/nsp367P67LcCacTa22AY.610.00021
ORF1ab/nsp367P67LcCacTa22AY.640.00119
ORF1ab/nsp367P67LcCacTa22AY.7.20.001119
ORF1ab/nsp367P67LcCacTa22AY.750.000112
ORF1ab/nsp367P67LcCacTa22AY.75.10.000361
ORF1ab/nsp367P67LcCacTa22AY.80.001212
ORF1ab/nsp367P67LcCacTa22AY.870.001665
ORF1ab/nsp367P67LcCacTa22AY.9.20.000073
ORF1ab/nsp367P67LcCacTa22AY.980.000158
ORF1ab/nsp367P67LcCacTa22AY.98.10.000097
ORF1ab/nsp367P67delCCA---22B.10.000018
ORF1ab/nsp367P67QcCacAa12B.10.000009
ORF1ab/nsp367P67QcCAcAG12B.10.000009
ORF1ab/nsp367P67delCCA---22B.1.10.000036
ORF1ab/nsp367P67PccAccG12B.1.10.000018
ORF1ab/nsp367P67PccAccT12B.1.10.000018
ORF1ab/nsp367P67SCcaTca22B.1.1.1570.001826
ORF1ab/nsp367P67LcCacTa22B.1.1.2160.001781
ORF1ab/nsp367P67LcCacTa22B.1.1.2220.000408
ORF1ab/nsp367P67LcCacTa22B.1.1.2260.011628
ORF1ab/nsp367P67LcCacTa22B.1.1.2510.015873
ORF1ab/nsp367P67delCCA---22B.1.1.3480.001592
ORF1ab/nsp367P67LcCacTa22B.1.1.5190.000079
ORF1ab/nsp367P67SCcaTca22B.1.1600.000062
ORF1ab/nsp367P67LcCacTa22B.1.177.320.002699
ORF1ab/nsp367P67LcCacTa22B.1.177.350.001382
ORF1ab/nsp367P67SCcaTca22B.1.177.810.000379
ORF1ab/nsp367P67del1Cca-ca12B.1.20.000009
ORF1ab/nsp367P67del1ccAcc-12B.1.20.000009
ORF1ab/nsp367P67LcCacTa22B.1.2340.000264
ORF1ab/nsp367P67SCcaTca22B.1.2580.000133
ORF1ab/nsp367P67SCcaTca22B.1.36.310.003503
ORF1ab/nsp367P67LcCacTa22B.1.3620.003082
ORF1ab/nsp367P67LcCacTa22B.1.3910.002255
ORF1ab/nsp367P67LcCacTa22B.1.4270.000101
ORF1ab/nsp367P67LcCacTa22B.1.4740.003802
ORF1ab/nsp367P67LcCacTa22B.1.5380.016129
ORF1ab/nsp367P67SCcaTca22B.1.5950.000522
ORF1ab/nsp367P67PccAccG22B.1.5960.000174
ORF1ab/nsp367P67LcCacTa22B.1.6090.000959
ORF1ab/nsp367P67delCCA---22B.1.617.20.000008
ORF1ab/nsp367P67LcCacTa22B.1.6210.000177
ORF1ab/nsp367P67LcCacTa22B.400.000729
ORF1ab/nsp367P67SCcaTca22C.370.000232
ORF1ab/nsp367P67LcCacTa22N.60.014184
ORF1ab/nsp367P67delCCA---22N.60.014184
ORF1ab/nsp367P67delCCA---22P.10.000032
ORF1ab/nsp367P67SCcaTca22P.1.140.000096
ORF1ab/nsp367P67SCcaTca22P.1.170.000324
ORF1ab/nsp367P67SCcaTca22Q.70.002222
ORF1ab/nsp367P67LcCacTa22R.10.00018
ORF1ab/nsp367P67SCcaTca110.055556
ORF1ab/nsp367P67TCcaAca110.055556
ORF1ab/nsp367P67LcCacTa11A0.000387
ORF1ab/nsp367P67LcCacTa11A.2.50.000499
ORF1ab/nsp367P67LcCacTa11A.2.5.10.004808
ORF1ab/nsp367P67del2cCAc--11All0
ORF1ab/nsp367P67delCCA---11AY.1000.000046
ORF1ab/nsp367P67PccAccG11AY.1020.000027
ORF1ab/nsp367P67LcCacTa11AY.1100.000113
ORF1ab/nsp367P67TCcaAca11AY.1170.000085
ORF1ab/nsp367P67SCcaTca11AY.1170.000085
ORF1ab/nsp367P67SCcaTca11AY.1180.000063
ORF1ab/nsp367P67PccAccT11AY.1190.000035
ORF1ab/nsp367P67PccAccT11AY.130.000161
ORF1ab/nsp367P67QcCacAa11AY.130.000161
ORF1ab/nsp367P67SCcaTca11AY.160.00038
ORF1ab/nsp367P67PccAccC11AY.160.00038
ORF1ab/nsp367P67SCcaTca11AY.190.00114
ORF1ab/nsp367P67QcCAcAG11AY.250.000006
ORF1ab/nsp367P67ACcaGca11AY.260.000028
ORF1ab/nsp367P67QcCAcAG11AY.260.000028
ORF1ab/nsp367P67SCcaTca11AY.270.000065
ORF1ab/nsp367P67PccAccG11AY.3.10.000085
ORF1ab/nsp367P67LcCacTa11AY.300.000396
ORF1ab/nsp367P67SCcaTca11AY.320.000532
ORF1ab/nsp367P67SCcaTca11AY.330.000067
ORF1ab/nsp367P67SCcaTca11AY.340.000097
ORF1ab/nsp367P67PccAccG11AY.340.000097
ORF1ab/nsp367P67SCcaTca11AY.34.10.00051
ORF1ab/nsp367P67LcCacTa11AY.360.000148
ORF1ab/nsp367P67del1CCA-NN11AY.390.000025
ORF1ab/nsp367P67SCcaTca11AY.39.10.00004
ORF1ab/nsp367P67VCCaGTa11AY.39.10.00004
ORF1ab/nsp367P67MCCAATG11AY.39.10.00004
ORF1ab/nsp367P67ICCaATa11AY.39.10.00004
ORF1ab/nsp367P67PccAccG11AY.4.50.000107
ORF1ab/nsp367P67SCcaTca11AY.400.000964
ORF1ab/nsp367P67QcCacAa11AY.420.00004
ORF1ab/nsp367P67PccAccG11AY.430.000004
ORF1ab/nsp367P67delCCA---11AY.440.000006
ORF1ab/nsp367P67QcCAcAG11AY.460.000104
ORF1ab/nsp367P67LcCacTa11AY.520.000814
ORF1ab/nsp367P67SCcaTca11AY.530.000288
ORF1ab/nsp367P67LcCacTa11AY.540.000095
ORF1ab/nsp367P67LcCacTa11AY.550.000917
ORF1ab/nsp367P67SCcaTca11AY.570.000656
ORF1ab/nsp367P67LcCacTa11AY.60.000041
ORF1ab/nsp367P67del1CCA-NN11AY.610.000105
ORF1ab/nsp367P67VCCAGTC11AY.620.000436
ORF1ab/nsp367P67SCcaTca11AY.640.000595
ORF1ab/nsp367P67LcCacTa11AY.7.10.000113
ORF1ab/nsp367P67SCcaTca11AY.7.10.000113
ORF1ab/nsp367P67SCcaTca11AY.730.000665
ORF1ab/nsp367P67LcCacTa11AY.770.001127
ORF1ab/nsp367P67SCcaTca11AY.850.000427
ORF1ab/nsp367P67ACcAGcG11AY.850.000427
ORF1ab/nsp367P67TCcaAca11AY.850.000427
ORF1ab/nsp367P67LcCacTa11AY.880.000884
ORF1ab/nsp367P67PccAccG11AY.9.10.000084
ORF1ab/nsp367P67LcCacTa11AY.930.000273
ORF1ab/nsp367P67SCcaTca11AY.940.000443
ORF1ab/nsp367P67LcCacTa11AY.990.001049
ORF1ab/nsp367P67delCCA---11AY.990.001049
ORF1ab/nsp367P67SCcaTca11AY.99.20.000092
ORF1ab/nsp367P67PccAccG11AY.99.20.000092
ORF1ab/nsp367P67LcCacTa11AZ.20.000821
ORF1ab/nsp367P67delCCA---11AZ.20.000821
ORF1ab/nsp367P67QcCAcAG11B0.000128
ORF1ab/nsp367P67SCcaTca11B0.000128
ORF1ab/nsp367P67MCCAATG11B.10.000009
ORF1ab/nsp367P67MCCAATG11B.1.10.000018
ORF1ab/nsp367P67ICCaATa11B.1.10.000018
ORF1ab/nsp367P67LcCacTa11B.1.1.100.001115
ORF1ab/nsp367P67LcCacTa11B.1.1.1480.008772
ORF1ab/nsp367P67LcCacTa11B.1.1.1610.003534
ORF1ab/nsp367P67LcCacTa11B.1.1.1700.001247
ORF1ab/nsp367P67LcCacTa11B.1.1.1740.003378
ORF1ab/nsp367P67SCcaTca11B.1.1.2140.000055
ORF1ab/nsp367P67LcCacTa11B.1.1.2140.000055
ORF1ab/nsp367P67SCcaTca11B.1.1.2220.000204
ORF1ab/nsp367P67PccAccT11B.1.1.2320.001815
ORF1ab/nsp367P67LcCacTa11B.1.1.2440.015385
ORF1ab/nsp367P67SCcaTca11B.1.1.2970.002237
ORF1ab/nsp367P67SCcaTca11B.1.1.3020.002075
ORF1ab/nsp367P67LcCacTa11B.1.1.3060.000438
ORF1ab/nsp367P67SCcaTca11B.1.1.3060.000438
ORF1ab/nsp367P67LcCacTa11B.1.1.3070.002532
ORF1ab/nsp367P67SCcaTca11B.1.1.3110.000358
ORF1ab/nsp367P67LcCacTa11B.1.1.330.000421
ORF1ab/nsp367P67LcCacTa11B.1.1.3480.000796
ORF1ab/nsp367P67LcCacTa11B.1.1.3560.008547
ORF1ab/nsp367P67LcCacTa11B.1.1.3740.002375
ORF1ab/nsp367P67SCcaTca11B.1.1.4130.006897
ORF1ab/nsp367P67SCcaTca11B.1.1.4160.000905
ORF1ab/nsp367P67LcCacTa11B.1.1.4160.000905
ORF1ab/nsp367P67LcCacTa11B.1.1.4200.001006
ORF1ab/nsp367P67SCcaTca11B.1.1.4320.001266
ORF1ab/nsp367P67LcCacTa11B.1.1.4850.016667
ORF1ab/nsp367P67PccAccG11B.1.1.5210.005348
ORF1ab/nsp367P67LcCacTa11B.1.1.5210.005348
ORF1ab/nsp367P67PccAccG11B.1.1.610.008772
ORF1ab/nsp367P67MCCAATG11B.1.1.70.000001
ORF1ab/nsp367P67SCcaTca11B.1.110.30.000718
ORF1ab/nsp367P67LcCacTa11B.1.1170.0125
ORF1ab/nsp367P67TCcaAca11B.1.177.210.000076
ORF1ab/nsp367P67SCcaTca11B.1.177.230.003236
ORF1ab/nsp367P67SCcaTca11B.1.177.330.001645
ORF1ab/nsp367P67PccAccC11B.1.177.40.000211
ORF1ab/nsp367P67LcCacTa11B.1.177.40.000211
ORF1ab/nsp367P67PccAccG11B.1.177.430.001477
ORF1ab/nsp367P67LcCacTa11B.1.177.50.001242
ORF1ab/nsp367P67delCCA---11B.1.177.510.004566
ORF1ab/nsp367P67LcCacTa11B.1.177.530.002392
ORF1ab/nsp367P67PccAccT11B.1.177.600.000218
ORF1ab/nsp367P67TCcAAcT11B.1.20.000009
ORF1ab/nsp367P67delCCA---11B.1.20.000009
ORF1ab/nsp367P67QcCacAa11B.1.20.000009
ORF1ab/nsp367P67LcCacTa11B.1.2220.001692
ORF1ab/nsp367P67SCcaTca11B.1.2340.000132
ORF1ab/nsp367P67LcCacTa11B.1.2410.000812
ORF1ab/nsp367P67LcCacTa11B.1.2430.00007
ORF1ab/nsp367P67TCcaAca11B.1.2430.00007
ORF1ab/nsp367P67PccAccG11B.1.2430.00007
ORF1ab/nsp367P67SCcaTca11B.1.258.170.000104
ORF1ab/nsp367P67LcCacTa11B.1.258.170.000104
ORF1ab/nsp367P67SCcaTca11B.1.3110.000275
ORF1ab/nsp367P67LcCacTa11B.1.3110.000275
ORF1ab/nsp367P67PccAccG11B.1.3110.000275
ORF1ab/nsp367P67SCcaTca11B.1.3240.001605
ORF1ab/nsp367P67LcCacTa11B.1.3330.010526
ORF1ab/nsp367P67delCCA---11B.1.3490.000715
ORF1ab/nsp367P67QcCacAa11B.1.3510.00003
ORF1ab/nsp367P67LcCacTa11B.1.36.290.000517
ORF1ab/nsp367P67PccAccC11B.1.3600.012658
ORF1ab/nsp367P67LcCacTa11B.1.3610.001289
ORF1ab/nsp367P67TCcaAca11B.1.3690.000285
ORF1ab/nsp367P67LcCacTa11B.1.3690.000285
ORF1ab/nsp367P67TCcaAca11B.1.3770.004566
ORF1ab/nsp367P67LcCacTa11B.1.3810.007812
ORF1ab/nsp367P67LcCacTa11B.1.3890.001002
ORF1ab/nsp367P67QcCacAa11B.1.3960.000706
ORF1ab/nsp367P67LcCacTa11B.1.4030.003268
ORF1ab/nsp367P67LcCacTa11B.1.4130.004255
ORF1ab/nsp367P67del1Cca-ca11B.1.4160.001269
ORF1ab/nsp367P67delCCA---11B.1.416.10.001563
ORF1ab/nsp367P67LcCacTa11B.1.4220.000812
ORF1ab/nsp367P67LcCacTa11B.1.4260.001009
ORF1ab/nsp367P67PccAccG11B.1.4290.000024
ORF1ab/nsp367P67TCcaAca11B.1.4290.000024
ORF1ab/nsp367P67delCCA---11B.1.4290.000024
ORF1ab/nsp367P67LcCacTa11B.1.4560.003268
ORF1ab/nsp367P67SCcaTca11B.1.4590.004082
ORF1ab/nsp367P67LcCacTa11B.1.4620.007246
ORF1ab/nsp367P67LcCacTa11B.1.466.20.000391
ORF1ab/nsp367P67SCcaTca11B.1.5170.000427
ORF1ab/nsp367P67delCCA---11B.1.5170.000427
ORF1ab/nsp367P67LcCacTa11B.1.5250.000113
ORF1ab/nsp367P67PccAccG11B.1.5260.000024
ORF1ab/nsp367P67SCcaTca11B.1.5260.000024
ORF1ab/nsp367P67QcCacAa11B.1.5260.000024
ORF1ab/nsp367P67SCcaTca11B.1.5270.003704
ORF1ab/nsp367P67SCcaTca11B.1.5610.000397
ORF1ab/nsp367P67SCcaTca11B.1.5670.003333
ORF1ab/nsp367P67SCcaTca11B.1.5680.001111
ORF1ab/nsp367P67LcCacTa11B.1.5750.000303
ORF1ab/nsp367P67delCCA---11B.1.5770.000687
ORF1ab/nsp367P67LcCacTa11B.1.5800.004065
ORF1ab/nsp367P67del1Cca-ca11B.1.5900.004545
ORF1ab/nsp367P67TCcaAca11B.1.5960.000087
ORF1ab/nsp367P67delCCA---11B.1.5960.000087
ORF1ab/nsp367P67RCCaAGa11B.1.617.20.000004
ORF1ab/nsp367P67del2cCAc--11B.1.617.20.000004
ORF1ab/nsp367P67TCcaAca11B.1.617.20.000004
ORF1ab/nsp367P67LcCacTa11B.1.619.10.000641
ORF1ab/nsp367P67SCcaTca11B.1.6210.000089
ORF1ab/nsp367P67SCcaTca11B.1.6370.000073
ORF1ab/nsp367P67SCcaTca11B.1.910.002075
ORF1ab/nsp367P67SCcaTca11B.400.000364
ORF1ab/nsp367P67PccAccG11B.6.60.000889
ORF1ab/nsp367P67delCCA---11C.170.055556
ORF1ab/nsp367P67LcCacTa11C.180.002591
ORF1ab/nsp367P67LcCacTa11C.280.04
ORF1ab/nsp367P67LcCacTa11C.36.30.000567
ORF1ab/nsp367P67LcCacTa11C.40.01
ORF1ab/nsp367P67LcCacTa11D.20.000075
ORF1ab/nsp367P67SCcaTca11P.1.120.000484
ORF1ab/nsp367P67LcCacTa11P.1.130.000898
ORF1ab/nsp367P67QcCacAa11P.1.150.000232
ORF1ab/nsp367P67LcCacTa11P.1.160.000374
ORF1ab/nsp367P67LcCacTa11P.1.20.001156
ORF1ab/nsp367P67LcCacTa11Q.10.000126
ORF1ab/nsp367P67SCcaTca11Q.10.000126
ORF1ab/nsp367P67LcCacTa11Q.80.000165
ORF1ab/nsp367P67PccAccG11W.40.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.