CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 597

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3597V597VV1415VsyngtGgtT736250670.6882644508-4510
ORF1ab/nsp3597V597VV1415VsyngtGgtA736222490.3054884508-4510
ORF1ab/nsp3597V597VV1415VsyngtGgtC7362460.00624834508-4510
ORF1ab/nsp3597V597MV1415MnonsynGtgAtg43543514508-4510
ORF1ab/nsp3597V597LV1415LnonsynGtgTtg1911850.9685864508-4510
ORF1ab/nsp3597V597LV1415LnonsynGtgCtg19150.0261784508-4510
ORF1ab/nsp3597V597LV1415LnonsynGtGCtC19110.00523564508-4510
ORF1ab/nsp3597V597delV1415deldelGTG---12812814508-4510
ORF1ab/nsp3597V597AV1415AnonsyngTggCg50490.984508-4510
ORF1ab/nsp3597V597AV1415AnonsyngTGgCC5010.024508-4510
ORF1ab/nsp3597V597IV1415InonsynGtGAtT19180.9473684508-4510
ORF1ab/nsp3597V597IV1415InonsynGtGAtA1910.05263164508-4510
ORF1ab/nsp3597V597del1V1415del1delgtGgt-11100.9090914508-4510
ORF1ab/nsp3597V597del1V1415del1delGtg-tg1110.09090914508-4510
ORF1ab/nsp3597V597GV1415GnonsyngTGgGT640.6666674508-4510
ORF1ab/nsp3597V597GV1415GnonsyngTggGg620.3333334508-4510
ORF1ab/nsp3597V597XV1415XnonsynGTGTGA320.6666674508-4510
ORF1ab/nsp3597V597XV1415XnonsynGTgTAg310.3333334508-4510
ORF1ab/nsp3597V597SV1415SnonsynGTGTCA2214508-4510
ORF1ab/nsp3597V597PV1415PnonsynGTGCCC210.54508-4510
ORF1ab/nsp3597V597PV1415PnonsynGTgCCg210.54508-4510
ORF1ab/nsp3597V597del2V1415del2delgTGg--210.54508-4510
ORF1ab/nsp3597V597del2V1415del2delGTg--g210.54508-4510
ORF1ab/nsp3597V597EV1415EnonsyngTggAg1114508-4510
ORF1ab/nsp3597V597QV1415QnonsynGTGCAA1114508-4510
ORF1ab/nsp3597V597DV1415DnonsyngTGgAC1114508-4510
ORF1ab/nsp3597V597KV1415KnonsynGTgAAg1114508-4510
ORF1ab/nsp3597V597TV1415TnonsynGTGACA1114508-4510

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3597V597VgtGgtT50677362All0.000969
ORF1ab/nsp3597V597VgtGgtA22497362All0.00043
ORF1ab/nsp3597V597VgtGgtC467362All0.000009
ORF1ab/nsp3597V597VgtGgtA14401440B.1.1.500.977597
ORF1ab/nsp3597V597VgtGgtT10201268B.1.1.70.000913
ORF1ab/nsp3597V597VgtGgtA2471268B.1.1.70.000221
ORF1ab/nsp3597V597VgtGgtC11268B.1.1.70.000001
ORF1ab/nsp3597V597VgtGgtT492520AY.40.000766
ORF1ab/nsp3597V597VgtGgtC23520AY.40.000036
ORF1ab/nsp3597V597VgtGgtA5520AY.40.000008
ORF1ab/nsp3597V597MGtgAtg435435All0.000083
ORF1ab/nsp3597V597VgtGgtT262269B.1.4290.006165
ORF1ab/nsp3597V597VgtGgtA6269B.1.4290.000141
ORF1ab/nsp3597V597VgtGgtC1269B.1.4290.000024
ORF1ab/nsp3597V597VgtGgtT238239B.1.3510.007075
ORF1ab/nsp3597V597VgtGgtC1239B.1.3510.00003
ORF1ab/nsp3597V597VgtGgtT189224AY.440.00115
ORF1ab/nsp3597V597VgtGgtA31224AY.440.000189
ORF1ab/nsp3597V597VgtGgtC4224AY.440.000024
ORF1ab/nsp3597V597VgtGgtA210220B.1.4270.010604
ORF1ab/nsp3597V597VgtGgtT10220B.1.4270.000505
ORF1ab/nsp3597V597LGtgTtg185191All0.000035
ORF1ab/nsp3597V597LGtgCtg5191All0.000001
ORF1ab/nsp3597V597LGtGCtC1191All0
ORF1ab/nsp3597V597VgtGgtT174177AY.430.000771
ORF1ab/nsp3597V597VgtGgtA3177AY.430.000013
ORF1ab/nsp3597V597VgtGgtT174174B.1.1.1960.994286
ORF1ab/nsp3597V597VgtGgtT167173B.1.617.20.000629
ORF1ab/nsp3597V597VgtGgtA6173B.1.617.20.000023
ORF1ab/nsp3597V597MGtgAtg153153B.1.1.70.000137
ORF1ab/nsp3597V597VgtGgtT144144B.1.1.5260.510638
ORF1ab/nsp3597V597VgtGgtT124131B.1.20.001092
ORF1ab/nsp3597V597VgtGgtA6131B.1.20.000053
ORF1ab/nsp3597V597VgtGgtC1131B.1.20.000009
ORF1ab/nsp3597V597delGTG---128128All0.000024
ORF1ab/nsp3597V597VgtGgtT95117AY.1030.00059
ORF1ab/nsp3597V597VgtGgtA21117AY.1030.00013
ORF1ab/nsp3597V597VgtGgtC1117AY.1030.000006
ORF1ab/nsp3597V597VgtGgtA112112B.1.1.2091
ORF1ab/nsp3597V597VgtGgtT9696R.10.008641
ORF1ab/nsp3597V597VgtGgtT6094B.10.00055
ORF1ab/nsp3597V597VgtGgtA3094B.10.000275
ORF1ab/nsp3597V597VgtGgtC494B.10.000037
ORF1ab/nsp3597V597VgtGgtT8990B.1.1.2910.066073
ORF1ab/nsp3597V597VgtGgtA190B.1.1.2910.000742
ORF1ab/nsp3597V597VgtGgtT7375B.1.1770.000961
ORF1ab/nsp3597V597VgtGgtC175B.1.1770.000013
ORF1ab/nsp3597V597VgtGgtA175B.1.1770.000013
ORF1ab/nsp3597V597VgtGgtT7374AY.250.000439
ORF1ab/nsp3597V597VgtGgtA174AY.250.000006
ORF1ab/nsp3597V597MGtgAtg7373AY.4.10.053835
ORF1ab/nsp3597V597LGtgTtg7272AY.540.006865
ORF1ab/nsp3597V597VgtGgtT5461P.10.000851
ORF1ab/nsp3597V597VgtGgtA761P.10.00011
ORF1ab/nsp3597V597VgtGgtT5358AY.30.000527
ORF1ab/nsp3597V597VgtGgtA458AY.30.00004
ORF1ab/nsp3597V597VgtGgtC158AY.30.00001
ORF1ab/nsp3597V597VgtGgtT5153AY.470.001586
ORF1ab/nsp3597V597VgtGgtA253AY.470.000062
ORF1ab/nsp3597V597VgtGgtT4552B.1.10.000816
ORF1ab/nsp3597V597VgtGgtA752B.1.10.000127
ORF1ab/nsp3597V597AgTggCg4950All0.000009
ORF1ab/nsp3597V597AgTGgCC150All0
ORF1ab/nsp3597V597VgtGgtA4050AY.50.000826
ORF1ab/nsp3597V597VgtGgtT1050AY.50.000206
ORF1ab/nsp3597V597VgtGgtT4850B.1.1.5190.001906
ORF1ab/nsp3597V597VgtGgtC150B.1.1.5190.00004
ORF1ab/nsp3597V597VgtGgtA150B.1.1.5190.00004
ORF1ab/nsp3597V597VgtGgtT4545B.1.438.20.865385
ORF1ab/nsp3597V597VgtGgtT4444AY.99.20.004055
ORF1ab/nsp3597V597VgtGgtT4343AY.1020.00114
ORF1ab/nsp3597V597VgtGgtT3943B.1.360.00569
ORF1ab/nsp3597V597VgtGgtC443B.1.360.000584
ORF1ab/nsp3597V597VgtGgtT3939B.1.5270.144444
ORF1ab/nsp3597V597VgtGgtT3737AY.4.50.003977
ORF1ab/nsp3597V597VgtGgtT3636AY.290.000568
ORF1ab/nsp3597V597VgtGgtT3535AY.390.000865
ORF1ab/nsp3597V597LGtgTtg3232Q.30.004641
ORF1ab/nsp3597V597MGtgAtg2828AY.40.000044
ORF1ab/nsp3597V597delGTG---2828B.1.1.70.000025
ORF1ab/nsp3597V597VgtGgtT2627AY.200.00101
ORF1ab/nsp3597V597VgtGgtA127AY.200.000039
ORF1ab/nsp3597V597MGtgAtg2323B.1.1.3160.021277
ORF1ab/nsp3597V597VgtGgtT2323B.1.221.20.092369
ORF1ab/nsp3597V597VgtGgtT2323B.1.2580.001531
ORF1ab/nsp3597V597VgtGgtT2222AY.9.20.000808
ORF1ab/nsp3597V597VgtGgtT2121B.1.1.3170.008646
ORF1ab/nsp3597V597VgtGgtT2021B.1.1600.000624
ORF1ab/nsp3597V597VgtGgtA121B.1.1600.000031
ORF1ab/nsp3597V597VgtGgtT2121P.20.003919
ORF1ab/nsp3597V597VgtGgtT1920AY.330.001269
ORF1ab/nsp3597V597VgtGgtC120AY.330.000067
ORF1ab/nsp3597V597IGtGAtT1819All0.000003
ORF1ab/nsp3597V597IGtGAtA119All0
ORF1ab/nsp3597V597VgtGgtT1919AY.16.10.008929
ORF1ab/nsp3597V597VgtGgtT1719B.1.1.3180.00513
ORF1ab/nsp3597V597VgtGgtA219B.1.1.3180.000604
ORF1ab/nsp3597V597VgtGgtT1919B.1.617.10.00245
ORF1ab/nsp3597V597VgtGgtT1818B.1.1.2560.246575
ORF1ab/nsp3597V597VgtGgtT1717AY.4.2.10.002533
ORF1ab/nsp3597V597VgtGgtT1717AY.460.001769
ORF1ab/nsp3597V597VgtGgtT1717B.1.177.830.025185
ORF1ab/nsp3597V597VgtGgtT1616AY.260.000453
ORF1ab/nsp3597V597MGtgAtg1616AY.440.000097
ORF1ab/nsp3597V597VgtGgtA1316B0.001662
ORF1ab/nsp3597V597VgtGgtT316B0.000383
ORF1ab/nsp3597V597VgtGgtT1616B.1.1.2140.000887
ORF1ab/nsp3597V597VgtGgtT1616B.1.1.5280.076923
ORF1ab/nsp3597V597VgtGgtT1616P.1.170.002588
ORF1ab/nsp3597V597MGtgAtg1515AY.9.10.001256
ORF1ab/nsp3597V597VgtGgtT1415AY.98.10.000678
ORF1ab/nsp3597V597VgtGgtA115AY.98.10.000048
ORF1ab/nsp3597V597VgtGgtT1414AY.1180.000877
ORF1ab/nsp3597V597VgtGgtA914AY.270.000582
ORF1ab/nsp3597V597VgtGgtT514AY.270.000324
ORF1ab/nsp3597V597VgtGgtT1414AY.300.00554
ORF1ab/nsp3597V597VgtGgtT1414B.1.2400.003018
ORF1ab/nsp3597V597VgtGgtT1414B.1.4780.164706
ORF1ab/nsp3597V597VgtGgtT1313B.1.5250.001471
ORF1ab/nsp3597V597VgtGgtT1212AY.480.005581
ORF1ab/nsp3597V597VgtGgtT1212AY.650.006397
ORF1ab/nsp3597V597VgtGgtT1212AY.7.10.001352
ORF1ab/nsp3597V597VgtGgtT1112B.1.1.3060.004822
ORF1ab/nsp3597V597VgtGgtA112B.1.1.3060.000438
ORF1ab/nsp3597V597VgtGgtT1212B.1.1.630.00463
ORF1ab/nsp3597V597del1gtGgt-1011All0.000002
ORF1ab/nsp3597V597del1Gtg-tg111All0
ORF1ab/nsp3597V597VgtGgtT1111AY.1190.000388
ORF1ab/nsp3597V597delGTG---1111AY.40.000017
ORF1ab/nsp3597V597VgtGgtA1111B.1.2230.030556
ORF1ab/nsp3597V597VgtGgtT1111Q.30.001595
ORF1ab/nsp3597V597VgtGgtT1010AY.230.000697
ORF1ab/nsp3597V597VgtGgtT510AY.4.20.000108
ORF1ab/nsp3597V597VgtGgtA510AY.4.20.000108
ORF1ab/nsp3597V597VgtGgtT1010AY.60.000411
ORF1ab/nsp3597V597MGtgAtg1010B.1.5260.000235
ORF1ab/nsp3597V597IGtGAtT99AY.4.10.006637
ORF1ab/nsp3597V597VgtGgtT99AY.420.000362
ORF1ab/nsp3597V597VgtGgtT99AY.610.000943
ORF1ab/nsp3597V597AgTggCg99AY.610.000943
ORF1ab/nsp3597V597VgtGgtT99B.1.466.20.003521
ORF1ab/nsp3597V597VgtGgtT99C.370.001045
ORF1ab/nsp3597V597VgtGgtT88AY.1170.000676
ORF1ab/nsp3597V597VgtGgtT88AY.1200.000297
ORF1ab/nsp3597V597MGtgAtg88AY.250.000048
ORF1ab/nsp3597V597MGtgAtg88AY.390.000198
ORF1ab/nsp3597V597LGtgTtg78B.1.1.70.000006
ORF1ab/nsp3597V597LGtgCtg18B.1.1.70.000001
ORF1ab/nsp3597V597VgtGgtT88B.1.2210.000568
ORF1ab/nsp3597V597VgtGgtT88B.1.2430.000557
ORF1ab/nsp3597V597LGtgTtg88B.1.617.20.00003
ORF1ab/nsp3597V597MGtgAtg77AY.1030.000043
ORF1ab/nsp3597V597VgtGgtT77AY.1160.002007
ORF1ab/nsp3597V597LGtgTtg77AY.46.30.006536
ORF1ab/nsp3597V597VgtGgtT77AY.90.000473
ORF1ab/nsp3597V597MGtgAtg77B.1.3780.047945
ORF1ab/nsp3597V597VgtGgtT47B.1.6210.000354
ORF1ab/nsp3597V597VgtGgtA37B.1.6210.000266
ORF1ab/nsp3597V597GgTGgGT46All0.000001
ORF1ab/nsp3597V597GgTggGg26All0
ORF1ab/nsp3597V597VgtGgtT56AY.1000.00023
ORF1ab/nsp3597V597VgtGgtA16AY.1000.000046
ORF1ab/nsp3597V597VgtGgtT66AY.1060.002009
ORF1ab/nsp3597V597VgtGgtT66AY.360.000889
ORF1ab/nsp3597V597LGtgTtg66AY.430.000027
ORF1ab/nsp3597V597AgTggCg66AY.9.20.00022
ORF1ab/nsp3597V597VgtGgtT66B.1.1260.007653
ORF1ab/nsp3597V597VgtGgtT66B.1.130.014252
ORF1ab/nsp3597V597MGtgAtg66B.1.3510.000178
ORF1ab/nsp3597V597VgtGgtT66B.1.3960.004234
ORF1ab/nsp3597V597MGtgAtg66B.1.617.20.000023
ORF1ab/nsp3597V597delGTG---66B.1.617.20.000023
ORF1ab/nsp3597V597MGtgAtg66C.160.006363
ORF1ab/nsp3597V597VgtGgtT55AY.1210.000677
ORF1ab/nsp3597V597LGtgTtg55AY.40.000008
ORF1ab/nsp3597V597delGTG---55AY.420.000201
ORF1ab/nsp3597V597delGTG---55AY.430.000022
ORF1ab/nsp3597V597MGtgAtg55AY.75.10.000902
ORF1ab/nsp3597V597LGtgTtg55B.10.000046
ORF1ab/nsp3597V597VgtGgtT55B.1.1.1980.007342
ORF1ab/nsp3597V597VgtGgtT45B.1.1.370.000771
ORF1ab/nsp3597V597VgtGgtA15B.1.1.370.000193
ORF1ab/nsp3597V597delGTG---55B.1.1770.000066
ORF1ab/nsp3597V597MGtgAtg55B.1.177.420.004472
ORF1ab/nsp3597V597VgtGgtT55B.1.2320.002687
ORF1ab/nsp3597V597VgtGgtT55B.1.3970.024272
ORF1ab/nsp3597V597IGtGAtT55B.1.4290.000118
ORF1ab/nsp3597V597delGTG---55B.1.5250.000566
ORF1ab/nsp3597V597VgtGgtT55B.1.5260.000118
ORF1ab/nsp3597V597VgtGgtT55B.1.6090.002397
ORF1ab/nsp3597V597VgtGgtT55P.1.60.009728
ORF1ab/nsp3597V597MGtgAtg44AY.1020.000106
ORF1ab/nsp3597V597AgTggCg44AY.290.000063
ORF1ab/nsp3597V597VgtGgtT44AY.340.000388
ORF1ab/nsp3597V597LGtgTtg44AY.390.000099
ORF1ab/nsp3597V597VgtGgtT44AY.39.10.000158
ORF1ab/nsp3597V597IGtGAtT44AY.40.000006
ORF1ab/nsp3597V597VgtGgtT44AY.450.000487
ORF1ab/nsp3597V597VgtGgtT44AY.5.30.00135
ORF1ab/nsp3597V597VgtGgtT44AY.670.001857
ORF1ab/nsp3597V597VgtGgtT44AY.800.004515
ORF1ab/nsp3597V597VgtGgtT44AY.9.10.000335
ORF1ab/nsp3597V597VgtGgtT44B.1.1.280.001245
ORF1ab/nsp3597V597VgtGgtT44B.1.1.3020.008299
ORF1ab/nsp3597V597VgtGgtT44B.1.1.3690.001785
ORF1ab/nsp3597V597VgtGgtT44B.1.1700.017241
ORF1ab/nsp3597V597AgTggCg44B.1.177.150.002524
ORF1ab/nsp3597V597VgtGgtT44B.1.177.820.001909
ORF1ab/nsp3597V597VgtGgtT44B.1.2410.003247
ORF1ab/nsp3597V597VgtGgtT44B.1.3490.002859
ORF1ab/nsp3597V597VgtGgtT44B.1.3670.00317
ORF1ab/nsp3597V597VgtGgtT44B.1.6370.000292
ORF1ab/nsp3597V597VgtGgtC24D.20.00015
ORF1ab/nsp3597V597VgtGgtA14D.20.000075
ORF1ab/nsp3597V597VgtGgtT14D.20.000075
ORF1ab/nsp3597V597VgtGgtT44P.1.20.004624
ORF1ab/nsp3597V597VgtGgtA33A.20.001985
ORF1ab/nsp3597V597VgtGgtT33AD.20.000657
ORF1ab/nsp3597V597XGTGTGA23All0
ORF1ab/nsp3597V597XGTgTAg13All0
ORF1ab/nsp3597V597LGtgTtg33AY.1030.000019
ORF1ab/nsp3597V597VgtGgtT33AY.130.000483
ORF1ab/nsp3597V597VgtGgtT33AY.140.000264
ORF1ab/nsp3597V597MGtgAtg33AY.200.000117
ORF1ab/nsp3597V597LGtgTtg33AY.250.000018
ORF1ab/nsp3597V597MGtgAtg33AY.30.00003
ORF1ab/nsp3597V597VgtGgtT33AY.34.10.00153
ORF1ab/nsp3597V597MGtgAtg33AY.370.000948
ORF1ab/nsp3597V597VgtGgtA33AY.39.20.004622
ORF1ab/nsp3597V597VgtGgtT33AY.400.002893
ORF1ab/nsp3597V597VgtGgtT23AY.46.40.000329
ORF1ab/nsp3597V597VgtGgtA13AY.46.40.000165
ORF1ab/nsp3597V597VgtGgtT33AY.46.60.000217
ORF1ab/nsp3597V597VgtGgtT33AY.510.002727
ORF1ab/nsp3597V597VgtGgtT33AY.640.001786
ORF1ab/nsp3597V597AgTggCg33AY.740.000347
ORF1ab/nsp3597V597VgtGgtT33AY.75.10.000541
ORF1ab/nsp3597V597delGTG---33AY.9.10.000251
ORF1ab/nsp3597V597VgtGgtT33AY.980.000237
ORF1ab/nsp3597V597delGTG---33B.10.000027
ORF1ab/nsp3597V597MGtgAtg33B.1.10.000054
ORF1ab/nsp3597V597VgtGgtT33B.1.1.2580.009772
ORF1ab/nsp3597V597MGtgAtg33B.1.1.2890.00625
ORF1ab/nsp3597V597VgtGgtT33B.1.1.4340.001046
ORF1ab/nsp3597V597VgtGgtT33B.1.1030.057692
ORF1ab/nsp3597V597VgtGgtT33B.1.110.30.002155
ORF1ab/nsp3597V597AgTggCg33B.1.177.860.00055
ORF1ab/nsp3597V597VgtGgtT33B.1.1890.012876
ORF1ab/nsp3597V597VgtGgtT33B.1.2150.028846
ORF1ab/nsp3597V597VgtGgtT33B.1.351.20.000908
ORF1ab/nsp3597V597VgtGgtT33B.1.36.100.014354
ORF1ab/nsp3597V597VgtGgtA33B.1.3620.004622
ORF1ab/nsp3597V597MGtgAtg33B.1.4270.000151
ORF1ab/nsp3597V597VgtGgtT33B.1.5950.000783
ORF1ab/nsp3597V597VgtGgtT33B.1.6270.006061
ORF1ab/nsp3597V597VgtGgtT33B.1.6310.010101
ORF1ab/nsp3597V597AgTggCg33B.1.9.40.018405
ORF1ab/nsp3597V597VgtGgtT33B.400.001093
ORF1ab/nsp3597V597delGTG---33C.36.30.001702
ORF1ab/nsp3597V597VgtGgtT33P.1.140.000143
ORF1ab/nsp3597V597delGTG---22A0.000774
ORF1ab/nsp3597V597VgtGgtT22A.10.000564
ORF1ab/nsp3597V597VgtGgtT22A.2.50.000998
ORF1ab/nsp3597V597VgtGgtT22A.2.5.20.003145
ORF1ab/nsp3597V597SGTGTCA22All0
ORF1ab/nsp3597V597PGTgCCg12All0
ORF1ab/nsp3597V597PGTGCCC12All0
ORF1ab/nsp3597V597del2GTg--g12All0
ORF1ab/nsp3597V597del2gTGg--12All0
ORF1ab/nsp3597V597VgtGgtT22AY.1010.000981
ORF1ab/nsp3597V597VgtGgtA12AY.1090.00074
ORF1ab/nsp3597V597VgtGgtT12AY.1090.00074
ORF1ab/nsp3597V597MGtgAtg22AY.1130.000285
ORF1ab/nsp3597V597MGtgAtg22AY.1190.000071
ORF1ab/nsp3597V597AgTggCg22AY.1200.000074
ORF1ab/nsp3597V597MGtgAtg22AY.23.10.000835
ORF1ab/nsp3597V597MGtgAtg22AY.260.000057
ORF1ab/nsp3597V597VgtGgtT22AY.3.10.000171
ORF1ab/nsp3597V597LGtgTtg22AY.330.000134
ORF1ab/nsp3597V597VgtGgtT22AY.370.000632
ORF1ab/nsp3597V597MGtgAtg22AY.4.2.10.000298
ORF1ab/nsp3597V597MGtgAtg22AY.46.60.000144
ORF1ab/nsp3597V597VgtGgtT22AY.520.001629
ORF1ab/nsp3597V597VgtGgtT22AY.550.001835
ORF1ab/nsp3597V597VgtGgtT22AY.620.000871
ORF1ab/nsp3597V597VgtGgtT22AY.700.000417
ORF1ab/nsp3597V597VgtGgtA12AY.750.000056
ORF1ab/nsp3597V597VgtGgtT12AY.750.000056
ORF1ab/nsp3597V597LGtgTtg22AY.9.10.000167
ORF1ab/nsp3597V597delGTG---22AY.98.10.000097
ORF1ab/nsp3597V597MGtgAtg22B.10.000018
ORF1ab/nsp3597V597del1gtGgt-22B.10.000018
ORF1ab/nsp3597V597VgtGgtT22B.1.1.10.000653
ORF1ab/nsp3597V597VgtGgtT22B.1.1.2840.000215
ORF1ab/nsp3597V597VgtGgtT22B.1.1.3040.005618
ORF1ab/nsp3597V597VgtGgtT22B.1.1.3160.00185
ORF1ab/nsp3597V597VgtGgtT22B.1.1.4320.002532
ORF1ab/nsp3597V597VgtGgtT22B.1.1.4480.004065
ORF1ab/nsp3597V597VgtGgtT22B.1.1.460.008734
ORF1ab/nsp3597V597delGTG---22B.1.1.5190.000079
ORF1ab/nsp3597V597del1gtGgt-12B.1.1.70.000001
ORF1ab/nsp3597V597del1Gtg-tg12B.1.1.70.000001
ORF1ab/nsp3597V597VgtGgtT22B.1.177.230.006472
ORF1ab/nsp3597V597VgtGgtT22B.1.177.60.001953
ORF1ab/nsp3597V597LGtgTtg22B.1.20.000018
ORF1ab/nsp3597V597AgTggCg22B.1.20.000018
ORF1ab/nsp3597V597del1gtGgt-22B.1.20.000018
ORF1ab/nsp3597V597LGtgTtg22B.1.2400.000431
ORF1ab/nsp3597V597LGtgTtg22B.1.2580.000133
ORF1ab/nsp3597V597delGTG---22B.1.2580.000133
ORF1ab/nsp3597V597del1gtGgt-22B.1.351.20.000605
ORF1ab/nsp3597V597LGtgTtg22B.1.351.20.000605
ORF1ab/nsp3597V597VgtGgtT22B.1.36.160.002849
ORF1ab/nsp3597V597VgtGgtT22B.1.36.170.000988
ORF1ab/nsp3597V597VgtGgtT22B.1.36.80.002
ORF1ab/nsp3597V597AgTggCg12B.1.4290.000024
ORF1ab/nsp3597V597AgTGgCC12B.1.4290.000024
ORF1ab/nsp3597V597VgtGgtT22B.1.4560.006536
ORF1ab/nsp3597V597VgtGgtT22B.1.4700.002809
ORF1ab/nsp3597V597VgtGgtT22B.1.5680.002222
ORF1ab/nsp3597V597VgtGgtT22B.1.5760.001813
ORF1ab/nsp3597V597delGTG---22B.1.6210.000177
ORF1ab/nsp3597V597VgtGgtT22B.390.004662
ORF1ab/nsp3597V597VgtGgtT22C.160.002121
ORF1ab/nsp3597V597VgtGgtA12C.360.000911
ORF1ab/nsp3597V597VgtGgtT12C.360.000911
ORF1ab/nsp3597V597GgTGgGT22C.36.30.001134
ORF1ab/nsp3597V597AgTggCg22D.20.00015
ORF1ab/nsp3597V597delGTG---22P.10.000032
ORF1ab/nsp3597V597VgtGgtT22P.1.10.000635
ORF1ab/nsp3597V597MGtgAtg22P.1.70.000639
ORF1ab/nsp3597V597VgtGgtT22P.60.006289
ORF1ab/nsp3597V597VgtGgtT11A.2.20.001689
ORF1ab/nsp3597V597delGTG---11A.2.20.001689
ORF1ab/nsp3597V597VgtGgtT11A.23.10.000704
ORF1ab/nsp3597V597VgtGgtT11AK.10.012658
ORF1ab/nsp3597V597TGTGACA11All0
ORF1ab/nsp3597V597KGTgAAg11All0
ORF1ab/nsp3597V597QGTGCAA11All0
ORF1ab/nsp3597V597EgTggAg11All0
ORF1ab/nsp3597V597DgTGgAC11All0
ORF1ab/nsp3597V597VgtGgtT11AP.10.001502
ORF1ab/nsp3597V597delGTG---11AY.1020.000027
ORF1ab/nsp3597V597LGtgTtg11AY.1020.000027
ORF1ab/nsp3597V597AgTggCg11AY.1030.000006
ORF1ab/nsp3597V597VgtGgtT11AY.1110.000183
ORF1ab/nsp3597V597VgtGgtT11AY.1130.000142
ORF1ab/nsp3597V597VgtGgtT11AY.1140.000231
ORF1ab/nsp3597V597VgtGgtA11AY.116.10.000311
ORF1ab/nsp3597V597delGTG---11AY.1180.000063
ORF1ab/nsp3597V597VgtGgtT11AY.120.000316
ORF1ab/nsp3597V597VgtGgtT11AY.120.10.000321
ORF1ab/nsp3597V597LGtgTtg11AY.140.000088
ORF1ab/nsp3597V597VgtGgtA11AY.190.00114
ORF1ab/nsp3597V597MGtgAtg11AY.220.002092
ORF1ab/nsp3597V597delGTG---11AY.230.00007
ORF1ab/nsp3597V597LGtgTtg11AY.23.10.000417
ORF1ab/nsp3597V597VgtGgtT11AY.240.000431
ORF1ab/nsp3597V597delGTG---11AY.250.000006
ORF1ab/nsp3597V597LGtgTtg11AY.260.000028
ORF1ab/nsp3597V597MGtgAtg11AY.290.000016
ORF1ab/nsp3597V597VgtGgtT11AY.29.10.000221
ORF1ab/nsp3597V597delGTG---11AY.330.000067
ORF1ab/nsp3597V597LGtgTtg11AY.340.000097
ORF1ab/nsp3597V597MGtgAtg11AY.350.000233
ORF1ab/nsp3597V597delGTG---11AY.350.000233
ORF1ab/nsp3597V597LGtgTtg11AY.39.10.00004
ORF1ab/nsp3597V597VgtGgtT11AY.39.1.10.000725
ORF1ab/nsp3597V597AgTggCg11AY.40.000002
ORF1ab/nsp3597V597MGtgAtg11AY.4.20.000022
ORF1ab/nsp3597V597VgtGgtT11AY.4.40.000409
ORF1ab/nsp3597V597delGTG---11AY.4.50.000107
ORF1ab/nsp3597V597delGTG---11AY.410.000294
ORF1ab/nsp3597V597VgtGgtT11AY.410.000294
ORF1ab/nsp3597V597KGTgAAg11AY.410.000294
ORF1ab/nsp3597V597AgTggCg11AY.430.000004
ORF1ab/nsp3597V597DgTGgAC11AY.430.000004
ORF1ab/nsp3597V597delGTG---11AY.440.000006
ORF1ab/nsp3597V597LGtgTtg11AY.440.000006
ORF1ab/nsp3597V597LGtgTtg11AY.450.000122
ORF1ab/nsp3597V597LGtgTtg11AY.460.000104
ORF1ab/nsp3597V597SGTGTCA11AY.46.60.000072
ORF1ab/nsp3597V597LGtgTtg11AY.470.000031
ORF1ab/nsp3597V597MGtgAtg11AY.50.000021
ORF1ab/nsp3597V597delGTG---11AY.50.000021
ORF1ab/nsp3597V597delGTG---11AY.520.000814
ORF1ab/nsp3597V597VgtGgtT11AY.530.000288
ORF1ab/nsp3597V597VgtGgtT11AY.540.000095
ORF1ab/nsp3597V597VgtGgtT11AY.560.001605
ORF1ab/nsp3597V597VgtGgtT11AY.590.00053
ORF1ab/nsp3597V597LGtgTtg11AY.610.000105
ORF1ab/nsp3597V597delGTG---11AY.650.000533
ORF1ab/nsp3597V597delGTG---11AY.660.00107
ORF1ab/nsp3597V597delGTG---11AY.670.000464
ORF1ab/nsp3597V597delGTG---11AY.680.000274
ORF1ab/nsp3597V597VgtGgtT11AY.690.000187
ORF1ab/nsp3597V597VgtGgtT11AY.70.000196
ORF1ab/nsp3597V597XGTGTGA11AY.7.20.000559
ORF1ab/nsp3597V597VgtGgtT11AY.7.20.000559
ORF1ab/nsp3597V597VgtGgtT11AY.710.000475
ORF1ab/nsp3597V597VgtGgtA11AY.740.000116
ORF1ab/nsp3597V597del2gTGg--11AY.780.001541
ORF1ab/nsp3597V597VgtGgtT11AY.820.001357
ORF1ab/nsp3597V597SGTGTCA11AY.9.10.000084
ORF1ab/nsp3597V597delGTG---11AY.9.20.000037
ORF1ab/nsp3597V597IGtGAtA11AY.9.20.000037
ORF1ab/nsp3597V597MGtgAtg11AY.9.2.10.001976
ORF1ab/nsp3597V597VgtGgtT11AY.940.000443
ORF1ab/nsp3597V597delGTG---11AY.950.000761
ORF1ab/nsp3597V597VgtGgtT11AY.960.002075
ORF1ab/nsp3597V597MGtgAtg11AY.980.000079
ORF1ab/nsp3597V597delGTG---11AY.990.001049
ORF1ab/nsp3597V597del1gtGgt-11B0.000128
ORF1ab/nsp3597V597GgTggGg11B.1.10.000018
ORF1ab/nsp3597V597AgTggCg11B.1.10.000018
ORF1ab/nsp3597V597delGTG---11B.1.10.000018
ORF1ab/nsp3597V597VgtGgtT11B.1.1.1410.002012
ORF1ab/nsp3597V597delGTG---11B.1.1.1420.017544
ORF1ab/nsp3597V597VgtGgtT11B.1.1.1530.001095
ORF1ab/nsp3597V597MGtgAtg11B.1.1.1590.004673
ORF1ab/nsp3597V597VgtGgtT11B.1.1.160.055556
ORF1ab/nsp3597V597LGtgCtg11B.1.1.2200.001859
ORF1ab/nsp3597V597VgtGgtT11B.1.1.2220.000204
ORF1ab/nsp3597V597VgtGgtT11B.1.1.2240.014286
ORF1ab/nsp3597V597VgtGgtT11B.1.1.250.000569
ORF1ab/nsp3597V597VgtGgtT11B.1.1.270.00565
ORF1ab/nsp3597V597VgtGgtT11B.1.1.2720.005208
ORF1ab/nsp3597V597delGTG---11B.1.1.3150.008475
ORF1ab/nsp3597V597PGTgCCg11B.1.1.3170.000412
ORF1ab/nsp3597V597MGtgAtg11B.1.1.3480.000796
ORF1ab/nsp3597V597VgtGgtT11B.1.1.3540.004386
ORF1ab/nsp3597V597VgtGgtT11B.1.1.3560.008547
ORF1ab/nsp3597V597MGtgAtg11B.1.1.370.000193
ORF1ab/nsp3597V597VgtGgtT11B.1.1.3770.001381
ORF1ab/nsp3597V597AgTggCg11B.1.1.390.00051
ORF1ab/nsp3597V597VgtGgtT11B.1.1.390.00051
ORF1ab/nsp3597V597delGTG---11B.1.1.3970.002252
ORF1ab/nsp3597V597delGTG---11B.1.1.4090.002833
ORF1ab/nsp3597V597VgtGgtT11B.1.1.4160.000905
ORF1ab/nsp3597V597VgtGgtT11B.1.1.610.008772
ORF1ab/nsp3597V597EgTggAg11B.1.1.70.000001
ORF1ab/nsp3597V597PGTGCCC11B.1.1.70.000001
ORF1ab/nsp3597V597AgTggCg11B.1.1.70.000001
ORF1ab/nsp3597V597VgtGgtT11B.1.1.740.00431
ORF1ab/nsp3597V597VgtGgtT11B.1.1120.005181
ORF1ab/nsp3597V597VgtGgtT11B.1.1420.002899
ORF1ab/nsp3597V597VgtGgtT11B.1.1460.004237
ORF1ab/nsp3597V597delGTG---11B.1.1570.002985
ORF1ab/nsp3597V597LGtgTtg11B.1.1600.000031
ORF1ab/nsp3597V597AgTggCg11B.1.1600.000031
ORF1ab/nsp3597V597AgTggCg11B.1.1770.000013
ORF1ab/nsp3597V597GgTGgGT11B.1.1770.000013
ORF1ab/nsp3597V597LGtgCtg11B.1.1770.000013
ORF1ab/nsp3597V597MGtgAtg11B.1.1770.000013
ORF1ab/nsp3597V597VgtGgtT11B.1.177.100.000878
ORF1ab/nsp3597V597VgtGgtT11B.1.177.110.001698
ORF1ab/nsp3597V597VgtGgtT11B.1.177.120.000152
ORF1ab/nsp3597V597VgtGgtT11B.1.177.160.000664
ORF1ab/nsp3597V597delGTG---11B.1.177.170.000821
ORF1ab/nsp3597V597delGTG---11B.1.177.190.001431
ORF1ab/nsp3597V597delGTG---11B.1.177.510.004566
ORF1ab/nsp3597V597VgtGgtT11B.1.177.560.000668
ORF1ab/nsp3597V597delGTG---11B.1.177.630.002703
ORF1ab/nsp3597V597VgtGgtT11B.1.177.810.000189
ORF1ab/nsp3597V597delGTG---11B.1.177.870.000728
ORF1ab/nsp3597V597MGtgAtg11B.1.1880.016667
ORF1ab/nsp3597V597VgtGgtT11B.1.1920.009259
ORF1ab/nsp3597V597VgtGgtT11B.1.1950.005025
ORF1ab/nsp3597V597delGTG---11B.1.20.000009
ORF1ab/nsp3597V597MGtgAtg11B.1.20.000009
ORF1ab/nsp3597V597LGtgTtg11B.1.2060.000816
ORF1ab/nsp3597V597VgtGgtT11B.1.2200.01087
ORF1ab/nsp3597V597del1gtGgt-11B.1.221.30.000833
ORF1ab/nsp3597V597delGTG---11B.1.230.006061
ORF1ab/nsp3597V597VgtGgtT11B.1.2340.000132
ORF1ab/nsp3597V597VgtGgtT11B.1.2360.002053
ORF1ab/nsp3597V597AgTggCg11B.1.2400.000216
ORF1ab/nsp3597V597MGtgAtg11B.1.2430.00007
ORF1ab/nsp3597V597GgTggGg11B.1.2430.00007
ORF1ab/nsp3597V597VgtGgtT11B.1.258.140.00098
ORF1ab/nsp3597V597VgtGgtT11B.1.258.170.000104
ORF1ab/nsp3597V597VgtGgtT11B.1.2700.005618
ORF1ab/nsp3597V597delGTG---11B.1.3190.003049
ORF1ab/nsp3597V597VgtGgtT11B.1.3200.001245
ORF1ab/nsp3597V597LGtgTtg11B.1.3240.001605
ORF1ab/nsp3597V597VgtGgtT11B.1.3290.000608
ORF1ab/nsp3597V597MGtgAtg11B.1.3380.008621
ORF1ab/nsp3597V597VgtGgtT11B.1.3400.004292
ORF1ab/nsp3597V597LGtgTtg11B.1.3510.00003
ORF1ab/nsp3597V597VgtGgtT11B.1.351.10.038462
ORF1ab/nsp3597V597delGTG---11B.1.360.000146
ORF1ab/nsp3597V597delGTG---11B.1.36.170.000494
ORF1ab/nsp3597V597LGtgTtg11B.1.36.290.000517
ORF1ab/nsp3597V597VgtGgtT11B.1.36.290.000517
ORF1ab/nsp3597V597delGTG---11B.1.36.350.002604
ORF1ab/nsp3597V597VgtGgtT11B.1.36.360.000602
ORF1ab/nsp3597V597VgtGgtT11B.1.3690.000285
ORF1ab/nsp3597V597LGtgTtg11B.1.3690.000285
ORF1ab/nsp3597V597VgtGgtT11B.1.3750.00082
ORF1ab/nsp3597V597VgtGgtT11B.1.3800.006623
ORF1ab/nsp3597V597VgtGgtT11B.1.4000.000429
ORF1ab/nsp3597V597VgtGgtT11B.1.4030.003268
ORF1ab/nsp3597V597VgtGgtA11B.1.4060.006061
ORF1ab/nsp3597V597MGtgAtg11B.1.4290.000024
ORF1ab/nsp3597V597VgtGgtT11B.1.4380.006536
ORF1ab/nsp3597V597VgtGgtT11B.1.4600.017857
ORF1ab/nsp3597V597VgtGgtT11B.1.466.10.007194
ORF1ab/nsp3597V597AgTggCg11B.1.5170.000427
ORF1ab/nsp3597V597VgtGgtT11B.1.5330.009615
ORF1ab/nsp3597V597VgtGgtA11B.1.5510.00129
ORF1ab/nsp3597V597VgtGgtT11B.1.5650.00081
ORF1ab/nsp3597V597LGtgCtg11B.1.5750.000303
ORF1ab/nsp3597V597VgtGgtT11B.1.5750.000303
ORF1ab/nsp3597V597del1gtGgt-11B.1.5950.000261
ORF1ab/nsp3597V597QGTGCAA11B.1.617.20.000004
ORF1ab/nsp3597V597TGTGACA11B.1.617.20.000004
ORF1ab/nsp3597V597GgTGgGT11B.1.617.20.000004
ORF1ab/nsp3597V597del2GTg--g11B.1.617.30.002985
ORF1ab/nsp3597V597XGTgTAg11B.1.6190.000871
ORF1ab/nsp3597V597LGtgTtg11B.1.6210.000089
ORF1ab/nsp3597V597VgtGgtT11B.1.621.10.000506
ORF1ab/nsp3597V597MGtgAtg11B.1.6230.000536
ORF1ab/nsp3597V597VgtGgtT11B.1.6230.000536
ORF1ab/nsp3597V597MGtgAtg11B.1.6280.000352
ORF1ab/nsp3597V597VgtGgtT11B.1.6280.000352
ORF1ab/nsp3597V597LGtgTtg11B.1.6370.000073
ORF1ab/nsp3597V597MGtgAtg11B.1.6370.000073
ORF1ab/nsp3597V597LGtgCtg11B.1.690.035714
ORF1ab/nsp3597V597MGtgAtg11B.1.780.008547
ORF1ab/nsp3597V597delGTG---11B.150.017544
ORF1ab/nsp3597V597VgtGgtT11C.1.20.004255
ORF1ab/nsp3597V597VgtGgtT11C.130.025641
ORF1ab/nsp3597V597delGTG---11C.360.000911
ORF1ab/nsp3597V597LGtGCtC11C.36.30.000567
ORF1ab/nsp3597V597XGTGTGA11C.36.30.000567
ORF1ab/nsp3597V597LGtgTtg11D.20.000075
ORF1ab/nsp3597V597VgtGgtT11N.40.004255
ORF1ab/nsp3597V597VgtGgtT11N.50.001767
ORF1ab/nsp3597V597MGtgAtg11P.10.000016
ORF1ab/nsp3597V597LGtgTtg11P.10.000016
ORF1ab/nsp3597V597delGTG---11P.1.10.000318
ORF1ab/nsp3597V597VgtGgtT11P.1.150.000232
ORF1ab/nsp3597V597delGTG---11P.1.40.000977
ORF1ab/nsp3597V597VgtGgtT11P.1.70.000319
ORF1ab/nsp3597V597delGTG---11Q.80.000165
ORF1ab/nsp3597V597VgtGgtT11Q.80.000165
ORF1ab/nsp3597V597delGTG---11R.10.00009
ORF1ab/nsp3597V597VgtGgtT11Y.10.012821