CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 667 & Codon = gcA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3667A667AA1485AsyngcGgcA483110550.2183814718-4720

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3667A667AgcGgcA10554831All0.000202
ORF1ab/nsp3667A667AgcGgcA53612B.1.1.70.000047
ORF1ab/nsp3667A667AgcGgcA444608AY.40.000691
ORF1ab/nsp3667A667AgcGgcA44337B.1.617.20.000166
ORF1ab/nsp3667A667AgcGgcA16197AY.1030.000099
ORF1ab/nsp3667A667AgcGgcA76141AY.250.000457
ORF1ab/nsp3667A667AgcGgcA36132AY.430.000159
ORF1ab/nsp3667A667AgcGgcA6131B.1.1600.000187
ORF1ab/nsp3667A667AgcGgcA19118AY.440.000116
ORF1ab/nsp3667A667AgcGgcA59107B.1.20.00052
ORF1ab/nsp3667A667AgcGgcA3104AY.1020.00008
ORF1ab/nsp3667A667AgcGgcA2497AY.30.000239
ORF1ab/nsp3667A667AgcGgcA1092AY.4.50.001075
ORF1ab/nsp3667A667AgcGgcA781AY.200.000272
ORF1ab/nsp3667A667AgcGgcA1752B.10.000156
ORF1ab/nsp3667A667AgcGgcA249P.10.000032
ORF1ab/nsp3667A667AgcGgcA141AY.99.20.000092
ORF1ab/nsp3667A667AgcGgcA834AY.330.000534
ORF1ab/nsp3667A667AgcGgcA1031AY.390.000247
ORF1ab/nsp3667A667AgcGgcA227B.1.10.000036
ORF1ab/nsp3667A667AgcGgcA127B.1.4290.000024
ORF1ab/nsp3667A667AgcGgcA823AY.470.000249
ORF1ab/nsp3667A667AgcGgcA121B.1.1770.000013
ORF1ab/nsp3667A667AgcGgcA420AY.230.000279
ORF1ab/nsp3667A667AgcGgcA1919AY.950.01446
ORF1ab/nsp3667A667AgcGgcA1618B.1.1.280.00498
ORF1ab/nsp3667A667AgcGgcA1818B.1.4700.025281
ORF1ab/nsp3667A667AgcGgcA1717B.1.1.1710.0625
ORF1ab/nsp3667A667AgcGgcA1015AY.610.001048
ORF1ab/nsp3667A667AgcGgcA114AY.1180.000063
ORF1ab/nsp3667A667AgcGgcA414AY.260.000113
ORF1ab/nsp3667A667AgcGgcA114AY.290.000016
ORF1ab/nsp3667A667AgcGgcA714AY.50.000145
ORF1ab/nsp3667A667AgcGgcA513B.1.2580.000333
ORF1ab/nsp3667A667AgcGgcA113B.1.3510.00003
ORF1ab/nsp3667A667AgcGgcA112AY.1000.000046
ORF1ab/nsp3667A667AgcGgcA912AY.46.40.001481
ORF1ab/nsp3667A667AgcGgcA112B.1.360.000146
ORF1ab/nsp3667A667AgcGgcA312B.1.5260.000071
ORF1ab/nsp3667A667AgcGgcA411AY.98.10.000194
ORF1ab/nsp3667A667AgcGgcA68A0.002322
ORF1ab/nsp3667A667AgcGgcA58B.1.1.2140.000277
ORF1ab/nsp3667A667AgcGgcA37B.1.2430.000209
ORF1ab/nsp3667A667AgcGgcA26AY.9.20.000073
ORF1ab/nsp3667A667AgcGgcA16B.1.1.370.000193
ORF1ab/nsp3667A667AgcGgcA15AY.39.10.00004
ORF1ab/nsp3667A667AgcGgcA55B.1.221.20.02008
ORF1ab/nsp3667A667AgcGgcA35B.1.3110.000824
ORF1ab/nsp3667A667AgcGgcA55B.1.3240.008026
ORF1ab/nsp3667A667AgcGgcA14AY.460.000104
ORF1ab/nsp3667A667AgcGgcA14AY.680.000274
ORF1ab/nsp3667A667AgcGgcA44AY.840.00175
ORF1ab/nsp3667A667AgcGgcA14B.1.1.500.000679
ORF1ab/nsp3667A667AgcGgcA44B.1.1.630.001543
ORF1ab/nsp3667A667AgcGgcA33A.2.50.001497
ORF1ab/nsp3667A667AgcGgcA33AY.1050.001929
ORF1ab/nsp3667A667AgcGgcA33AY.1200.000112
ORF1ab/nsp3667A667AgcGgcA23AY.550.001835
ORF1ab/nsp3667A667AgcGgcA13P.1.140.000048
ORF1ab/nsp3667A667AgcGgcA220.111111
ORF1ab/nsp3667A667AgcGgcA12AY.34.10.00051
ORF1ab/nsp3667A667AgcGgcA12AY.360.000148
ORF1ab/nsp3667A667AgcGgcA12AY.5.30.000337
ORF1ab/nsp3667A667AgcGgcA12AY.650.000533
ORF1ab/nsp3667A667AgcGgcA22AY.790.002421
ORF1ab/nsp3667A667AgcGgcA12AY.850.000427
ORF1ab/nsp3667A667AgcGgcA12B.1.1.2770.000759
ORF1ab/nsp3667A667AgcGgcA22B.1.160.280.005848
ORF1ab/nsp3667A667AgcGgcA22B.1.5610.000794
ORF1ab/nsp3667A667AgcGgcA11AY.4.30.000842
ORF1ab/nsp3667A667AgcGgcA11AY.510.000909
ORF1ab/nsp3667A667AgcGgcA11AY.530.000288
ORF1ab/nsp3667A667AgcGgcA11B.1.1.2530.002506
ORF1ab/nsp3667A667AgcGgcA11B.1.1.3330.001076
ORF1ab/nsp3667A667AgcGgcA11B.1.177.190.001431
ORF1ab/nsp3667A667AgcGgcA11B.1.177.210.000076
ORF1ab/nsp3667A667AgcGgcA11B.1.2410.000812
ORF1ab/nsp3667A667AgcGgcA11B.1.258.210.007752
ORF1ab/nsp3667A667AgcGgcA11B.1.36.170.000494
ORF1ab/nsp3667A667AgcGgcA11B.1.4260.001009
ORF1ab/nsp3667A667AgcGgcA11B.1.428.20.033333
ORF1ab/nsp3667A667AgcGgcA11B.1.466.20.000391
ORF1ab/nsp3667A667AgcGgcA11B.1.5180.011765
ORF1ab/nsp3667A667AgcGgcA11B.1.5750.000303
ORF1ab/nsp3667A667AgcGgcA11B.1.5850.027778
ORF1ab/nsp3667A667AgcGgcA11B.1.6230.000536
ORF1ab/nsp3667A667AgcGgcA11P.1.150.000232
ORF1ab/nsp3667A667AgcGgcA11Q.80.000165