CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 641 & Codon = ttA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3641L641LL1459LsynttGttA11135350.4806834640-4642

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3641L641LttGttA5351113All0.000102
ORF1ab/nsp3641L641LttGttA124124B.1.20.001092
ORF1ab/nsp3641L641LttGttA5171B.1.1.70.000046
ORF1ab/nsp3641L641LttGttA2158AY.440.000128
ORF1ab/nsp3641L641LttGttA4243B.1.1770.000553
ORF1ab/nsp3641L641LttGttA635B.1.1600.000187
ORF1ab/nsp3641L641LttGttA2126B.1.10.000381
ORF1ab/nsp3641L641LttGttA2525AY.30.000249
ORF1ab/nsp3641L641LttGttA1325AY.40.00002
ORF1ab/nsp3641L641LttGttA2525B.1.1.3550.384615
ORF1ab/nsp3641L641LttGttA2020B.1.2580.001331
ORF1ab/nsp3641L641LttGttA1819B.1.617.20.000068
ORF1ab/nsp3641L641LttGttA1717AY.1200.000632
ORF1ab/nsp3641L641LttGttA614B.10.000055
ORF1ab/nsp3641L641LttGttA1212B.1.5311
ORF1ab/nsp3641L641LttGttA1010B.1.1.5190.000397
ORF1ab/nsp3641L641LttGttA99AM.11
ORF1ab/nsp3641L641LttGttA99AY.750.000504
ORF1ab/nsp3641L641LttGttA99P.10.000142
ORF1ab/nsp3641L641LttGttA77AY.1000.000322
ORF1ab/nsp3641L641LttGttA77AY.1010.003433
ORF1ab/nsp3641L641LttGttA77AY.1030.000043
ORF1ab/nsp3641L641LttGttA77AY.740.00081
ORF1ab/nsp3641L641LttGttA66AY.3.10.000512
ORF1ab/nsp3641L641LttGttA34AY.430.000013
ORF1ab/nsp3641L641LttGttA44B.1.2760.067797
ORF1ab/nsp3641L641LttGttA33AY.1020.00008
ORF1ab/nsp3641L641LttGttA23B.1.1.250.001137
ORF1ab/nsp3641L641LttGttA33B.1.1.280.000934
ORF1ab/nsp3641L641LttGttA33P.1.70.000958
ORF1ab/nsp3641L641LttGttA12AY.250.000006
ORF1ab/nsp3641L641LttGttA22AY.9.20.000073
ORF1ab/nsp3641L641LttGttA22B.1.1.3680.006173
ORF1ab/nsp3641L641LttGttA22B.1.1.570.022989
ORF1ab/nsp3641L641LttGttA12B.1.110.30.000718
ORF1ab/nsp3641L641LttGttA22B.1.177.810.000379
ORF1ab/nsp3641L641LttGttA12B.1.3510.00003
ORF1ab/nsp3641L641LttGttA22B.1.5260.000047
ORF1ab/nsp3641L641LttGttA22B.1.5960.000174
ORF1ab/nsp3641L641LttGttA22B.1.9.50.011364
ORF1ab/nsp3641L641LttGttA11A0.000387
ORF1ab/nsp3641L641LttGttA11A.10.000282
ORF1ab/nsp3641L641LttGttA11AY.1140.000231
ORF1ab/nsp3641L641LttGttA11AY.1170.000085
ORF1ab/nsp3641L641LttGttA11AY.200.000039
ORF1ab/nsp3641L641LttGttA11AY.240.000431
ORF1ab/nsp3641L641LttGttA11AY.260.000028
ORF1ab/nsp3641L641LttGttA11AY.380.000499
ORF1ab/nsp3641L641LttGttA11AY.39.10.00004
ORF1ab/nsp3641L641LttGttA11AY.410.000294
ORF1ab/nsp3641L641LttGttA11AY.450.000122
ORF1ab/nsp3641L641LttGttA11AY.470.000031
ORF1ab/nsp3641L641LttGttA11AY.50.000021
ORF1ab/nsp3641L641LttGttA11AY.540.000095
ORF1ab/nsp3641L641LttGttA11AY.550.000917
ORF1ab/nsp3641L641LttGttA11AY.60.000041
ORF1ab/nsp3641L641LttGttA11B.1.1.2980.000862
ORF1ab/nsp3641L641LttGttA11B.1.1.4090.002833
ORF1ab/nsp3641L641LttGttA11B.1.258.230.02381
ORF1ab/nsp3641L641LttGttA11B.1.3110.000275
ORF1ab/nsp3641L641LttGttA11B.1.3460.001311
ORF1ab/nsp3641L641LttGttA11B.1.351.50.0006
ORF1ab/nsp3641L641LttGttA11B.1.4220.000812
ORF1ab/nsp3641L641LttGttA11B.1.4590.004082
ORF1ab/nsp3641L641LttGttA11B.1.5740.002151
ORF1ab/nsp3641L641LttGttA11B.1.6210.000089
ORF1ab/nsp3641L641LttGttA11P.20.000187
ORF1ab/nsp3641L641LttGttA11R.10.00009