CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 646

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3646R646WR1464WnonsynCggTgg2853285314655-4657
ORF1ab/nsp3646R646RR1464RsyncgGcgA200614770.7362914655-4657
ORF1ab/nsp3646R646RR1464RsyncgGcgT20063560.1774684655-4657
ORF1ab/nsp3646R646RR1464RsynCggAgg20061700.08474584655-4657
ORF1ab/nsp3646R646RR1464RsyncgGcgC200630.001495514655-4657
ORF1ab/nsp3646R646QR1464QnonsyncGgcAg141314120.9992924655-4657
ORF1ab/nsp3646R646QR1464QnonsyncGGcAA141310.0007077144655-4657
ORF1ab/nsp3646R646LR1464LnonsyncGgcTg1211150.9504134655-4657
ORF1ab/nsp3646R646LR1464LnonsynCGgTTg12120.01652894655-4657
ORF1ab/nsp3646R646LR1464LnonsyncGGcTT12120.01652894655-4657
ORF1ab/nsp3646R646LR1464LnonsynCGGTTA12110.008264464655-4657
ORF1ab/nsp3646R646LR1464LnonsyncGGcTA12110.008264464655-4657
ORF1ab/nsp3646R646delR1464deldelCGG---575714655-4657
ORF1ab/nsp3646R646GR1464GnonsynCggGgg242414655-4657
ORF1ab/nsp3646R646del1R1464del1delcgGcg-1070.74655-4657
ORF1ab/nsp3646R646del1R1464del1delCgg-gg1030.34655-4657
ORF1ab/nsp3646R646HR1464HnonsyncGGcAT760.8571434655-4657
ORF1ab/nsp3646R646HR1464HnonsyncGGcAC710.1428574655-4657
ORF1ab/nsp3646R646XR1464XnonsynCGgTAg630.54655-4657
ORF1ab/nsp3646R646XR1464XnonsynCgGTgA620.3333334655-4657
ORF1ab/nsp3646R646XR1464XnonsynCGGTAA610.1666674655-4657
ORF1ab/nsp3646R646PR1464PnonsyncGgcCg5514655-4657
ORF1ab/nsp3646R646CR1464CnonsynCgGTgT430.754655-4657
ORF1ab/nsp3646R646CR1464CnonsynCgGTgC410.254655-4657
ORF1ab/nsp3646R646FR1464FnonsynCGGTTT2214655-4657
ORF1ab/nsp3646R646YR1464YnonsynCGGTAC210.54655-4657
ORF1ab/nsp3646R646YR1464YnonsynCGGTAT210.54655-4657
ORF1ab/nsp3646R646SR1464SnonsynCGgTCg1114655-4657
ORF1ab/nsp3646R646KR1464KnonsynCGgAAg1114655-4657
ORF1ab/nsp3646R646ER1464EnonsynCGgGAg1114655-4657
ORF1ab/nsp3646R646MR1464MnonsynCGgATg1114655-4657
ORF1ab/nsp3646R646IR1464InonsynCGGATT1114655-4657

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3646R646WCggTgg28532853All0.000546
ORF1ab/nsp3646R646RcgGcgA14772006All0.000282
ORF1ab/nsp3646R646RcgGcgT3562006All0.000068
ORF1ab/nsp3646R646RCggAgg1702006All0.000033
ORF1ab/nsp3646R646RcgGcgC32006All0.000001
ORF1ab/nsp3646R646QcGgcAg14121413All0.00027
ORF1ab/nsp3646R646QcGGcAA11413All0
ORF1ab/nsp3646R646RcgGcgA11471147AY.460.11938
ORF1ab/nsp3646R646WCggTgg878878B.1.1.70.000786
ORF1ab/nsp3646R646QcGgcAg623623B.1.1.70.000558
ORF1ab/nsp3646R646WCggTgg264264B.1.1.440.636145
ORF1ab/nsp3646R646WCggTgg244244AY.40.00038
ORF1ab/nsp3646R646RcgGcgT220220B.1.1490.753425
ORF1ab/nsp3646R646QcGgcAg183183AY.40.000285
ORF1ab/nsp3646R646RcgGcgA180180B.1.3200.224159
ORF1ab/nsp3646R646QcGgcAg164164B.1.617.20.000618
ORF1ab/nsp3646R646LcGgcTg115121All0.000022
ORF1ab/nsp3646R646LcGGcTT2121All0
ORF1ab/nsp3646R646LCGgTTg2121All0
ORF1ab/nsp3646R646LcGGcTA1121All0
ORF1ab/nsp3646R646LCGGTTA1121All0
ORF1ab/nsp3646R646WCggTgg115115AY.430.00051
ORF1ab/nsp3646R646RCggAgg6387AY.40.000098
ORF1ab/nsp3646R646RcgGcgA1287AY.40.000019
ORF1ab/nsp3646R646RcgGcgT1287AY.40.000019
ORF1ab/nsp3646R646WCggTgg7777AY.1030.000478
ORF1ab/nsp3646R646WCggTgg6868B.1.3610.087629
ORF1ab/nsp3646R646RcgGcgA2764B.1.1.70.000024
ORF1ab/nsp3646R646RCggAgg1964B.1.1.70.000017
ORF1ab/nsp3646R646RcgGcgT1864B.1.1.70.000016
ORF1ab/nsp3646R646delCGG---5757All0.000011
ORF1ab/nsp3646R646WCggTgg5555B.1.10.000998
ORF1ab/nsp3646R646WCggTgg5252AY.440.000317
ORF1ab/nsp3646R646WCggTgg5151AY.250.000307
ORF1ab/nsp3646R646QcGgcAg5050AY.30.000497
ORF1ab/nsp3646R646WCggTgg4949AY.390.001211
ORF1ab/nsp3646R646WCggTgg4747B.1.1770.000619
ORF1ab/nsp3646R646RCggAgg4344B.1.20.000379
ORF1ab/nsp3646R646RcgGcgT144B.1.20.000009
ORF1ab/nsp3646R646WCggTgg4242B.1.20.00037
ORF1ab/nsp3646R646WCggTgg3939B.1.1.2140.002163
ORF1ab/nsp3646R646QcGgcAg3838B.1.20.000335
ORF1ab/nsp3646R646WCggTgg3737B.1.617.20.000139
ORF1ab/nsp3646R646WCggTgg3636AY.30.000358
ORF1ab/nsp3646R646RcgGcgA3336B.1.1770.000435
ORF1ab/nsp3646R646RcgGcgT336B.1.1770.00004
ORF1ab/nsp3646R646WCggTgg3333B.1.4290.000776
ORF1ab/nsp3646R646LcGgcTg3232AY.430.000142
ORF1ab/nsp3646R646QcGgcAg3232AY.430.000142
ORF1ab/nsp3646R646WCggTgg3232B.30.026578
ORF1ab/nsp3646R646QcGgcAg3131AY.250.000186
ORF1ab/nsp3646R646WCggTgg3131B.1.4270.001565
ORF1ab/nsp3646R646RcgGcgA1731B.1.617.20.000064
ORF1ab/nsp3646R646RcgGcgT731B.1.617.20.000026
ORF1ab/nsp3646R646RCggAgg631B.1.617.20.000023
ORF1ab/nsp3646R646RcgGcgC131B.1.617.20.000004
ORF1ab/nsp3646R646WCggTgg3131P.10.000488
ORF1ab/nsp3646R646QcGgcAg2929AY.1130.004129
ORF1ab/nsp3646R646WCggTgg2727AY.420.001086
ORF1ab/nsp3646R646WCggTgg2727AY.710.012827
ORF1ab/nsp3646R646GCggGgg2424All0.000005
ORF1ab/nsp3646R646QcGgcAg2424AY.90.001622
ORF1ab/nsp3646R646WCggTgg2323B.10.000211
ORF1ab/nsp3646R646WCggTgg2121AY.99.20.001935
ORF1ab/nsp3646R646QcGgcAg1919B.10.000174
ORF1ab/nsp3646R646RcgGcgA918AY.440.000055
ORF1ab/nsp3646R646RcgGcgT718AY.440.000043
ORF1ab/nsp3646R646RCggAgg218AY.440.000012
ORF1ab/nsp3646R646delCGG---1818B.1.1.70.000016
ORF1ab/nsp3646R646WCggTgg1818B.1.2430.001253
ORF1ab/nsp3646R646WCggTgg1616AY.290.000252
ORF1ab/nsp3646R646WCggTgg1616AY.4.40.006547
ORF1ab/nsp3646R646WCggTgg1515AY.1160.004302
ORF1ab/nsp3646R646WCggTgg1515AY.460.001561
ORF1ab/nsp3646R646LcGgcTg1414AY.40.000022
ORF1ab/nsp3646R646WCggTgg1414AY.540.001335
ORF1ab/nsp3646R646QcGgcAg1414AY.760.067633
ORF1ab/nsp3646R646RcgGcgT1414B.1.2050.333333
ORF1ab/nsp3646R646QcGgcAg1313AY.1030.000081
ORF1ab/nsp3646R646WCggTgg1313AY.46.60.000939
ORF1ab/nsp3646R646WCggTgg1212AY.1020.000318
ORF1ab/nsp3646R646GCggGgg1212AY.440.000073
ORF1ab/nsp3646R646RcgGcgT612B.10.000055
ORF1ab/nsp3646R646RcgGcgA312B.10.000027
ORF1ab/nsp3646R646RCggAgg312B.10.000027
ORF1ab/nsp3646R646RcgGcgA1212B.1.4270.000606
ORF1ab/nsp3646R646QcGgcAg1212B.1.4290.000282
ORF1ab/nsp3646R646RCggAgg1111AY.116.10.003426
ORF1ab/nsp3646R646WCggTgg1111AY.1180.000689
ORF1ab/nsp3646R646WCggTgg1111AY.870.009159
ORF1ab/nsp3646R646QcGgcAg1111B.1.1770.000145
ORF1ab/nsp3646R646WCggTgg1111B.1.177.600.002403
ORF1ab/nsp3646R646WCggTgg1111B.1.5960.000959
ORF1ab/nsp3646R646del1cgGcg-710All0.000001
ORF1ab/nsp3646R646del1Cgg-gg310All0.000001
ORF1ab/nsp3646R646RcgGcgT510AY.30.00005
ORF1ab/nsp3646R646RcgGcgA510AY.30.00005
ORF1ab/nsp3646R646WCggTgg1010AY.39.10.000396
ORF1ab/nsp3646R646QcGgcAg1010AY.440.000061
ORF1ab/nsp3646R646WCggTgg1010AY.7.20.005593
ORF1ab/nsp3646R646WCggTgg1010B.1.2650.012706
ORF1ab/nsp3646R646QcGgcAg99AY.1000.000414
ORF1ab/nsp3646R646WCggTgg99AY.1140.00208
ORF1ab/nsp3646R646QcGgcAg99AY.200.00035
ORF1ab/nsp3646R646RcgGcgT99AY.290.000142
ORF1ab/nsp3646R646WCggTgg99B.1.1.3340.147541
ORF1ab/nsp3646R646WCggTgg99B.1.3510.000268
ORF1ab/nsp3646R646WCggTgg99D.20.000675
ORF1ab/nsp3646R646QcGgcAg88AY.330.000534
ORF1ab/nsp3646R646WCggTgg88AY.340.000776
ORF1ab/nsp3646R646QcGgcAg88AY.390.000198
ORF1ab/nsp3646R646WCggTgg88AY.50.000165
ORF1ab/nsp3646R646WCggTgg88AY.5.40.002214
ORF1ab/nsp3646R646WCggTgg88AY.98.10.000387
ORF1ab/nsp3646R646QcGgcAg88B.1.10.000145
ORF1ab/nsp3646R646LcGgcTg88B.1.1.70.000007
ORF1ab/nsp3646R646LcGgcTg88B.1.1600.00025
ORF1ab/nsp3646R646WCggTgg88B.1.438.10.000858
ORF1ab/nsp3646R646WCggTgg88B.1.5260.000188
ORF1ab/nsp3646R646HcGGcAT67All0.000001
ORF1ab/nsp3646R646HcGGcAC17All0
ORF1ab/nsp3646R646QcGgcAg77AY.1020.000186
ORF1ab/nsp3646R646WCggTgg77AY.200.000272
ORF1ab/nsp3646R646RcgGcgT77AY.330.000467
ORF1ab/nsp3646R646WCggTgg77AY.4.20.000152
ORF1ab/nsp3646R646WCggTgg77B.1.177.810.001325
ORF1ab/nsp3646R646LcGgcTg77B.1.617.20.000026
ORF1ab/nsp3646R646XCGgTAg36All0.000001
ORF1ab/nsp3646R646XCgGTgA26All0
ORF1ab/nsp3646R646XCGGTAA16All0
ORF1ab/nsp3646R646RCggAgg56AY.1030.000031
ORF1ab/nsp3646R646RcgGcgT16AY.1030.000006
ORF1ab/nsp3646R646QcGgcAg66AY.420.000241
ORF1ab/nsp3646R646WCggTgg66AY.620.002614
ORF1ab/nsp3646R646WCggTgg66AY.750.000336
ORF1ab/nsp3646R646QcGgcAg66B.1.1.3180.001811
ORF1ab/nsp3646R646LcGgcTg66B.1.1770.000079
ORF1ab/nsp3646R646WCggTgg66B.1.177.350.004147
ORF1ab/nsp3646R646QcGgcAg66B.1.3510.000178
ORF1ab/nsp3646R646QcGgcAg66B.1.5260.000141
ORF1ab/nsp3646R646WCggTgg66C.36.30.003403
ORF1ab/nsp3646R646QcGgcAg66P.10.000095
ORF1ab/nsp3646R646XCGgTAg350.166667
ORF1ab/nsp3646R646XCgGTgA150.055556
ORF1ab/nsp3646R646XCGGTAA150.055556
ORF1ab/nsp3646R646PcGgcCg55All0.000001
ORF1ab/nsp3646R646GCggGgg55AY.40.000008
ORF1ab/nsp3646R646WCggTgg55AY.46.10.005133
ORF1ab/nsp3646R646QcGgcAg55AY.60.000206
ORF1ab/nsp3646R646WCggTgg55AY.610.000524
ORF1ab/nsp3646R646WCggTgg55AY.840.002187
ORF1ab/nsp3646R646RcgGcgA35B.1.10.000054
ORF1ab/nsp3646R646RcgGcgT25B.1.10.000036
ORF1ab/nsp3646R646WCggTgg55B.1.1.1610.017668
ORF1ab/nsp3646R646RCggAgg55B.1.1.2910.003712
ORF1ab/nsp3646R646del1cgGcg-45B.1.1.70.000004
ORF1ab/nsp3646R646del1Cgg-gg15B.1.1.70.000001
ORF1ab/nsp3646R646WCggTgg55B.1.177.570.001405
ORF1ab/nsp3646R646LCGGTTA15B.1.2210.000071
ORF1ab/nsp3646R646LCGgTTg15B.1.2210.000071
ORF1ab/nsp3646R646LcGGcTT15B.1.2210.000071
ORF1ab/nsp3646R646LcGGcTA15B.1.2210.000071
ORF1ab/nsp3646R646LcGgcTg15B.1.2210.000071
ORF1ab/nsp3646R646QcGgcAg55B.1.2580.000333
ORF1ab/nsp3646R646WCggTgg55B.1.4480.013123
ORF1ab/nsp3646R646QcGgcAg55B.1.617.10.000645
ORF1ab/nsp3646R646LcGgcTg55D.20.000375
ORF1ab/nsp3646R646WCggTgg55Q.80.000825
ORF1ab/nsp3646R646QcGgcAg340.166667
ORF1ab/nsp3646R646QcGGcAA140.055556
ORF1ab/nsp3646R646CCgGTgT34All0.000001
ORF1ab/nsp3646R646CCgGTgC14All0
ORF1ab/nsp3646R646RcgGcgA24AY.1020.000053
ORF1ab/nsp3646R646RcgGcgT24AY.1020.000053
ORF1ab/nsp3646R646WCggTgg44AY.260.000113
ORF1ab/nsp3646R646delCGG---44AY.40.000006
ORF1ab/nsp3646R646WCggTgg44AY.4.50.00043
ORF1ab/nsp3646R646WCggTgg44AY.470.000124
ORF1ab/nsp3646R646WCggTgg44AY.670.001857
ORF1ab/nsp3646R646WCggTgg44AY.75.10.000721
ORF1ab/nsp3646R646WCggTgg44B0.000511
ORF1ab/nsp3646R646RCggAgg34B.1.1.370.000579
ORF1ab/nsp3646R646RcgGcgT14B.1.1.370.000193
ORF1ab/nsp3646R646HcGGcAT44B.1.1490.013699
ORF1ab/nsp3646R646RcgGcgT44B.1.177.600.000874
ORF1ab/nsp3646R646WCggTgg44B.1.2340.000528
ORF1ab/nsp3646R646QcGgcAg44B.1.30.010471
ORF1ab/nsp3646R646WCggTgg44B.1.5250.000453
ORF1ab/nsp3646R646WCggTgg44B.1.6050.02381
ORF1ab/nsp3646R646QcGgcAg44C.370.000464
ORF1ab/nsp3646R646QcGgcAg44Q.80.00066
ORF1ab/nsp3646R646WCggTgg330.166667
ORF1ab/nsp3646R646RcgGcgA130.055556
ORF1ab/nsp3646R646LCGgTTg130.055556
ORF1ab/nsp3646R646RcgGcgC130.055556
ORF1ab/nsp3646R646RcgGcgT130.055556
ORF1ab/nsp3646R646LcGGcTT130.055556
ORF1ab/nsp3646R646LcGgcTg130.055556
ORF1ab/nsp3646R646RcgGcgT33AY.1000.000138
ORF1ab/nsp3646R646WCggTgg33AY.1110.000549
ORF1ab/nsp3646R646WCggTgg33AY.1190.000106
ORF1ab/nsp3646R646WCggTgg33AY.230.000209
ORF1ab/nsp3646R646WCggTgg33AY.3.10.000256
ORF1ab/nsp3646R646WCggTgg33AY.360.000445
ORF1ab/nsp3646R646RcgGcgT33AY.4.20.000065
ORF1ab/nsp3646R646RcgGcgA33AY.580.002722
ORF1ab/nsp3646R646WCggTgg33AY.9.10.000251
ORF1ab/nsp3646R646WCggTgg33AY.9.20.00011
ORF1ab/nsp3646R646WCggTgg33AY.910.002191
ORF1ab/nsp3646R646RcgGcgT33AY.98.10.000145
ORF1ab/nsp3646R646LcGgcTg33B.1.1.10.00098
ORF1ab/nsp3646R646WCggTgg33B.1.1.1760.001318
ORF1ab/nsp3646R646WCggTgg33B.1.1.4340.001046
ORF1ab/nsp3646R646QcGgcAg33B.1.1.5190.000119
ORF1ab/nsp3646R646WCggTgg33B.1.1600.000094
ORF1ab/nsp3646R646WCggTgg33B.1.2210.000213
ORF1ab/nsp3646R646RcgGcgT33B.1.2400.000647
ORF1ab/nsp3646R646QcGgcAg33B.1.2430.000209
ORF1ab/nsp3646R646WCggTgg33B.1.2580.0002
ORF1ab/nsp3646R646WCggTgg33B.1.3750.002459
ORF1ab/nsp3646R646WCggTgg33B.1.5030.007463
ORF1ab/nsp3646R646RcgGcgT23B.1.5260.000047
ORF1ab/nsp3646R646RcgGcgA13B.1.5260.000024
ORF1ab/nsp3646R646WCggTgg33B.1.619.10.001924
ORF1ab/nsp3646R646WCggTgg33B.1.6200.002838
ORF1ab/nsp3646R646WCggTgg33B.1.6210.000266
ORF1ab/nsp3646R646RcgGcgA23B.1.621.10.001012
ORF1ab/nsp3646R646RCggAgg13B.1.621.10.000506
ORF1ab/nsp3646R646WCggTgg33B.1.6230.001609
ORF1ab/nsp3646R646WCggTgg33B.1.6370.000219
ORF1ab/nsp3646R646WCggTgg33P.1.140.000143
ORF1ab/nsp3646R646HcGGcAT120.055556
ORF1ab/nsp3646R646YCGGTAC120.055556
ORF1ab/nsp3646R646YCGGTAT120.055556
ORF1ab/nsp3646R646CCgGTgT120.055556
ORF1ab/nsp3646R646HcGGcAC120.055556
ORF1ab/nsp3646R646CCgGTgC120.055556
ORF1ab/nsp3646R646LcGgcTg22AD.20.000438
ORF1ab/nsp3646R646FCGGTTT22All0
ORF1ab/nsp3646R646YCGGTAT12All0
ORF1ab/nsp3646R646YCGGTAC12All0
ORF1ab/nsp3646R646WCggTgg22AY.1000.000092
ORF1ab/nsp3646R646WCggTgg22AY.120.10.000642
ORF1ab/nsp3646R646RcgGcgT12AY.250.000006
ORF1ab/nsp3646R646RcgGcgA12AY.250.000006
ORF1ab/nsp3646R646QcGgcAg22AY.260.000057
ORF1ab/nsp3646R646QcGgcAg22AY.270.000129
ORF1ab/nsp3646R646GCggGgg22AY.30.00002
ORF1ab/nsp3646R646WCggTgg22AY.330.000134
ORF1ab/nsp3646R646LcGgcTg22AY.360.000296
ORF1ab/nsp3646R646WCggTgg22AY.380.000999
ORF1ab/nsp3646R646RCggAgg12AY.390.000025
ORF1ab/nsp3646R646RcgGcgA12AY.390.000025
ORF1ab/nsp3646R646delCGG---22AY.4.50.000215
ORF1ab/nsp3646R646LcGgcTg22AY.440.000012
ORF1ab/nsp3646R646RcgGcgA22AY.450.000243
ORF1ab/nsp3646R646QcGgcAg22AY.470.000062
ORF1ab/nsp3646R646WCggTgg22AY.680.000547
ORF1ab/nsp3646R646RcgGcgA22AY.70.000392
ORF1ab/nsp3646R646WCggTgg22AY.700.000417
ORF1ab/nsp3646R646LcGgcTg22AY.750.000112
ORF1ab/nsp3646R646QcGgcAg22AY.750.000112
ORF1ab/nsp3646R646RcgGcgA12AY.790.001211
ORF1ab/nsp3646R646RcgGcgT12AY.790.001211
ORF1ab/nsp3646R646WCggTgg22AY.980.000158
ORF1ab/nsp3646R646RCggAgg12B0.000128
ORF1ab/nsp3646R646RcgGcgA12B0.000128
ORF1ab/nsp3646R646delCGG---22B.10.000018
ORF1ab/nsp3646R646LcGgcTg22B.10.000018
ORF1ab/nsp3646R646WCggTgg22B.1.1.10.000653
ORF1ab/nsp3646R646WCggTgg22B.1.1.2880.003831
ORF1ab/nsp3646R646WCggTgg22B.1.1.2910.001485
ORF1ab/nsp3646R646WCggTgg22B.1.1.3060.000877
ORF1ab/nsp3646R646WCggTgg22B.1.1.3660.031746
ORF1ab/nsp3646R646RcgGcgT22B.1.1.5190.000079
ORF1ab/nsp3646R646WCggTgg22B.1.1460.008475
ORF1ab/nsp3646R646delCGG---22B.1.1770.000026
ORF1ab/nsp3646R646WCggTgg22B.1.177.40.000422
ORF1ab/nsp3646R646RcgGcgA12B.1.2210.000071
ORF1ab/nsp3646R646RcgGcgT12B.1.2210.000071
ORF1ab/nsp3646R646WCggTgg22B.1.258.170.000208
ORF1ab/nsp3646R646WCggTgg22B.1.36.180.00084
ORF1ab/nsp3646R646RcgGcgT22B.1.390.007812
ORF1ab/nsp3646R646QcGgcAg22B.1.4270.000101
ORF1ab/nsp3646R646LcGgcTg22B.1.4280.002041
ORF1ab/nsp3646R646WCggTgg22B.1.466.20.000782
ORF1ab/nsp3646R646WCggTgg22B.1.5640.000852
ORF1ab/nsp3646R646WCggTgg22C.160.002121
ORF1ab/nsp3646R646delCGG---22P.10.000032
ORF1ab/nsp3646R646QcGgcAg22P.1.150.000465
ORF1ab/nsp3646R646WCggTgg22Q.10.000253
ORF1ab/nsp3646R646QcGgcAg22Q.10.000253
ORF1ab/nsp3646R646delCGG---22U.30.007722
ORF1ab/nsp3646R646FCGGTTT110.055556
ORF1ab/nsp3646R646RcgGcgA11A0.000387
ORF1ab/nsp3646R646WCggTgg11A.2.20.001689
ORF1ab/nsp3646R646delCGG---11A.2.20.001689
ORF1ab/nsp3646R646LcGgcTg11A.2.40.003367
ORF1ab/nsp3646R646QcGgcAg11A.2.50.000499
ORF1ab/nsp3646R646KCGgAAg11All0
ORF1ab/nsp3646R646SCGgTCg11All0
ORF1ab/nsp3646R646ICGGATT11All0
ORF1ab/nsp3646R646MCGgATg11All0
ORF1ab/nsp3646R646ECGgGAg11All0
ORF1ab/nsp3646R646delCGG---11AY.1000.000046
ORF1ab/nsp3646R646WCggTgg11AY.1010.00049
ORF1ab/nsp3646R646LcGgcTg11AY.1020.000027
ORF1ab/nsp3646R646WCggTgg11AY.1060.000335
ORF1ab/nsp3646R646QcGgcAg11AY.1100.000113
ORF1ab/nsp3646R646RCggAgg11AY.1130.000142
ORF1ab/nsp3646R646WCggTgg11AY.1130.000142
ORF1ab/nsp3646R646WCggTgg11AY.1170.000085
ORF1ab/nsp3646R646QcGgcAg11AY.1170.000085
ORF1ab/nsp3646R646QcGgcAg11AY.1190.000035
ORF1ab/nsp3646R646LcGgcTg11AY.1190.000035
ORF1ab/nsp3646R646delCGG---11AY.1200.000037
ORF1ab/nsp3646R646HcGGcAT11AY.120.10.000321
ORF1ab/nsp3646R646RcgGcgT11AY.130.000161
ORF1ab/nsp3646R646RcgGcgA11AY.170.008197
ORF1ab/nsp3646R646QcGgcAg11AY.210.001898
ORF1ab/nsp3646R646del1cgGcg-11AY.250.000006
ORF1ab/nsp3646R646LcGgcTg11AY.250.000006
ORF1ab/nsp3646R646LcGgcTg11AY.260.000028
ORF1ab/nsp3646R646delCGG---11AY.30.00001
ORF1ab/nsp3646R646WCggTgg11AY.320.000532
ORF1ab/nsp3646R646RcgGcgA11AY.340.000097
ORF1ab/nsp3646R646WCggTgg11AY.34.10.00051
ORF1ab/nsp3646R646WCggTgg11AY.350.000233
ORF1ab/nsp3646R646RCggAgg11AY.360.000148
ORF1ab/nsp3646R646del1Cgg-gg11AY.360.000148
ORF1ab/nsp3646R646QcGgcAg11AY.360.000148
ORF1ab/nsp3646R646QcGgcAg11AY.39.10.00004
ORF1ab/nsp3646R646WCggTgg11AY.4.30.000842
ORF1ab/nsp3646R646WCggTgg11AY.410.000294
ORF1ab/nsp3646R646RCggAgg11AY.430.000004
ORF1ab/nsp3646R646GCggGgg11AY.430.000004
ORF1ab/nsp3646R646ECGgGAg11AY.430.000004
ORF1ab/nsp3646R646MCGgATg11AY.430.000004
ORF1ab/nsp3646R646CCgGTgT11AY.440.000006
ORF1ab/nsp3646R646PcGgcCg11AY.440.000006
ORF1ab/nsp3646R646delCGG---11AY.440.000006
ORF1ab/nsp3646R646QcGgcAg11AY.450.000122
ORF1ab/nsp3646R646WCggTgg11AY.46.30.000934
ORF1ab/nsp3646R646RcgGcgA11AY.46.60.000072
ORF1ab/nsp3646R646RcgGcgA11AY.470.000031
ORF1ab/nsp3646R646QcGgcAg11AY.50.000021
ORF1ab/nsp3646R646WCggTgg11AY.510.000909
ORF1ab/nsp3646R646WCggTgg11AY.580.000907
ORF1ab/nsp3646R646WCggTgg11AY.590.00053
ORF1ab/nsp3646R646WCggTgg11AY.60.000041
ORF1ab/nsp3646R646RcgGcgA11AY.60.000041
ORF1ab/nsp3646R646LcGgcTg11AY.610.000105
ORF1ab/nsp3646R646QcGgcAg11AY.610.000105
ORF1ab/nsp3646R646delCGG---11AY.670.000464
ORF1ab/nsp3646R646WCggTgg11AY.70.000196
ORF1ab/nsp3646R646delCGG---11AY.720.001361
ORF1ab/nsp3646R646WCggTgg11AY.740.000116
ORF1ab/nsp3646R646RcgGcgT11AY.750.000056
ORF1ab/nsp3646R646LcGgcTg11AY.75.10.00018
ORF1ab/nsp3646R646RcgGcgT11AY.760.004831
ORF1ab/nsp3646R646QcGgcAg11AY.790.001211
ORF1ab/nsp3646R646ICGGATT11AY.820.001357
ORF1ab/nsp3646R646QcGgcAg11AY.840.000437
ORF1ab/nsp3646R646QcGgcAg11AY.860.00083
ORF1ab/nsp3646R646RcgGcgT11AY.880.000884
ORF1ab/nsp3646R646QcGgcAg11AY.9.20.000037
ORF1ab/nsp3646R646LcGgcTg11AY.9.20.000037
ORF1ab/nsp3646R646LcGgcTg11AY.910.00073
ORF1ab/nsp3646R646WCggTgg11AY.930.000273
ORF1ab/nsp3646R646KCGgAAg11AY.980.000079
ORF1ab/nsp3646R646QcGgcAg11AY.980.000079
ORF1ab/nsp3646R646QcGgcAg11AY.98.10.000048
ORF1ab/nsp3646R646delCGG---11AY.990.001049
ORF1ab/nsp3646R646WCggTgg11AY.99.10.001553
ORF1ab/nsp3646R646delCGG---11B0.000128
ORF1ab/nsp3646R646PcGgcCg11B0.000128
ORF1ab/nsp3646R646GCggGgg11B.10.000009
ORF1ab/nsp3646R646PcGgcCg11B.10.000009
ORF1ab/nsp3646R646LcGgcTg11B.1.10.000018
ORF1ab/nsp3646R646del1Cgg-gg11B.1.10.000018
ORF1ab/nsp3646R646RCggAgg11B.1.1.100.001115
ORF1ab/nsp3646R646WCggTgg11B.1.1.100.001115
ORF1ab/nsp3646R646delCGG---11B.1.1.1420.017544
ORF1ab/nsp3646R646WCggTgg11B.1.1.1700.001247
ORF1ab/nsp3646R646WCggTgg11B.1.1.2040.00304
ORF1ab/nsp3646R646WCggTgg11B.1.1.2070.001182
ORF1ab/nsp3646R646QcGgcAg11B.1.1.2160.00089
ORF1ab/nsp3646R646WCggTgg11B.1.1.2200.001859
ORF1ab/nsp3646R646WCggTgg11B.1.1.2430.004082
ORF1ab/nsp3646R646LcGgcTg11B.1.1.3060.000438
ORF1ab/nsp3646R646WCggTgg11B.1.1.330.000421
ORF1ab/nsp3646R646WCggTgg11B.1.1.340.013158
ORF1ab/nsp3646R646WCggTgg11B.1.1.370.000193
ORF1ab/nsp3646R646QcGgcAg11B.1.1.3720.000689
ORF1ab/nsp3646R646WCggTgg11B.1.1.3970.002252
ORF1ab/nsp3646R646WCggTgg11B.1.1.4090.002833
ORF1ab/nsp3646R646delCGG---11B.1.1.4090.002833
ORF1ab/nsp3646R646QcGgcAg11B.1.1.4340.000349
ORF1ab/nsp3646R646WCggTgg11B.1.1.4350.034483
ORF1ab/nsp3646R646WCggTgg11B.1.1.5120.028571
ORF1ab/nsp3646R646delCGG---11B.1.1.5190.00004
ORF1ab/nsp3646R646WCggTgg11B.1.1.5190.00004
ORF1ab/nsp3646R646GCggGgg11B.1.1.70.000001
ORF1ab/nsp3646R646WCggTgg11B.1.1.700.000341
ORF1ab/nsp3646R646WCggTgg11B.1.1470.000756
ORF1ab/nsp3646R646delCGG---11B.1.1570.002985
ORF1ab/nsp3646R646QcGgcAg11B.1.1600.000031
ORF1ab/nsp3646R646RcgGcgT11B.1.1600.000031
ORF1ab/nsp3646R646delCGG---11B.1.160.70.002079
ORF1ab/nsp3646R646LcGgcTg11B.1.1660.008475
ORF1ab/nsp3646R646RcgGcgT11B.1.1700.00431
ORF1ab/nsp3646R646WCggTgg11B.1.177.170.000821
ORF1ab/nsp3646R646WCggTgg11B.1.177.210.000076
ORF1ab/nsp3646R646WCggTgg11B.1.177.410.0025
ORF1ab/nsp3646R646QcGgcAg11B.1.177.530.002392
ORF1ab/nsp3646R646WCggTgg11B.1.177.540.000606
ORF1ab/nsp3646R646delCGG---11B.1.177.540.000606
ORF1ab/nsp3646R646LcGgcTg11B.1.177.570.000281
ORF1ab/nsp3646R646delCGG---11B.1.177.630.002703
ORF1ab/nsp3646R646delCGG---11B.1.177.690.001484
ORF1ab/nsp3646R646WCggTgg11B.1.177.730.000566
ORF1ab/nsp3646R646RcgGcgA11B.1.177.730.000566
ORF1ab/nsp3646R646delCGG---11B.1.177.810.000189
ORF1ab/nsp3646R646WCggTgg11B.1.177.860.000183
ORF1ab/nsp3646R646LcGgcTg11B.1.20.000009
ORF1ab/nsp3646R646PcGgcCg11B.1.20.000009
ORF1ab/nsp3646R646RcgGcgT11B.1.2100.002132
ORF1ab/nsp3646R646WCggTgg11B.1.220.001318
ORF1ab/nsp3646R646SCGgTCg11B.1.2210.000071
ORF1ab/nsp3646R646CCgGTgT11B.1.2210.000071
ORF1ab/nsp3646R646FCGGTTT11B.1.2210.000071
ORF1ab/nsp3646R646PcGgcCg11B.1.2210.000071
ORF1ab/nsp3646R646XCgGTgA11B.1.2210.000071
ORF1ab/nsp3646R646QcGgcAg11B.1.2210.000071
ORF1ab/nsp3646R646WCggTgg11B.1.2350.002519
ORF1ab/nsp3646R646WCggTgg11B.1.2390.001221
ORF1ab/nsp3646R646WCggTgg11B.1.258.110.000396
ORF1ab/nsp3646R646RcgGcgT11B.1.258.170.000104
ORF1ab/nsp3646R646WCggTgg11B.1.30.002618
ORF1ab/nsp3646R646LcGgcTg11B.1.3060.005714
ORF1ab/nsp3646R646WCggTgg11B.1.3110.000275
ORF1ab/nsp3646R646delCGG---11B.1.3190.003049
ORF1ab/nsp3646R646WCggTgg11B.1.3380.008621
ORF1ab/nsp3646R646delCGG---11B.1.3400.004292
ORF1ab/nsp3646R646WCggTgg11B.1.3490.000715
ORF1ab/nsp3646R646RcgGcgT11B.1.3510.00003
ORF1ab/nsp3646R646RcgGcgA11B.1.351.50.0006
ORF1ab/nsp3646R646QcGgcAg11B.1.360.000146
ORF1ab/nsp3646R646delCGG---11B.1.360.000146
ORF1ab/nsp3646R646RcgGcgC11B.1.36.240.006173
ORF1ab/nsp3646R646WCggTgg11B.1.36.290.000517
ORF1ab/nsp3646R646QcGgcAg11B.1.36.290.000517
ORF1ab/nsp3646R646WCggTgg11B.1.36.390.002217
ORF1ab/nsp3646R646QcGgcAg11B.1.3690.000285
ORF1ab/nsp3646R646RcgGcgA11B.1.3690.000285
ORF1ab/nsp3646R646WCggTgg11B.1.3690.000285
ORF1ab/nsp3646R646RcgGcgT11B.1.3750.00082
ORF1ab/nsp3646R646RCggAgg11B.1.3960.000706
ORF1ab/nsp3646R646RcgGcgT11B.1.4160.001269
ORF1ab/nsp3646R646LcGgcTg11B.1.4270.00005
ORF1ab/nsp3646R646RcgGcgA11B.1.4290.000024
ORF1ab/nsp3646R646delCGG---11B.1.4340.052632
ORF1ab/nsp3646R646WCggTgg11B.1.4530.003236
ORF1ab/nsp3646R646RCggAgg11B.1.4700.001404
ORF1ab/nsp3646R646WCggTgg11B.1.4740.001901
ORF1ab/nsp3646R646WCggTgg11B.1.4990.00105
ORF1ab/nsp3646R646RcgGcgT11B.1.5030.002488
ORF1ab/nsp3646R646WCggTgg11B.1.5090.000866
ORF1ab/nsp3646R646LcGgcTg11B.1.5250.000113
ORF1ab/nsp3646R646WCggTgg11B.1.5610.000397
ORF1ab/nsp3646R646WCggTgg11B.1.5650.00081
ORF1ab/nsp3646R646QcGgcAg11B.1.5690.014493
ORF1ab/nsp3646R646WCggTgg11B.1.5760.000907
ORF1ab/nsp3646R646QcGgcAg11B.1.5800.004065
ORF1ab/nsp3646R646WCggTgg11B.1.5820.000491
ORF1ab/nsp3646R646QcGgcAg11B.1.5950.000261
ORF1ab/nsp3646R646RcgGcgA11B.1.5950.000261
ORF1ab/nsp3646R646del1cgGcg-11B.1.5950.000261
ORF1ab/nsp3646R646WCggTgg11B.1.5950.000261
ORF1ab/nsp3646R646RcgGcgT11B.1.5960.000087
ORF1ab/nsp3646R646WCggTgg11B.1.617.10.000129
ORF1ab/nsp3646R646GCggGgg11B.1.617.20.000004
ORF1ab/nsp3646R646delCGG---11B.1.6210.000089
ORF1ab/nsp3646R646RCggAgg11B.1.6230.000536
ORF1ab/nsp3646R646delCGG---11B.150.017544
ORF1ab/nsp3646R646RcgGcgT11B.4.50.011905
ORF1ab/nsp3646R646WCggTgg11B.4.50.011905
ORF1ab/nsp3646R646WCggTgg11C.140.004329
ORF1ab/nsp3646R646WCggTgg11C.370.000116
ORF1ab/nsp3646R646WCggTgg11C.37.10.002618
ORF1ab/nsp3646R646QcGgcAg11D.20.000075
ORF1ab/nsp3646R646WCggTgg11P.1.10.000318
ORF1ab/nsp3646R646del1cgGcg-11P.1.10.000318
ORF1ab/nsp3646R646GCggGgg11P.1.140.000048
ORF1ab/nsp3646R646LcGgcTg11P.1.140.000048
ORF1ab/nsp3646R646WCggTgg11P.1.160.000374
ORF1ab/nsp3646R646WCggTgg11P.1.170.000162
ORF1ab/nsp3646R646WCggTgg11P.1.40.000977
ORF1ab/nsp3646R646WCggTgg11P.1.70.000319
ORF1ab/nsp3646R646WCggTgg11P.1.80.004785
ORF1ab/nsp3646R646delCGG---11Q.20.000613
ORF1ab/nsp3646R646QcGgcAg11Q.30.000145
ORF1ab/nsp3646R646WCggTgg11Q.40.000455
ORF1ab/nsp3646R646WCggTgg11R.10.00009
ORF1ab/nsp3646R646RcgGcgT11R.10.00009
ORF1ab/nsp3646R646WCggTgg11W.40.001351