CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 646 & Codon = cgT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3646R646RR1464RsyncgGcgT20063560.1774684655-4657

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3646R646RcgGcgT3562006All0.000068
ORF1ab/nsp3646R646RcgGcgT220220B.1.1490.753425
ORF1ab/nsp3646R646RcgGcgT1287AY.40.000019
ORF1ab/nsp3646R646RcgGcgT1864B.1.1.70.000016
ORF1ab/nsp3646R646RcgGcgT144B.1.20.000009
ORF1ab/nsp3646R646RcgGcgT336B.1.1770.00004
ORF1ab/nsp3646R646RcgGcgT731B.1.617.20.000026
ORF1ab/nsp3646R646RcgGcgT718AY.440.000043
ORF1ab/nsp3646R646RcgGcgT1414B.1.2050.333333
ORF1ab/nsp3646R646RcgGcgT612B.10.000055
ORF1ab/nsp3646R646RcgGcgT510AY.30.00005
ORF1ab/nsp3646R646RcgGcgT99AY.290.000142
ORF1ab/nsp3646R646RcgGcgT77AY.330.000467
ORF1ab/nsp3646R646RcgGcgT16AY.1030.000006
ORF1ab/nsp3646R646RcgGcgT25B.1.10.000036
ORF1ab/nsp3646R646RcgGcgT24AY.1020.000053
ORF1ab/nsp3646R646RcgGcgT14B.1.1.370.000193
ORF1ab/nsp3646R646RcgGcgT44B.1.177.600.000874
ORF1ab/nsp3646R646RcgGcgT130.055556
ORF1ab/nsp3646R646RcgGcgT33AY.1000.000138
ORF1ab/nsp3646R646RcgGcgT33AY.4.20.000065
ORF1ab/nsp3646R646RcgGcgT33AY.98.10.000145
ORF1ab/nsp3646R646RcgGcgT33B.1.2400.000647
ORF1ab/nsp3646R646RcgGcgT23B.1.5260.000047
ORF1ab/nsp3646R646RcgGcgT12AY.250.000006
ORF1ab/nsp3646R646RcgGcgT12AY.790.001211
ORF1ab/nsp3646R646RcgGcgT22B.1.1.5190.000079
ORF1ab/nsp3646R646RcgGcgT12B.1.2210.000071
ORF1ab/nsp3646R646RcgGcgT22B.1.390.007812
ORF1ab/nsp3646R646RcgGcgT11AY.130.000161
ORF1ab/nsp3646R646RcgGcgT11AY.750.000056
ORF1ab/nsp3646R646RcgGcgT11AY.760.004831
ORF1ab/nsp3646R646RcgGcgT11AY.880.000884
ORF1ab/nsp3646R646RcgGcgT11B.1.1600.000031
ORF1ab/nsp3646R646RcgGcgT11B.1.1700.00431
ORF1ab/nsp3646R646RcgGcgT11B.1.2100.002132
ORF1ab/nsp3646R646RcgGcgT11B.1.258.170.000104
ORF1ab/nsp3646R646RcgGcgT11B.1.3510.00003
ORF1ab/nsp3646R646RcgGcgT11B.1.3750.00082
ORF1ab/nsp3646R646RcgGcgT11B.1.4160.001269
ORF1ab/nsp3646R646RcgGcgT11B.1.5030.002488
ORF1ab/nsp3646R646RcgGcgT11B.1.5960.000087
ORF1ab/nsp3646R646RcgGcgT11B.4.50.011905
ORF1ab/nsp3646R646RcgGcgT11R.10.00009