CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 616 & Codon = Att

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3616L616IL1434InonsynCttAtt16116114565-4567

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3616L616ICttAtt161161All0.000031
ORF1ab/nsp3616L616ICttAtt2222AY.1000.001012
ORF1ab/nsp3616L616ICttAtt2222B.1.1.70.00002
ORF1ab/nsp3616L616ICttAtt2121AY.440.000128
ORF1ab/nsp3616L616ICttAtt1717B.1.1.3411
ORF1ab/nsp3616L616ICttAtt1616AY.290.000252
ORF1ab/nsp3616L616ICttAtt1414B.1.1.4320.017722
ORF1ab/nsp3616L616ICttAtt1111B.1.617.20.000041
ORF1ab/nsp3616L616ICttAtt99B.1.10.000163
ORF1ab/nsp3616L616ICttAtt77AY.40.000011
ORF1ab/nsp3616L616ICttAtt55B.1.4290.000118
ORF1ab/nsp3616L616ICttAtt33AY.260.000085
ORF1ab/nsp3616L616ICttAtt22AY.470.000062
ORF1ab/nsp3616L616ICttAtt22B.1.1.2440.030769
ORF1ab/nsp3616L616ICttAtt22B.1.1780.047619
ORF1ab/nsp3616L616ICttAtt11AY.1090.00074
ORF1ab/nsp3616L616ICttAtt11AY.1170.000085
ORF1ab/nsp3616L616ICttAtt11AY.270.000065
ORF1ab/nsp3616L616ICttAtt11AY.330.000067
ORF1ab/nsp3616L616ICttAtt11AY.430.000004
ORF1ab/nsp3616L616ICttAtt11B.10.000009
ORF1ab/nsp3616L616ICttAtt11B.1.1770.000013
ORF1ab/nsp3616L616ICttAtt11P.1.60.001946