CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 64

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp364T64TT882TsynacTacG27458272690.9931172909-2911
ORF1ab/nsp364T64TT882TsynacTacC274581480.005390052909-2911
ORF1ab/nsp364T64TT882TsynacTacA27458410.001493192909-2911
ORF1ab/nsp364T64IT882InonsynaCtaTt592159200.9998312909-2911
ORF1ab/nsp364T64IT882InonsynaCTaTC592110.000168892909-2911
ORF1ab/nsp364T64NT882NnonsynaCtaAt74710.9594592909-2911
ORF1ab/nsp364T64NT882NnonsynaCTaAC7430.04054052909-2911
ORF1ab/nsp364T64delT882deldelACT---525212909-2911
ORF1ab/nsp364T64AT882AnonsynActGct52460.8846152909-2911
ORF1ab/nsp364T64AT882AnonsynAcTGcA5230.05769232909-2911
ORF1ab/nsp364T64AT882AnonsynAcTGcG5230.05769232909-2911
ORF1ab/nsp364T64ST882SnonsynActTct30120.42909-2911
ORF1ab/nsp364T64ST882SnonsynaCtaGt3070.2333332909-2911
ORF1ab/nsp364T64ST882SnonsynAcTTcG3060.22909-2911
ORF1ab/nsp364T64ST882SnonsynAcTTcA3050.1666672909-2911
ORF1ab/nsp364T64MT882MnonsynaCTaTG222212909-2911
ORF1ab/nsp364T64PT882PnonsynActCct1390.6923082909-2911
ORF1ab/nsp364T64PT882PnonsynAcTCcG1320.1538462909-2911
ORF1ab/nsp364T64PT882PnonsynAcTCcA1320.1538462909-2911
ORF1ab/nsp364T64del1T882del1delacTac-980.8888892909-2911
ORF1ab/nsp364T64del1T882del1delAcTGc-910.1111112909-2911
ORF1ab/nsp364T64LT882LnonsynACtCTt860.752909-2911
ORF1ab/nsp364T64LT882LnonsynACTTTG820.252909-2911
ORF1ab/nsp364T64ET882EnonsynACTGAG420.52909-2911
ORF1ab/nsp364T64QT882QnonsynACTCAA420.52909-2911
ORF1ab/nsp364T64QT882QnonsynACTCAG420.52909-2911
ORF1ab/nsp364T64ET882EnonsynACTGAA420.52909-2911
ORF1ab/nsp364T64WT882WnonsynACTTGG3312909-2911
ORF1ab/nsp364T64VT882VnonsynACtGTt2212909-2911
ORF1ab/nsp364T64del2T882del2delaCTa--210.52909-2911
ORF1ab/nsp364T64del2T882del2delACt--t210.52909-2911
ORF1ab/nsp364T64FT882FnonsynACTTTC1112909-2911

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp364T64TacTacG2726927458All0.005216
ORF1ab/nsp364T64TacTacC14827458All0.000028
ORF1ab/nsp364T64TacTacA4127458All0.000008
ORF1ab/nsp364T64TacTacG2675126769AY.260.757325
ORF1ab/nsp364T64TacTacA1626769AY.260.000453
ORF1ab/nsp364T64TacTacC226769AY.260.000057
ORF1ab/nsp364T64IaCtaTt59205921All0.001132
ORF1ab/nsp364T64IaCTaTC15921All0
ORF1ab/nsp364T64IaCtaTt12851285B.1.1.70.00115
ORF1ab/nsp364T64IaCtaTt422422AY.40.000657
ORF1ab/nsp364T64IaCtaTt418418B.1.617.20.001574
ORF1ab/nsp364T64IaCtaTt356356R.10.032043
ORF1ab/nsp364T64IaCtaTt273273B.1.4290.006423
ORF1ab/nsp364T64IaCtaTt247248AY.440.001503
ORF1ab/nsp364T64IaCTaTC1248AY.440.000006
ORF1ab/nsp364T64IaCtaTt232232AY.430.001028
ORF1ab/nsp364T64IaCtaTt224224AY.360.0332
ORF1ab/nsp364T64IaCtaTt195195B.1.3510.005797
ORF1ab/nsp364T64IaCtaTt194194AY.1030.001205
ORF1ab/nsp364T64IaCtaTt135135B.10.001237
ORF1ab/nsp364T64IaCtaTt135135B.1.20.001189
ORF1ab/nsp364T64IaCtaTt119119B.1.177.870.086608
ORF1ab/nsp364T64IaCtaTt9696AY.250.000577
ORF1ab/nsp364T64IaCtaTt9494P.10.001481
ORF1ab/nsp364T64IaCtaTt7878B.1.1770.001027
ORF1ab/nsp364T64TacTacG7176B.1.617.20.000267
ORF1ab/nsp364T64TacTacC476B.1.617.20.000015
ORF1ab/nsp364T64TacTacA176B.1.617.20.000004
ORF1ab/nsp364T64NaCtaAt7174All0.000014
ORF1ab/nsp364T64NaCTaAC374All0.000001
ORF1ab/nsp364T64IaCtaTt6262AY.610.006496
ORF1ab/nsp364T64IaCtaTt5858AY.30.000577
ORF1ab/nsp364T64IaCtaTt5757B.1.1.2840.006122
ORF1ab/nsp364T64IaCtaTt5656AY.4.20.001215
ORF1ab/nsp364T64IaCtaTt5555B.1.10.000998
ORF1ab/nsp364T64TacTacG5353AY.75.10.009556
ORF1ab/nsp364T64delACT---5252All0.00001
ORF1ab/nsp364T64AActGct4652All0.000009
ORF1ab/nsp364T64AAcTGcA352All0.000001
ORF1ab/nsp364T64AAcTGcG352All0.000001
ORF1ab/nsp364T64IaCtaTt4949B.1.1600.001528
ORF1ab/nsp364T64TacTacG4747AY.1130.006692
ORF1ab/nsp364T64TacTacG4545AY.750.002521
ORF1ab/nsp364T64IaCtaTt4343AY.340.004169
ORF1ab/nsp364T64IaCtaTt4242AY.1200.001562
ORF1ab/nsp364T64TacTacC2638B.1.1.70.000023
ORF1ab/nsp364T64TacTacG838B.1.1.70.000007
ORF1ab/nsp364T64TacTacA438B.1.1.70.000004
ORF1ab/nsp364T64TacTacC2037AY.40.000031
ORF1ab/nsp364T64TacTacG1637AY.40.000025
ORF1ab/nsp364T64TacTacA137AY.40.000002
ORF1ab/nsp364T64IaCtaTt3636B.1.5270.133333
ORF1ab/nsp364T64IaCtaTt3434AY.60.001398
ORF1ab/nsp364T64TacTacG3232AY.120.20.041131
ORF1ab/nsp364T64NaCtaAt3131B.1.1.70.000028
ORF1ab/nsp364T64SActTct1230All0.000002
ORF1ab/nsp364T64SaCtaGt730All0.000001
ORF1ab/nsp364T64SAcTTcG630All0.000001
ORF1ab/nsp364T64SAcTTcA530All0.000001
ORF1ab/nsp364T64IaCtaTt2727AY.390.000667
ORF1ab/nsp364T64IaCtaTt2727AY.50.000558
ORF1ab/nsp364T64IaCtaTt2626B.1.3770.118721
ORF1ab/nsp364T64IaCtaTt2525B.1.5260.000588
ORF1ab/nsp364T64IaCtaTt2323AY.230.001604
ORF1ab/nsp364T64MaCTaTG2222All0.000004
ORF1ab/nsp364T64IaCtaTt2121AY.1020.000557
ORF1ab/nsp364T64TacTacG1321B.10.000119
ORF1ab/nsp364T64TacTacC521B.10.000046
ORF1ab/nsp364T64TacTacA321B.10.000027
ORF1ab/nsp364T64IaCtaTt2121B.1.4710.057377
ORF1ab/nsp364T64IaCtaTt2020AY.1190.000706
ORF1ab/nsp364T64MaCTaTG2020AY.260.000566
ORF1ab/nsp364T64IaCtaTt2020AY.290.000315
ORF1ab/nsp364T64IaCtaTt1919AY.470.000591
ORF1ab/nsp364T64TacTacG1919AY.710.009026
ORF1ab/nsp364T64TacTacC1119B.1.1770.000145
ORF1ab/nsp364T64TacTacG819B.1.1770.000105
ORF1ab/nsp364T64TacTacG1418AY.430.000062
ORF1ab/nsp364T64TacTacA418AY.430.000018
ORF1ab/nsp364T64TacTacG1518AY.440.000091
ORF1ab/nsp364T64TacTacC318AY.440.000018
ORF1ab/nsp364T64IaCtaTt1818AY.99.20.001659
ORF1ab/nsp364T64TacTacG1717AY.620.007407
ORF1ab/nsp364T64TacTacG1416AY.30.000139
ORF1ab/nsp364T64TacTacC216AY.30.00002
ORF1ab/nsp364T64IaCtaTt1515AY.4.2.10.002235
ORF1ab/nsp364T64IaCtaTt1515AY.710.007126
ORF1ab/nsp364T64IaCtaTt1515B.1.1.3190.263158
ORF1ab/nsp364T64IaCtaTt1515B.1.2340.001979
ORF1ab/nsp364T64IaCtaTt1414AY.34.10.007139
ORF1ab/nsp364T64IaCtaTt1414B.1.110.30.010057
ORF1ab/nsp364T64IaCtaTt1414B.1.177.860.002568
ORF1ab/nsp364T64PActCct913All0.000002
ORF1ab/nsp364T64PAcTCcA213All0
ORF1ab/nsp364T64PAcTCcG213All0
ORF1ab/nsp364T64IaCtaTt1313AY.330.000868
ORF1ab/nsp364T64TacTacG1013AY.390.000247
ORF1ab/nsp364T64TacTacC313AY.390.000074
ORF1ab/nsp364T64TacTacG1313AY.470.000404
ORF1ab/nsp364T64IaCtaTt1313AY.98.10.00063
ORF1ab/nsp364T64IaCtaTt1313B.1.1.250.007391
ORF1ab/nsp364T64IaCtaTt1313B.1.2210.000923
ORF1ab/nsp364T64TacTacC1313B.1.258.170.001352
ORF1ab/nsp364T64IaCtaTt1212AY.420.000483
ORF1ab/nsp364T64IaCtaTt1212B.1.1.3480.009554
ORF1ab/nsp364T64AActGct1212B.1.1460.050847
ORF1ab/nsp364T64IaCtaTt1212B.1.2400.002587
ORF1ab/nsp364T64IaCtaTt1212B.1.5960.001046
ORF1ab/nsp364T64IaCtaTt1212B.1.6210.001062
ORF1ab/nsp364T64IaCtaTt1111B.1.177.810.002083
ORF1ab/nsp364T64IaCtaTt1111B.1.2430.000765
ORF1ab/nsp364T64IaCtaTt1111B.1.258.170.001144
ORF1ab/nsp364T64del1acTac-89All0.000002
ORF1ab/nsp364T64del1AcTGc-19All0
ORF1ab/nsp364T64IaCtaTt99AY.46.40.001481
ORF1ab/nsp364T64SActTct49AY.850.001709
ORF1ab/nsp364T64SAcTTcG39AY.850.001282
ORF1ab/nsp364T64SAcTTcA29AY.850.000854
ORF1ab/nsp364T64IaCtaTt99B.1.1.5190.000357
ORF1ab/nsp364T64IaCtaTt99B.1.2580.000599
ORF1ab/nsp364T64IaCtaTt99B.1.4270.000454
ORF1ab/nsp364T64LACtCTt68All0.000001
ORF1ab/nsp364T64LACTTTG28All0
ORF1ab/nsp364T64TacTacG88AY.1170.000676
ORF1ab/nsp364T64TacTacG48AY.250.000024
ORF1ab/nsp364T64TacTacC48AY.250.000024
ORF1ab/nsp364T64IaCtaTt88AY.75.10.001442
ORF1ab/nsp364T64TacTacC58B.1.10.000091
ORF1ab/nsp364T64TacTacG28B.1.10.000036
ORF1ab/nsp364T64TacTacA18B.1.10.000018
ORF1ab/nsp364T64IaCtaTt88B.1.1.1890.012103
ORF1ab/nsp364T64delACT---88B.1.1.70.000007
ORF1ab/nsp364T64TacTacC58B.1.20.000044
ORF1ab/nsp364T64TacTacG28B.1.20.000018
ORF1ab/nsp364T64TacTacA18B.1.20.000009
ORF1ab/nsp364T64IaCtaTt88B.1.6280.002819
ORF1ab/nsp364T64TacTacG67AY.1030.000037
ORF1ab/nsp364T64TacTacC17AY.1030.000006
ORF1ab/nsp364T64AActGct77AY.40.000011
ORF1ab/nsp364T64TacTacG77AY.930.001912
ORF1ab/nsp364T64TacTacC77B.1.1.280.002179
ORF1ab/nsp364T64TacTacG77B.1.177.540.004245
ORF1ab/nsp364T64TacTacA77B.1.2340.000924
ORF1ab/nsp364T64IaCtaTt77P.20.001306
ORF1ab/nsp364T64IaCtaTt66AY.1110.001099
ORF1ab/nsp364T64NaCtaAt56AY.440.00003
ORF1ab/nsp364T64NaCTaAC16AY.440.000006
ORF1ab/nsp364T64IaCtaTt66AY.450.00073
ORF1ab/nsp364T64TacTacG66AY.520.004886
ORF1ab/nsp364T64TacTacG66AY.540.000572
ORF1ab/nsp364T64IaCtaTt66B.1.1.280.001867
ORF1ab/nsp364T64IaCtaTt66B.1.1470.004535
ORF1ab/nsp364T64IaCtaTt66B.1.3800.039735
ORF1ab/nsp364T64TacTacC66B.1.5250.000679
ORF1ab/nsp364T64TacTacC35AY.1020.00008
ORF1ab/nsp364T64TacTacG25AY.1020.000053
ORF1ab/nsp364T64IaCtaTt55AY.200.000194
ORF1ab/nsp364T64AActGct55AY.30.00005
ORF1ab/nsp364T64TacTacG55AY.920.001436
ORF1ab/nsp364T64IaCtaTt55B.1.1.1530.005476
ORF1ab/nsp364T64IaCtaTt55B.1.1.370.000964
ORF1ab/nsp364T64SaCtaGt45B.1.1.70.000004
ORF1ab/nsp364T64SAcTTcA15B.1.1.70.000001
ORF1ab/nsp364T64IaCtaTt55B.1.177.440.002595
ORF1ab/nsp364T64IaCtaTt55B.1.3490.003574
ORF1ab/nsp364T64IaCtaTt55B.1.617.10.000645
ORF1ab/nsp364T64NaCtaAt55B.1.617.20.000019
ORF1ab/nsp364T64IaCtaTt55B.1.6370.000365
ORF1ab/nsp364T64IaCtaTt55C.370.00058
ORF1ab/nsp364T64IaCtaTt55P.1.140.000239
ORF1ab/nsp364T64IaCtaTt55P.1.150.001162
ORF1ab/nsp364T64delACT---440.222222
ORF1ab/nsp364T64AAcTGcG240.111111
ORF1ab/nsp364T64AAcTGcA240.111111
ORF1ab/nsp364T64EACTGAG240.111111
ORF1ab/nsp364T64EACTGAA240.111111
ORF1ab/nsp364T64PAcTCcG240.111111
ORF1ab/nsp364T64PAcTCcA240.111111
ORF1ab/nsp364T64QACTCAG240.111111
ORF1ab/nsp364T64QACTCAA240.111111
ORF1ab/nsp364T64QACTCAA24All0
ORF1ab/nsp364T64QACTCAG24All0
ORF1ab/nsp364T64EACTGAA24All0
ORF1ab/nsp364T64EACTGAG24All0
ORF1ab/nsp364T64IaCtaTt44AY.100.00212
ORF1ab/nsp364T64IaCtaTt44AY.1130.00057
ORF1ab/nsp364T64IaCtaTt44AY.120.001264
ORF1ab/nsp364T64IaCtaTt44AY.16.10.00188
ORF1ab/nsp364T64NaCtaAt44AY.250.000024
ORF1ab/nsp364T64IaCtaTt44AY.39.10.000158
ORF1ab/nsp364T64NaCtaAt44AY.40.000006
ORF1ab/nsp364T64delACT---44AY.430.000018
ORF1ab/nsp364T64TacTacG44AY.46.20.002541
ORF1ab/nsp364T64TacTacG44AY.610.000419
ORF1ab/nsp364T64IaCtaTt44AY.9.20.000147
ORF1ab/nsp364T64TacTacC24AY.9.20.000073
ORF1ab/nsp364T64TacTacG24AY.9.20.000073
ORF1ab/nsp364T64TacTacC44AY.98.10.000194
ORF1ab/nsp364T64TacTacG44B0.000511
ORF1ab/nsp364T64IaCtaTt44B.1.1.2220.000816
ORF1ab/nsp364T64IaCtaTt44B.1.1.3970.009009
ORF1ab/nsp364T64IaCtaTt44B.1.1.4340.001394
ORF1ab/nsp364T64IaCtaTt44B.1.258.30.0067
ORF1ab/nsp364T64IaCtaTt44B.1.3050.008602
ORF1ab/nsp364T64IaCtaTt44B.1.360.000584
ORF1ab/nsp364T64IaCtaTt44B.1.4160.005076
ORF1ab/nsp364T64IaCtaTt44B.1.6090.001918
ORF1ab/nsp364T64WACTTGG33All0.000001
ORF1ab/nsp364T64IaCtaTt33AU.10.003797
ORF1ab/nsp364T64TacTacG33AY.100.00159
ORF1ab/nsp364T64IaCtaTt33AY.1000.000138
ORF1ab/nsp364T64IaCtaTt33AY.1010.001471
ORF1ab/nsp364T64IaCtaTt33AY.1080.003308
ORF1ab/nsp364T64IaCtaTt33AY.1170.000254
ORF1ab/nsp364T64IaCtaTt33AY.1180.000188
ORF1ab/nsp364T64TacTacG23AY.1200.000074
ORF1ab/nsp364T64TacTacC13AY.1200.000037
ORF1ab/nsp364T64TacTacG33AY.130.000483
ORF1ab/nsp364T64IaCtaTt33AY.140.000264
ORF1ab/nsp364T64IaCtaTt33AY.3.10.000256
ORF1ab/nsp364T64TacTacG23AY.39.10.000079
ORF1ab/nsp364T64TacTacC13AY.39.10.00004
ORF1ab/nsp364T64IaCtaTt33AY.4.40.001227
ORF1ab/nsp364T64IaCtaTt33AY.410.000882
ORF1ab/nsp364T64AActGct33AY.440.000018
ORF1ab/nsp364T64TacTacG33AY.450.000365
ORF1ab/nsp364T64IaCtaTt33AY.460.000312
ORF1ab/nsp364T64IaCtaTt33AY.46.20.001906
ORF1ab/nsp364T64IaCtaTt33AY.750.000168
ORF1ab/nsp364T64IaCtaTt33AY.880.002653
ORF1ab/nsp364T64IaCtaTt33AY.90.000203
ORF1ab/nsp364T64TacTacG33AY.980.000237
ORF1ab/nsp364T64IaCtaTt33B0.000383
ORF1ab/nsp364T64delACT---33B.10.000027
ORF1ab/nsp364T64delACT---33B.1.1.330.001263
ORF1ab/nsp364T64IaCtaTt33B.1.177.210.000229
ORF1ab/nsp364T64IaCtaTt33B.1.177.570.000843
ORF1ab/nsp364T64PActCct33B.1.3510.000089
ORF1ab/nsp364T64IaCtaTt33B.1.36.10.003421
ORF1ab/nsp364T64IaCtaTt33B.1.3810.023438
ORF1ab/nsp364T64IaCtaTt33B.1.4990.003151
ORF1ab/nsp364T64NaCtaAt33B.1.617.10.000387
ORF1ab/nsp364T64NaCtaAt33B.4.80.214286
ORF1ab/nsp364T64IaCtaTt33D.20.000225
ORF1ab/nsp364T64TacTacA13P.10.000016
ORF1ab/nsp364T64TacTacG13P.10.000016
ORF1ab/nsp364T64TacTacC13P.10.000016
ORF1ab/nsp364T64IaCtaTt33Q.80.000495
ORF1ab/nsp364T64del1acTac-220.111111
ORF1ab/nsp364T64TacTacC22A.2.50.000998
ORF1ab/nsp364T64IaCtaTt22A.2.5.20.003145
ORF1ab/nsp364T64IaCtaTt22AD.20.000438
ORF1ab/nsp364T64VACtGTt22All0
ORF1ab/nsp364T64del2aCTa--12All0
ORF1ab/nsp364T64del2ACt--t12All0
ORF1ab/nsp364T64TacTacG22AY.1000.000092
ORF1ab/nsp364T64AActGct22AY.1140.000462
ORF1ab/nsp364T64TacTacG22AY.1190.000071
ORF1ab/nsp364T64TacTacC22AY.120.10.000642
ORF1ab/nsp364T64IaCtaTt22AY.120.20.002571
ORF1ab/nsp364T64IaCtaTt22AY.270.000129
ORF1ab/nsp364T64LACtCTt22AY.30.00002
ORF1ab/nsp364T64delACT---22AY.30.00002
ORF1ab/nsp364T64TacTacA12AY.300.000396
ORF1ab/nsp364T64TacTacG12AY.300.000396
ORF1ab/nsp364T64IaCtaTt22AY.380.000999
ORF1ab/nsp364T64SAcTTcG12AY.39.10.00004
ORF1ab/nsp364T64SActTct12AY.39.10.00004
ORF1ab/nsp364T64IaCtaTt22AY.39.1.10.001449
ORF1ab/nsp364T64SActTct22AY.40.000003
ORF1ab/nsp364T64TacTacC12AY.460.000104
ORF1ab/nsp364T64TacTacG12AY.460.000104
ORF1ab/nsp364T64IaCtaTt22AY.46.50.000397
ORF1ab/nsp364T64TacTacG12AY.46.60.000072
ORF1ab/nsp364T64TacTacC12AY.46.60.000072
ORF1ab/nsp364T64SAcTTcA12AY.470.000031
ORF1ab/nsp364T64SAcTTcG12AY.470.000031
ORF1ab/nsp364T64IaCtaTt22AY.5.30.000675
ORF1ab/nsp364T64TacTacG22AY.670.000929
ORF1ab/nsp364T64IaCtaTt22AY.700.000417
ORF1ab/nsp364T64TacTacG22AY.700.000417
ORF1ab/nsp364T64IaCtaTt22AY.810.003984
ORF1ab/nsp364T64IaCtaTt22AY.850.000854
ORF1ab/nsp364T64AActGct12AY.850.000427
ORF1ab/nsp364T64AAcTGcG12AY.850.000427
ORF1ab/nsp364T64IaCtaTt22AY.920.000575
ORF1ab/nsp364T64IaCtaTt22AY.980.000158
ORF1ab/nsp364T64del1acTac-22B.10.000018
ORF1ab/nsp364T64NaCtaAt22B.10.000018
ORF1ab/nsp364T64delACT---22B.1.10.000036
ORF1ab/nsp364T64IaCtaTt22B.1.1.10.000653
ORF1ab/nsp364T64IaCtaTt22B.1.1.2140.000111
ORF1ab/nsp364T64IaCtaTt22B.1.1.2160.001781
ORF1ab/nsp364T64IaCtaTt22B.1.1.2310.006192
ORF1ab/nsp364T64IaCtaTt22B.1.1.2430.008163
ORF1ab/nsp364T64IaCtaTt22B.1.1.2800.006173
ORF1ab/nsp364T64IaCtaTt22B.1.1.3060.000877
ORF1ab/nsp364T64IaCtaTt22B.1.1.3180.000604
ORF1ab/nsp364T64IaCtaTt22B.1.1.3390.021053
ORF1ab/nsp364T64delACT---22B.1.1.3480.001592
ORF1ab/nsp364T64NaCtaAt22B.1.1.3480.001592
ORF1ab/nsp364T64IaCtaTt22B.1.1.3700.025316
ORF1ab/nsp364T64AActGct22B.1.1.70.000002
ORF1ab/nsp364T64IaCtaTt22B.1.1040.00738
ORF1ab/nsp364T64IaCtaTt22B.1.177.730.001133
ORF1ab/nsp364T64LACtCTt22B.1.20.000018
ORF1ab/nsp364T64delACT---22B.1.20.000018
ORF1ab/nsp364T64del1acTac-12B.1.20.000009
ORF1ab/nsp364T64del1AcTGc-12B.1.20.000009
ORF1ab/nsp364T64TacTacG22B.1.2210.000142
ORF1ab/nsp364T64IaCtaTt22B.1.2360.004107
ORF1ab/nsp364T64IaCtaTt22B.1.36.280.011494
ORF1ab/nsp364T64IaCtaTt22B.1.3620.003082
ORF1ab/nsp364T64IaCtaTt22B.1.4000.000858
ORF1ab/nsp364T64NaCtaAt22B.1.4290.000047
ORF1ab/nsp364T64IaCtaTt22B.1.4330.00639
ORF1ab/nsp364T64IaCtaTt22B.1.4590.008163
ORF1ab/nsp364T64IaCtaTt22B.1.4630.016129
ORF1ab/nsp364T64IaCtaTt22B.1.4680.011429
ORF1ab/nsp364T64IaCtaTt22B.1.5240.002813
ORF1ab/nsp364T64IaCtaTt22B.1.5610.000794
ORF1ab/nsp364T64delACT---22B.1.617.20.000008
ORF1ab/nsp364T64IaCtaTt22B.4.10.037736
ORF1ab/nsp364T64IaCtaTt22C.160.002121
ORF1ab/nsp364T64IaCtaTt22C.360.001821
ORF1ab/nsp364T64IaCtaTt22N.50.003534
ORF1ab/nsp364T64delACT---22N.60.014184
ORF1ab/nsp364T64delACT---22P.10.000032
ORF1ab/nsp364T64AActGct22P.10.000032
ORF1ab/nsp364T64IaCtaTt22P.1.10.000635
ORF1ab/nsp364T64IaCtaTt22P.1.70.000639
ORF1ab/nsp364T64FACTTTC11All0
ORF1ab/nsp364T64TacTacC11AY.10.000396
ORF1ab/nsp364T64delACT---11AY.1000.000046
ORF1ab/nsp364T64del2ACt--t11AY.1030.000006
ORF1ab/nsp364T64NaCtaAt11AY.1030.000006
ORF1ab/nsp364T64AActGct11AY.1030.000006
ORF1ab/nsp364T64IaCtaTt11AY.1050.000643
ORF1ab/nsp364T64IaCtaTt11AY.1060.000335
ORF1ab/nsp364T64TacTacG11AY.1080.001103
ORF1ab/nsp364T64TacTacG11AY.1100.000113
ORF1ab/nsp364T64MaCTaTG11AY.1130.000142
ORF1ab/nsp364T64TacTacG11AY.116.10.000311
ORF1ab/nsp364T64TacTacG11AY.1180.000063
ORF1ab/nsp364T64NaCtaAt11AY.1180.000063
ORF1ab/nsp364T64SActTct11AY.1190.000035
ORF1ab/nsp364T64IaCtaTt11AY.120.10.000321
ORF1ab/nsp364T64IaCtaTt11AY.120.2.10.000498
ORF1ab/nsp364T64IaCtaTt11AY.130.000161
ORF1ab/nsp364T64IaCtaTt11AY.20.000356
ORF1ab/nsp364T64TacTacG11AY.200.000039
ORF1ab/nsp364T64AActGct11AY.230.00007
ORF1ab/nsp364T64TacTacG11AY.230.00007
ORF1ab/nsp364T64TacTacG11AY.23.10.000417
ORF1ab/nsp364T64LACtCTt11AY.250.000006
ORF1ab/nsp364T64delACT---11AY.250.000006
ORF1ab/nsp364T64VACtGTt11AY.260.000028
ORF1ab/nsp364T64delACT---11AY.260.000028
ORF1ab/nsp364T64IaCtaTt11AY.29.10.000221
ORF1ab/nsp364T64WACTTGG11AY.30.00001
ORF1ab/nsp364T64SaCtaGt11AY.30.00001
ORF1ab/nsp364T64TacTacC11AY.3.10.000085
ORF1ab/nsp364T64IaCtaTt11AY.300.000396
ORF1ab/nsp364T64TacTacG11AY.330.000067
ORF1ab/nsp364T64SActTct11AY.390.000025
ORF1ab/nsp364T64PActCct11AY.390.000025
ORF1ab/nsp364T64delACT---11AY.390.000025
ORF1ab/nsp364T64NaCtaAt11AY.39.10.00004
ORF1ab/nsp364T64MaCTaTG11AY.39.10.00004
ORF1ab/nsp364T64AActGct11AY.4.20.000022
ORF1ab/nsp364T64TacTacC11AY.4.20.000022
ORF1ab/nsp364T64IaCtaTt11AY.4.50.000107
ORF1ab/nsp364T64TacTacG11AY.400.000964
ORF1ab/nsp364T64TacTacG11AY.420.00004
ORF1ab/nsp364T64NaCtaAt11AY.430.000004
ORF1ab/nsp364T64WACTTGG11AY.430.000004
ORF1ab/nsp364T64AActGct11AY.430.000004
ORF1ab/nsp364T64del1acTac-11AY.440.000006
ORF1ab/nsp364T64delACT---11AY.460.000104
ORF1ab/nsp364T64AActGct11AY.460.000104
ORF1ab/nsp364T64PActCct11AY.460.000104
ORF1ab/nsp364T64IaCtaTt11AY.46.10.001027
ORF1ab/nsp364T64NaCtaAt11AY.46.40.000165
ORF1ab/nsp364T64IaCtaTt11AY.46.60.000072
ORF1ab/nsp364T64TacTacC11AY.50.000021
ORF1ab/nsp364T64IaCtaTt11AY.590.00053
ORF1ab/nsp364T64delACT---11AY.610.000105
ORF1ab/nsp364T64SAcTTcG11AY.620.000436
ORF1ab/nsp364T64IaCtaTt11AY.630.000387
ORF1ab/nsp364T64TacTacG11AY.640.000595
ORF1ab/nsp364T64IaCtaTt11AY.670.000464
ORF1ab/nsp364T64LACtCTt11AY.670.000464
ORF1ab/nsp364T64WACTTGG11AY.670.000464
ORF1ab/nsp364T64IaCtaTt11AY.690.000187
ORF1ab/nsp364T64TacTacG11AY.7.10.000113
ORF1ab/nsp364T64TacTacG11AY.730.000665
ORF1ab/nsp364T64NaCtaAt11AY.840.000437
ORF1ab/nsp364T64FACTTTC11AY.850.000427
ORF1ab/nsp364T64TacTacG11AY.90.000068
ORF1ab/nsp364T64TacTacG11AY.9.10.000084
ORF1ab/nsp364T64IaCtaTt11AY.900.000684
ORF1ab/nsp364T64AActGct11AY.920.000287
ORF1ab/nsp364T64delACT---11AY.990.001049
ORF1ab/nsp364T64TacTacG11AY.99.20.000092
ORF1ab/nsp364T64delACT---11AZ.20.000821
ORF1ab/nsp364T64PActCct11B0.000128
ORF1ab/nsp364T64delACT---11B0.000128
ORF1ab/nsp364T64SaCtaGt11B.10.000009
ORF1ab/nsp364T64LACTTTG11B.10.000009
ORF1ab/nsp364T64AActGct11B.10.000009
ORF1ab/nsp364T64AAcTGcA11B.1.10.000018
ORF1ab/nsp364T64NaCtaAt11B.1.1.1280.007092
ORF1ab/nsp364T64IaCtaTt11B.1.1.1410.002012
ORF1ab/nsp364T64IaCtaTt11B.1.1.150.013514
ORF1ab/nsp364T64IaCtaTt11B.1.1.1760.000439
ORF1ab/nsp364T64IaCtaTt11B.1.1.2340.012048
ORF1ab/nsp364T64IaCtaTt11B.1.1.2400.004695
ORF1ab/nsp364T64IaCtaTt11B.1.1.2440.015385
ORF1ab/nsp364T64IaCtaTt11B.1.1.2980.000862
ORF1ab/nsp364T64IaCtaTt11B.1.1.3010.001179
ORF1ab/nsp364T64TacTacC11B.1.1.3060.000438
ORF1ab/nsp364T64TacTacG11B.1.1.3480.000796
ORF1ab/nsp364T64IaCtaTt11B.1.1.3890.006061
ORF1ab/nsp364T64AActGct11B.1.1.390.00051
ORF1ab/nsp364T64IaCtaTt11B.1.1.40.002976
ORF1ab/nsp364T64IaCtaTt11B.1.1.5260.003546
ORF1ab/nsp364T64IaCtaTt11B.1.1.630.000386
ORF1ab/nsp364T64LACTTTG11B.1.1.70.000001
ORF1ab/nsp364T64del1acTac-11B.1.1.70.000001
ORF1ab/nsp364T64IaCtaTt11B.1.1.700.000341
ORF1ab/nsp364T64AActGct11B.1.1.710.006061
ORF1ab/nsp364T64IaCtaTt11B.1.1110.001175
ORF1ab/nsp364T64IaCtaTt11B.1.1260.001276
ORF1ab/nsp364T64IaCtaTt11B.1.130.002375
ORF1ab/nsp364T64TacTacC11B.1.1390.000733
ORF1ab/nsp364T64IaCtaTt11B.1.1420.002899
ORF1ab/nsp364T64IaCtaTt11B.1.1430.021277
ORF1ab/nsp364T64VACtGTt11B.1.1460.004237
ORF1ab/nsp364T64TacTacC11B.1.1600.000031
ORF1ab/nsp364T64TacTacC11B.1.160.130.027778
ORF1ab/nsp364T64IaCtaTt11B.1.160.140.002119
ORF1ab/nsp364T64IaCtaTt11B.1.160.160.000929
ORF1ab/nsp364T64IaCtaTt11B.1.177.180.00116
ORF1ab/nsp364T64IaCtaTt11B.1.177.280.007407
ORF1ab/nsp364T64IaCtaTt11B.1.177.40.000211
ORF1ab/nsp364T64del1acTac-11B.1.177.440.000519
ORF1ab/nsp364T64IaCtaTt11B.1.177.470.012987
ORF1ab/nsp364T64delACT---11B.1.177.510.004566
ORF1ab/nsp364T64IaCtaTt11B.1.177.540.000606
ORF1ab/nsp364T64TacTacC11B.1.177.570.000281
ORF1ab/nsp364T64IaCtaTt11B.1.177.580.001332
ORF1ab/nsp364T64IaCtaTt11B.1.177.80.000752
ORF1ab/nsp364T64IaCtaTt11B.1.1890.004292
ORF1ab/nsp364T64IaCtaTt11B.1.1990.004132
ORF1ab/nsp364T64AActGct11B.1.20.000009
ORF1ab/nsp364T64NaCTaAC11B.1.20.000009
ORF1ab/nsp364T64IaCtaTt11B.1.2100.002132
ORF1ab/nsp364T64IaCtaTt11B.1.2220.001692
ORF1ab/nsp364T64TacTacC11B.1.2400.000216
ORF1ab/nsp364T64IaCtaTt11B.1.2790.000514
ORF1ab/nsp364T64IaCtaTt11B.1.3010.005917
ORF1ab/nsp364T64IaCtaTt11B.1.3080.034483
ORF1ab/nsp364T64IaCtaTt11B.1.3200.001245
ORF1ab/nsp364T64TacTacC11B.1.3200.001245
ORF1ab/nsp364T64IaCtaTt11B.1.3290.000608
ORF1ab/nsp364T64IaCtaTt11B.1.3360.002439
ORF1ab/nsp364T64delACT---11B.1.3490.000715
ORF1ab/nsp364T64SActTct11B.1.3510.00003
ORF1ab/nsp364T64TacTacG11B.1.3510.00003
ORF1ab/nsp364T64IaCtaTt11B.1.351.30.000876
ORF1ab/nsp364T64TacTacG11B.1.360.000146
ORF1ab/nsp364T64IaCtaTt11B.1.36.180.00042
ORF1ab/nsp364T64IaCtaTt11B.1.36.290.000517
ORF1ab/nsp364T64IaCtaTt11B.1.36.340.021277
ORF1ab/nsp364T64IaCtaTt11B.1.36.360.000602
ORF1ab/nsp364T64PActCct11B.1.36.80.001
ORF1ab/nsp364T64IaCtaTt11B.1.36.80.001
ORF1ab/nsp364T64IaCtaTt11B.1.3690.000285
ORF1ab/nsp364T64IaCtaTt11B.1.3750.00082
ORF1ab/nsp364T64IaCtaTt11B.1.3960.000706
ORF1ab/nsp364T64delACT---11B.1.4290.000024
ORF1ab/nsp364T64IaCtaTt11B.1.429.10.012048
ORF1ab/nsp364T64IaCtaTt11B.1.4560.003268
ORF1ab/nsp364T64IaCtaTt11B.1.466.20.000391
ORF1ab/nsp364T64IaCtaTt11B.1.4780.011765
ORF1ab/nsp364T64delACT---11B.1.5170.000427
ORF1ab/nsp364T64SActTct11B.1.5240.001406
ORF1ab/nsp364T64IaCtaTt11B.1.5250.000113
ORF1ab/nsp364T64IaCtaTt11B.1.5670.003333
ORF1ab/nsp364T64IaCtaTt11B.1.5680.001111
ORF1ab/nsp364T64IaCtaTt11B.1.5750.000303
ORF1ab/nsp364T64delACT---11B.1.575.10.002439
ORF1ab/nsp364T64del2aCTa--11B.1.5770.000687
ORF1ab/nsp364T64TacTacA11B.1.5960.000087
ORF1ab/nsp364T64delACT---11B.1.5960.000087
ORF1ab/nsp364T64IaCtaTt11B.1.6020.006536
ORF1ab/nsp364T64TacTacC11B.1.617.10.000129
ORF1ab/nsp364T64SActTct11B.1.617.20.000004
ORF1ab/nsp364T64IaCtaTt11B.1.619.10.000641
ORF1ab/nsp364T64TacTacG11B.1.6210.000089
ORF1ab/nsp364T64IaCtaTt11B.1.6300.005236
ORF1ab/nsp364T64NaCtaAt11B.1.6370.000073
ORF1ab/nsp364T64TacTacG11B.310.003731
ORF1ab/nsp364T64SaCtaGt11B.390.002331
ORF1ab/nsp364T64IaCtaTt11B.40.002208
ORF1ab/nsp364T64IaCtaTt11B.400.000364
ORF1ab/nsp364T64PActCct11B.60.00091
ORF1ab/nsp364T64delACT---11C.170.055556
ORF1ab/nsp364T64TacTacG11C.36.30.000567
ORF1ab/nsp364T64AActGct11C.370.000116
ORF1ab/nsp364T64PActCct11D.20.000075
ORF1ab/nsp364T64NaCtaAt11P.10.000016
ORF1ab/nsp364T64SAcTTcA11P.10.000016
ORF1ab/nsp364T64NaCTaAC11P.1.140.000048
ORF1ab/nsp364T64AActGct11P.1.150.000232
ORF1ab/nsp364T64TacTacG11P.1.170.000162
ORF1ab/nsp364T64IaCtaTt11P.1.17.10.000875
ORF1ab/nsp364T64TacTacG11P.1.70.000319
ORF1ab/nsp364T64NaCtaAt11P.20.000187
ORF1ab/nsp364T64IaCtaTt11Q.30.000145
ORF1ab/nsp364T64TacTacC11Q.80.000165