CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 595

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3595E595DE1413DnonsyngaGgaT473347140.9959864502-4504
ORF1ab/nsp3595E595DE1413DnonsyngaGgaC4733190.004014374502-4504
ORF1ab/nsp3595E595EE1413EsyngaGgaA1709170914502-4504
ORF1ab/nsp3595E595KE1413KnonsynGagAag3093070.9935284502-4504
ORF1ab/nsp3595E595KE1413KnonsynGaGAaA30920.006472494502-4504
ORF1ab/nsp3595E595AE1413AnonsyngAggCg1531520.9934644502-4504
ORF1ab/nsp3595E595AE1413AnonsyngAGgCA15310.006535954502-4504
ORF1ab/nsp3595E595delE1413deldelGAG---12712714502-4504
ORF1ab/nsp3595E595GE1413GnonsyngAggGg10810814502-4504
ORF1ab/nsp3595E595VE1413VnonsyngAggTg93900.9677424502-4504
ORF1ab/nsp3595E595VE1413VnonsyngAGgTT9310.01075274502-4504
ORF1ab/nsp3595E595VE1413VnonsyngAGgTA9310.01075274502-4504
ORF1ab/nsp3595E595VE1413VnonsyngAGgTC9310.01075274502-4504
ORF1ab/nsp3595E595XE1413XnonsynGagTag20190.954502-4504
ORF1ab/nsp3595E595XE1413XnonsynGaGTaA2010.054502-4504
ORF1ab/nsp3595E595del1E1413del1delgaGga-1160.5454554502-4504
ORF1ab/nsp3595E595del1E1413del1delGag-ag1120.1818184502-4504
ORF1ab/nsp3595E595del1E1413del1delGAG-GA1110.09090914502-4504
ORF1ab/nsp3595E595del1E1413del1delGaGTa-1110.09090914502-4504
ORF1ab/nsp3595E595del1E1413del1delgAgg-g1110.09090914502-4504
ORF1ab/nsp3595E595QE1413QnonsynGagCag101014502-4504
ORF1ab/nsp3595E595del2E1413del2delgAGg--430.754502-4504
ORF1ab/nsp3595E595del2E1413del2delGAg--g410.254502-4504
ORF1ab/nsp3595E595NE1413NnonsynGaGAaT3314502-4504
ORF1ab/nsp3595E595HE1413HnonsynGaGCaT320.6666674502-4504
ORF1ab/nsp3595E595HE1413HnonsynGaGCaC310.3333334502-4504
ORF1ab/nsp3595E595SE1413SnonsynGAGTCT2214502-4504
ORF1ab/nsp3595E595IE1413InonsynGAGATC1114502-4504
ORF1ab/nsp3595E595TE1413TnonsynGAgACg1114502-4504
ORF1ab/nsp3595E595RE1413RnonsynGAGCGC1114502-4504

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3595E595DgaGgaT47144733All0.000902
ORF1ab/nsp3595E595DgaGgaC194733All0.000004
ORF1ab/nsp3595E595EgaGgaA17091709All0.000327
ORF1ab/nsp3595E595DgaGgaT10121016AY.40.001575
ORF1ab/nsp3595E595DgaGgaC41016AY.40.000006
ORF1ab/nsp3595E595DgaGgaT819819AY.440.004985
ORF1ab/nsp3595E595EgaGgaA774774AY.710.367696
ORF1ab/nsp3595E595DgaGgaT474478B.1.1.70.000424
ORF1ab/nsp3595E595DgaGgaC4478B.1.1.70.000004
ORF1ab/nsp3595E595DgaGgaT339339AY.460.035283
ORF1ab/nsp3595E595EgaGgaA338338AY.260.009569
ORF1ab/nsp3595E595KGagAag307309All0.000059
ORF1ab/nsp3595E595KGaGAaA2309All0
ORF1ab/nsp3595E595DgaGgaT303304P.10.004773
ORF1ab/nsp3595E595DgaGgaC1304P.10.000016
ORF1ab/nsp3595E595EgaGgaA280280B.1.1.70.000251
ORF1ab/nsp3595E595KGagAag259259AY.250.001558
ORF1ab/nsp3595E595DgaGgaT249249B.1.221.21
ORF1ab/nsp3595E595DgaGgaT193195B.1.617.20.000727
ORF1ab/nsp3595E595DgaGgaC2195B.1.617.20.000008
ORF1ab/nsp3595E595DgaGgaT178179AY.430.000789
ORF1ab/nsp3595E595DgaGgaC1179AY.430.000004
ORF1ab/nsp3595E595AgAggCg152153All0.000029
ORF1ab/nsp3595E595AgAGgCA1153All0
ORF1ab/nsp3595E595delGAG---127127All0.000024
ORF1ab/nsp3595E595GgAggGg108108All0.000021
ORF1ab/nsp3595E595VgAggTg9093All0.000017
ORF1ab/nsp3595E595VgAGgTC193All0
ORF1ab/nsp3595E595VgAGgTT193All0
ORF1ab/nsp3595E595VgAGgTA193All0
ORF1ab/nsp3595E595AgAggCg8383AY.40.000129
ORF1ab/nsp3595E595DgaGgaT7575AY.650.039979
ORF1ab/nsp3595E595DgaGgaT6161AY.1130.008686
ORF1ab/nsp3595E595EgaGgaA5858AY.40.00009
ORF1ab/nsp3595E595DgaGgaT5656AY.250.000337
ORF1ab/nsp3595E595DgaGgaT5555B.1.20.000484
ORF1ab/nsp3595E595DgaGgaT4747AY.1030.000292
ORF1ab/nsp3595E595DgaGgaT4545AY.1020.001193
ORF1ab/nsp3595E595VgAggTg3535AY.4.50.003762
ORF1ab/nsp3595E595DgaGgaT3334B.10.000302
ORF1ab/nsp3595E595DgaGgaC134B.10.000009
ORF1ab/nsp3595E595EgaGgaA3434B.1.617.20.000128
ORF1ab/nsp3595E595DgaGgaT3333A.2.50.016467
ORF1ab/nsp3595E595DgaGgaT3232AY.5.40.008854
ORF1ab/nsp3595E595EgaGgaA3131B.1.1.2840.003329
ORF1ab/nsp3595E595DgaGgaT2929AY.30.000288
ORF1ab/nsp3595E595EgaGgaA2828B.1.1.2890.058333
ORF1ab/nsp3595E595DgaGgaT2828Q.30.004061
ORF1ab/nsp3595E595delGAG---2626B.1.1.70.000023
ORF1ab/nsp3595E595AgAggCg2525B.1.1.70.000022
ORF1ab/nsp3595E595DgaGgaT2323B.1.1.2140.001276
ORF1ab/nsp3595E595DgaGgaT2323B.1.1600.000717
ORF1ab/nsp3595E595DgaGgaT2222B.1.1.4160.01991
ORF1ab/nsp3595E595DgaGgaT2222B.1.1770.00029
ORF1ab/nsp3595E595DgaGgaT2121AY.230.001465
ORF1ab/nsp3595E595XGagTag1920All0.000004
ORF1ab/nsp3595E595XGaGTaA120All0
ORF1ab/nsp3595E595GgAggGg2020AY.60.000823
ORF1ab/nsp3595E595DgaGgaT2020B.1.4290.000471
ORF1ab/nsp3595E595EgaGgaA1717B.10.000156
ORF1ab/nsp3595E595AgAggCg1717B.1.617.20.000064
ORF1ab/nsp3595E595DgaGgaT1717P.40.064639
ORF1ab/nsp3595E595VgAggTg1616B.1.1.250.009096
ORF1ab/nsp3595E595GgAggGg1616P.1.140.000765
ORF1ab/nsp3595E595DgaGgaT1515AY.420.000603
ORF1ab/nsp3595E595VgAggTg1414B.1.1.70.000013
ORF1ab/nsp3595E595DgaGgaT1414P.1.160.005238
ORF1ab/nsp3595E595DgaGgaT1414Q.80.002309
ORF1ab/nsp3595E595DgaGgaT1313AY.390.000321
ORF1ab/nsp3595E595VgAggTg1313AY.40.00002
ORF1ab/nsp3595E595GgAggGg1313AY.880.011494
ORF1ab/nsp3595E595GgAggGg1212B.1.1.70.000011
ORF1ab/nsp3595E595del1gaGga-611All0.000001
ORF1ab/nsp3595E595del1Gag-ag211All0
ORF1ab/nsp3595E595del1gAgg-g111All0
ORF1ab/nsp3595E595del1GAG-GA111All0
ORF1ab/nsp3595E595del1GaGTa-111All0
ORF1ab/nsp3595E595EgaGgaA1111B.1.2210.000781
ORF1ab/nsp3595E595DgaGgaT1111B.1.2400.002371
ORF1ab/nsp3595E595DgaGgaT1111B.1.360.001605
ORF1ab/nsp3595E595QGagCag1010All0.000002
ORF1ab/nsp3595E595DgaGgaT1010AY.1200.000372
ORF1ab/nsp3595E595delGAG---1010AY.40.000016
ORF1ab/nsp3595E595DgaGgaT1010AY.740.001156
ORF1ab/nsp3595E595DgaGgaT1010P.1.120.00484
ORF1ab/nsp3595E595DgaGgaT99AE.80.004401
ORF1ab/nsp3595E595GgAggGg99AY.250.000054
ORF1ab/nsp3595E595DgaGgaT99AY.260.000255
ORF1ab/nsp3595E595DgaGgaT99AY.330.000601
ORF1ab/nsp3595E595DgaGgaT99B.1.10.000163
ORF1ab/nsp3595E595KGagAag99B.1.3670.007132
ORF1ab/nsp3595E595KGagAag99B.1.617.20.000034
ORF1ab/nsp3595E595EgaGgaA88AY.1130.001139
ORF1ab/nsp3595E595EgaGgaA88AY.250.000048
ORF1ab/nsp3595E595delGAG---88AY.430.000035
ORF1ab/nsp3595E595DgaGgaT78AY.60.000288
ORF1ab/nsp3595E595DgaGgaC18AY.60.000041
ORF1ab/nsp3595E595DgaGgaT88AY.720.010884
ORF1ab/nsp3595E595DgaGgaT88B.1.3510.000238
ORF1ab/nsp3595E595DgaGgaT88B.1.6050.047619
ORF1ab/nsp3595E595AgAggCg77AY.1030.000043
ORF1ab/nsp3595E595DgaGgaT77AY.4.20.000152
ORF1ab/nsp3595E595EgaGgaA77AY.430.000031
ORF1ab/nsp3595E595DgaGgaT77AY.46.50.001389
ORF1ab/nsp3595E595DgaGgaT77AY.610.000733
ORF1ab/nsp3595E595DgaGgaT77AY.980.000553
ORF1ab/nsp3595E595DgaGgaT77B.1.1.5280.033654
ORF1ab/nsp3595E595EgaGgaA77B.1.20.000062
ORF1ab/nsp3595E595DgaGgaT77B.1.617.10.000903
ORF1ab/nsp3595E595EgaGgaA66AY.1030.000037
ORF1ab/nsp3595E595GgAggGg66AY.40.000009
ORF1ab/nsp3595E595DgaGgaT66AY.840.002625
ORF1ab/nsp3595E595KGagAag56B.1.1.70.000004
ORF1ab/nsp3595E595KGaGAaA16B.1.1.70.000001
ORF1ab/nsp3595E595DgaGgaT66B.1.2210.000426
ORF1ab/nsp3595E595DgaGgaT66B.1.2340.000792
ORF1ab/nsp3595E595DgaGgaT66B.1.6370.000438
ORF1ab/nsp3595E595DgaGgaT66P.1.130.005391
ORF1ab/nsp3595E595DgaGgaT66P.1.150.001394
ORF1ab/nsp3595E595DgaGgaC35A0.001161
ORF1ab/nsp3595E595DgaGgaT25A0.000774
ORF1ab/nsp3595E595DgaGgaT55AY.1180.000313
ORF1ab/nsp3595E595DgaGgaT55AY.1210.000677
ORF1ab/nsp3595E595DgaGgaT55AY.200.000194
ORF1ab/nsp3595E595DgaGgaT55AY.270.000324
ORF1ab/nsp3595E595AgAggCg55AY.30.00005
ORF1ab/nsp3595E595delGAG---55AY.420.000201
ORF1ab/nsp3595E595DgaGgaT55AY.700.001043
ORF1ab/nsp3595E595DgaGgaT55AY.920.001436
ORF1ab/nsp3595E595XGagTag55B.10.000046
ORF1ab/nsp3595E595delGAG---55B.1.1770.000066
ORF1ab/nsp3595E595DgaGgaT55B.1.2520.033113
ORF1ab/nsp3595E595EgaGgaA55B.1.4270.000252
ORF1ab/nsp3595E595DgaGgaT55B.1.5260.000118
ORF1ab/nsp3595E595DgaGgaT55B.1.5620.092593
ORF1ab/nsp3595E595del2gAGg--34All0.000001
ORF1ab/nsp3595E595del2GAg--g14All0
ORF1ab/nsp3595E595DgaGgaT44AY.1190.000141
ORF1ab/nsp3595E595DgaGgaT44AY.290.000063
ORF1ab/nsp3595E595EgaGgaA44AY.290.000063
ORF1ab/nsp3595E595DgaGgaT44AY.360.000593
ORF1ab/nsp3595E595EgaGgaA44AY.39.10.000158
ORF1ab/nsp3595E595EgaGgaA44AY.440.000024
ORF1ab/nsp3595E595DgaGgaT44AY.750.000224
ORF1ab/nsp3595E595QGagCag44B.1.1.2260.023256
ORF1ab/nsp3595E595DgaGgaT44B.1.1.2790.004484
ORF1ab/nsp3595E595DgaGgaT44B.1.1.3060.001754
ORF1ab/nsp3595E595DgaGgaT44B.1.1.3180.001207
ORF1ab/nsp3595E595DgaGgaT44B.1.258.40.013793
ORF1ab/nsp3595E595delGAG---44B.1.5250.000453
ORF1ab/nsp3595E595DgaGgaT44B.1.5750.001214
ORF1ab/nsp3595E595delGAG---44B.1.617.20.000015
ORF1ab/nsp3595E595GgAggGg44B.1.617.20.000015
ORF1ab/nsp3595E595DgaGgaT44C.350.003096
ORF1ab/nsp3595E595DgaGgaT44P.1.10.001271
ORF1ab/nsp3595E595DgaGgaT33A.190.028302
ORF1ab/nsp3595E595NGaGAaT33All0.000001
ORF1ab/nsp3595E595HGaGCaT23All0
ORF1ab/nsp3595E595HGaGCaC13All0
ORF1ab/nsp3595E595DgaGgaT33AY.1000.000138
ORF1ab/nsp3595E595AgAggCg33AY.1020.00008
ORF1ab/nsp3595E595EgaGgaA33AY.1020.00008
ORF1ab/nsp3595E595DgaGgaT33AY.1170.000254
ORF1ab/nsp3595E595DgaGgaT33AY.120.2.10.001495
ORF1ab/nsp3595E595DgaGgaT33AY.150.006667
ORF1ab/nsp3595E595KGagAag33AY.30.00003
ORF1ab/nsp3595E595EgaGgaA33AY.30.00003
ORF1ab/nsp3595E595EgaGgaA33AY.330.0002
ORF1ab/nsp3595E595DgaGgaT33AY.340.000291
ORF1ab/nsp3595E595DgaGgaT33AY.380.001498
ORF1ab/nsp3595E595EgaGgaA33AY.390.000074
ORF1ab/nsp3595E595EgaGgaA33AY.4.50.000322
ORF1ab/nsp3595E595DgaGgaT33AY.450.000365
ORF1ab/nsp3595E595DgaGgaT33AY.470.000093
ORF1ab/nsp3595E595delGAG---33AY.9.10.000251
ORF1ab/nsp3595E595VgAggTg33B.10.000027
ORF1ab/nsp3595E595DgaGgaT33B.1.1.1640.015464
ORF1ab/nsp3595E595DgaGgaT33B.1.1.2940.003797
ORF1ab/nsp3595E595DgaGgaT33B.1.1.370.000579
ORF1ab/nsp3595E595EgaGgaA33B.1.1.4340.001046
ORF1ab/nsp3595E595DgaGgaT33B.1.1.5190.000119
ORF1ab/nsp3595E595KGagAag33B.1.1770.00004
ORF1ab/nsp3595E595KGagAag33B.1.20.000026
ORF1ab/nsp3595E595EgaGgaA33B.1.2430.000209
ORF1ab/nsp3595E595DgaGgaT33B.1.36.80.003
ORF1ab/nsp3595E595EgaGgaA33B.1.4560.009804
ORF1ab/nsp3595E595DgaGgaT33B.1.466.20.001174
ORF1ab/nsp3595E595DgaGgaT33B.1.5250.000339
ORF1ab/nsp3595E595DgaGgaT33B.1.621.10.001517
ORF1ab/nsp3595E595DgaGgaT33N.30.017442
ORF1ab/nsp3595E595DgaGgaT33P.1.140.000143
ORF1ab/nsp3595E595DgaGgaT33P.1.170.000485
ORF1ab/nsp3595E595EgaGgaA33R.10.00027
ORF1ab/nsp3595E595delGAG---22A0.000774
ORF1ab/nsp3595E595SGAGTCT22All0
ORF1ab/nsp3595E595EgaGgaA22AT.10.010256
ORF1ab/nsp3595E595GgAggGg22AY.1030.000012
ORF1ab/nsp3595E595EgaGgaA22AY.130.000322
ORF1ab/nsp3595E595EgaGgaA22AY.140.000176
ORF1ab/nsp3595E595GgAggGg22AY.290.000032
ORF1ab/nsp3595E595DgaGgaT22AY.300.000791
ORF1ab/nsp3595E595GgAggGg22AY.330.000134
ORF1ab/nsp3595E595KGagAag22AY.40.000003
ORF1ab/nsp3595E595EgaGgaA22AY.420.00008
ORF1ab/nsp3595E595delGAG---22AY.440.000012
ORF1ab/nsp3595E595DgaGgaT22AY.46.60.000144
ORF1ab/nsp3595E595DgaGgaT22AY.50.000041
ORF1ab/nsp3595E595DgaGgaT22AY.5.30.000675
ORF1ab/nsp3595E595DgaGgaT22AY.590.001059
ORF1ab/nsp3595E595DgaGgaT22AY.90.000135
ORF1ab/nsp3595E595EgaGgaA22AY.9.20.000073
ORF1ab/nsp3595E595KGagAag22AY.920.000575
ORF1ab/nsp3595E595EgaGgaA22AY.98.10.000097
ORF1ab/nsp3595E595delGAG---22AY.98.10.000097
ORF1ab/nsp3595E595GgAggGg22B.10.000018
ORF1ab/nsp3595E595delGAG---22B.10.000018
ORF1ab/nsp3595E595EgaGgaA22B.1.10.000036
ORF1ab/nsp3595E595EgaGgaA22B.1.1.2140.000111
ORF1ab/nsp3595E595EgaGgaA22B.1.1.2200.003717
ORF1ab/nsp3595E595DgaGgaT12B.1.1.280.000311
ORF1ab/nsp3595E595DgaGgaC12B.1.1.280.000311
ORF1ab/nsp3595E595DgaGgaT22B.1.1.3480.001592
ORF1ab/nsp3595E595DgaGgaT22B.1.1.3720.001377
ORF1ab/nsp3595E595delGAG---22B.1.1.5190.000079
ORF1ab/nsp3595E595XGagTag22B.1.1.70.000002
ORF1ab/nsp3595E595del1gaGga-22B.1.1.70.000002
ORF1ab/nsp3595E595QGagCag22B.1.1.70.000002
ORF1ab/nsp3595E595DgaGgaT22B.1.177.60.001953
ORF1ab/nsp3595E595EgaGgaA22B.1.2340.000264
ORF1ab/nsp3595E595delGAG---22B.1.2580.000133
ORF1ab/nsp3595E595DgaGgaT22B.1.2580.000133
ORF1ab/nsp3595E595EgaGgaA22B.1.351.20.000605
ORF1ab/nsp3595E595EgaGgaA22B.1.4290.000047
ORF1ab/nsp3595E595AgAggCg22B.1.4290.000047
ORF1ab/nsp3595E595DgaGgaT22B.1.4560.006536
ORF1ab/nsp3595E595DgaGgaT22B.1.4700.002809
ORF1ab/nsp3595E595AgAggCg22B.1.5250.000226
ORF1ab/nsp3595E595DgaGgaT22B.1.5960.000174
ORF1ab/nsp3595E595delGAG---22B.1.6210.000177
ORF1ab/nsp3595E595DgaGgaT22B.230.005848
ORF1ab/nsp3595E595DgaGgaT22B.60.00182
ORF1ab/nsp3595E595delGAG---22C.36.30.001134
ORF1ab/nsp3595E595NGaGAaT22C.36.30.001134
ORF1ab/nsp3595E595delGAG---22P.10.000032
ORF1ab/nsp3595E595GgAggGg22P.20.000373
ORF1ab/nsp3595E595delGAG---11A.2.20.001689
ORF1ab/nsp3595E595DgaGgaT11A.2.20.001689
ORF1ab/nsp3595E595VgAggTg11AA.10.007246
ORF1ab/nsp3595E595IGAGATC11All0
ORF1ab/nsp3595E595TGAgACg11All0
ORF1ab/nsp3595E595RGAGCGC11All0
ORF1ab/nsp3595E595DgaGgaT11AU.20.002421
ORF1ab/nsp3595E595EgaGgaA11AY.100.00053
ORF1ab/nsp3595E595delGAG---11AY.1020.000027
ORF1ab/nsp3595E595IGAGATC11AY.1020.000027
ORF1ab/nsp3595E595del1Gag-ag11AY.1030.000006
ORF1ab/nsp3595E595KGagAag11AY.1030.000006
ORF1ab/nsp3595E595DgaGgaT11AY.1060.000335
ORF1ab/nsp3595E595DgaGgaT11AY.1070.000466
ORF1ab/nsp3595E595DgaGgaT11AY.1080.001103
ORF1ab/nsp3595E595DgaGgaT11AY.1140.000231
ORF1ab/nsp3595E595delGAG---11AY.1160.000287
ORF1ab/nsp3595E595delGAG---11AY.1180.000063
ORF1ab/nsp3595E595EgaGgaA11AY.1190.000035
ORF1ab/nsp3595E595GgAggGg11AY.1190.000035
ORF1ab/nsp3595E595EgaGgaA11AY.1200.000037
ORF1ab/nsp3595E595KGagAag11AY.130.000161
ORF1ab/nsp3595E595VgAggTg11AY.140.000088
ORF1ab/nsp3595E595GgAggGg11AY.140.000088
ORF1ab/nsp3595E595EgaGgaA11AY.16.10.00047
ORF1ab/nsp3595E595delGAG---11AY.230.00007
ORF1ab/nsp3595E595KGagAag11AY.230.00007
ORF1ab/nsp3595E595KGagAag11AY.23.10.000417
ORF1ab/nsp3595E595delGAG---11AY.250.000006
ORF1ab/nsp3595E595AgAggCg11AY.270.000065
ORF1ab/nsp3595E595del1GaGTa-11AY.30.00001
ORF1ab/nsp3595E595DgaGgaT11AY.3.10.000085
ORF1ab/nsp3595E595delGAG---11AY.330.000067
ORF1ab/nsp3595E595AgAggCg11AY.340.000097
ORF1ab/nsp3595E595DgaGgaT11AY.34.10.00051
ORF1ab/nsp3595E595delGAG---11AY.350.000233
ORF1ab/nsp3595E595EgaGgaA11AY.350.000233
ORF1ab/nsp3595E595EgaGgaA11AY.360.000148
ORF1ab/nsp3595E595DgaGgaT11AY.370.000316
ORF1ab/nsp3595E595AgAggCg11AY.390.000025
ORF1ab/nsp3595E595DgaGgaT11AY.39.10.00004
ORF1ab/nsp3595E595KGagAag11AY.4.10.000737
ORF1ab/nsp3595E595AgAggCg11AY.4.20.000022
ORF1ab/nsp3595E595GgAggGg11AY.4.20.000022
ORF1ab/nsp3595E595DgaGgaT11AY.4.2.10.000149
ORF1ab/nsp3595E595delGAG---11AY.4.50.000107
ORF1ab/nsp3595E595DgaGgaT11AY.400.000964
ORF1ab/nsp3595E595TGAgACg11AY.410.000294
ORF1ab/nsp3595E595QGagCag11AY.420.00004
ORF1ab/nsp3595E595KGagAag11AY.420.00004
ORF1ab/nsp3595E595XGagTag11AY.430.000004
ORF1ab/nsp3595E595KGagAag11AY.430.000004
ORF1ab/nsp3595E595AgAggCg11AY.440.000006
ORF1ab/nsp3595E595GgAggGg11AY.440.000006
ORF1ab/nsp3595E595KGagAag11AY.440.000006
ORF1ab/nsp3595E595EgaGgaA11AY.460.000104
ORF1ab/nsp3595E595KGagAag11AY.460.000104
ORF1ab/nsp3595E595EgaGgaA11AY.46.20.000635
ORF1ab/nsp3595E595EgaGgaA11AY.46.40.000165
ORF1ab/nsp3595E595KGagAag11AY.46.60.000072
ORF1ab/nsp3595E595HGaGCaT11AY.46.60.000072
ORF1ab/nsp3595E595EgaGgaA11AY.470.000031
ORF1ab/nsp3595E595DgaGgaT11AY.480.000465
ORF1ab/nsp3595E595GgAggGg11AY.50.000021
ORF1ab/nsp3595E595EgaGgaA11AY.50.000021
ORF1ab/nsp3595E595delGAG---11AY.50.000021
ORF1ab/nsp3595E595DgaGgaT11AY.5.20.002463
ORF1ab/nsp3595E595EgaGgaA11AY.5.40.000277
ORF1ab/nsp3595E595delGAG---11AY.520.000814
ORF1ab/nsp3595E595GgAggGg11AY.540.000095
ORF1ab/nsp3595E595DgaGgaT11AY.580.000907
ORF1ab/nsp3595E595EgaGgaA11AY.590.00053
ORF1ab/nsp3595E595delGAG---11AY.60.000041
ORF1ab/nsp3595E595del2GAg--g11AY.600.000938
ORF1ab/nsp3595E595delGAG---11AY.650.000533
ORF1ab/nsp3595E595del2gAGg--11AY.660.00107
ORF1ab/nsp3595E595delGAG---11AY.670.000464
ORF1ab/nsp3595E595delGAG---11AY.680.000274
ORF1ab/nsp3595E595DgaGgaT11AY.690.000187
ORF1ab/nsp3595E595DgaGgaT11AY.70.000196
ORF1ab/nsp3595E595DgaGgaT11AY.7.10.000113
ORF1ab/nsp3595E595HGaGCaC11AY.7.20.000559
ORF1ab/nsp3595E595XGaGTaA11AY.710.000475
ORF1ab/nsp3595E595DgaGgaT11AY.730.000665
ORF1ab/nsp3595E595EgaGgaA11AY.740.000116
ORF1ab/nsp3595E595EgaGgaA11AY.75.10.00018
ORF1ab/nsp3595E595DgaGgaT11AY.75.10.00018
ORF1ab/nsp3595E595DgaGgaT11AY.770.001127
ORF1ab/nsp3595E595DgaGgaT11AY.800.001129
ORF1ab/nsp3595E595XGagTag11AY.90.000068
ORF1ab/nsp3595E595DgaGgaT11AY.9.10.000084
ORF1ab/nsp3595E595HGaGCaT11AY.9.10.000084
ORF1ab/nsp3595E595delGAG---11AY.9.20.000037
ORF1ab/nsp3595E595DgaGgaT11AY.9.20.000037
ORF1ab/nsp3595E595DgaGgaT11AY.940.000443
ORF1ab/nsp3595E595delGAG---11AY.950.000761
ORF1ab/nsp3595E595EgaGgaA11AY.970.001701
ORF1ab/nsp3595E595VgAggTg11AY.98.10.000048
ORF1ab/nsp3595E595DgaGgaT11AY.98.10.000048
ORF1ab/nsp3595E595KGagAag11AY.98.10.000048
ORF1ab/nsp3595E595delGAG---11AY.990.001049
ORF1ab/nsp3595E595EgaGgaA11AY.99.20.000092
ORF1ab/nsp3595E595XGagTag11B0.000128
ORF1ab/nsp3595E595del1GAG-GA11B0.000128
ORF1ab/nsp3595E595DgaGgaT11B0.000128
ORF1ab/nsp3595E595del1gaGga-11B.10.000009
ORF1ab/nsp3595E595QGagCag11B.10.000009
ORF1ab/nsp3595E595delGAG---11B.1.10.000018
ORF1ab/nsp3595E595QGagCag11B.1.10.000018
ORF1ab/nsp3595E595VgAggTg11B.1.10.000018
ORF1ab/nsp3595E595GgAggGg11B.1.10.000018
ORF1ab/nsp3595E595DgaGgaT11B.1.1.10.000327
ORF1ab/nsp3595E595delGAG---11B.1.1.1420.017544
ORF1ab/nsp3595E595DgaGgaT11B.1.1.1530.001095
ORF1ab/nsp3595E595KGagAag11B.1.1.1760.000439
ORF1ab/nsp3595E595DgaGgaT11B.1.1.1920.002309
ORF1ab/nsp3595E595DgaGgaT11B.1.1.1960.005714
ORF1ab/nsp3595E595EgaGgaA11B.1.1.1980.001468
ORF1ab/nsp3595E595DgaGgaC11B.1.1.2070.001182
ORF1ab/nsp3595E595DgaGgaT11B.1.1.2220.000204
ORF1ab/nsp3595E595DgaGgaT11B.1.1.2240.014286
ORF1ab/nsp3595E595delGAG---11B.1.1.2320.001815
ORF1ab/nsp3595E595EgaGgaA11B.1.1.3110.000358
ORF1ab/nsp3595E595delGAG---11B.1.1.3150.008475
ORF1ab/nsp3595E595SGAGTCT11B.1.1.3170.000412
ORF1ab/nsp3595E595DgaGgaT11B.1.1.3170.000412
ORF1ab/nsp3595E595DgaGgaT11B.1.1.3890.006061
ORF1ab/nsp3595E595delGAG---11B.1.1.3970.002252
ORF1ab/nsp3595E595delGAG---11B.1.1.4090.002833
ORF1ab/nsp3595E595DgaGgaT11B.1.1.4640.001473
ORF1ab/nsp3595E595DgaGgaT11B.1.1.5230.001563
ORF1ab/nsp3595E595RGAGCGC11B.1.1.70.000001
ORF1ab/nsp3595E595XGagTag11B.1.1.700.000341
ORF1ab/nsp3595E595DgaGgaT11B.1.1510.011111
ORF1ab/nsp3595E595XGagTag11B.1.1570.002985
ORF1ab/nsp3595E595delGAG---11B.1.1570.002985
ORF1ab/nsp3595E595VgAggTg11B.1.1600.000031
ORF1ab/nsp3595E595DgaGgaT11B.1.160.160.000929
ORF1ab/nsp3595E595DgaGgaT11B.1.160.260.002421
ORF1ab/nsp3595E595EgaGgaA11B.1.160.310.008065
ORF1ab/nsp3595E595del2gAGg--11B.1.1770.000013
ORF1ab/nsp3595E595del1gAgg-g11B.1.1770.000013
ORF1ab/nsp3595E595GgAggGg11B.1.1770.000013
ORF1ab/nsp3595E595NGaGAaT11B.1.1770.000013
ORF1ab/nsp3595E595delGAG---11B.1.177.170.000821
ORF1ab/nsp3595E595delGAG---11B.1.177.190.001431
ORF1ab/nsp3595E595XGagTag11B.1.177.460.000918
ORF1ab/nsp3595E595delGAG---11B.1.177.510.004566
ORF1ab/nsp3595E595delGAG---11B.1.177.630.002703
ORF1ab/nsp3595E595DgaGgaT11B.1.177.70.000165
ORF1ab/nsp3595E595DgaGgaT11B.1.177.860.000183
ORF1ab/nsp3595E595delGAG---11B.1.177.870.000728
ORF1ab/nsp3595E595DgaGgaT11B.1.177.90.001332
ORF1ab/nsp3595E595DgaGgaT11B.1.1890.004292
ORF1ab/nsp3595E595delGAG---11B.1.20.000009
ORF1ab/nsp3595E595del1gaGga-11B.1.20.000009
ORF1ab/nsp3595E595GgAggGg11B.1.20.000009
ORF1ab/nsp3595E595delGAG---11B.1.2210.000071
ORF1ab/nsp3595E595delGAG---11B.1.230.006061
ORF1ab/nsp3595E595EgaGgaA11B.1.2320.000537
ORF1ab/nsp3595E595KGaGAaA11B.1.2340.000132
ORF1ab/nsp3595E595GgAggGg11B.1.2430.00007
ORF1ab/nsp3595E595DgaGgaT11B.1.2430.00007
ORF1ab/nsp3595E595GgAggGg11B.1.2580.000067
ORF1ab/nsp3595E595DgaGgaT11B.1.258.70.001912
ORF1ab/nsp3595E595EgaGgaA11B.1.2650.001271
ORF1ab/nsp3595E595EgaGgaA11B.1.2980.002114
ORF1ab/nsp3595E595XGagTag11B.1.3010.005917
ORF1ab/nsp3595E595delGAG---11B.1.3190.003049
ORF1ab/nsp3595E595EgaGgaA11B.1.3510.00003
ORF1ab/nsp3595E595GgAggGg11B.1.3510.00003
ORF1ab/nsp3595E595delGAG---11B.1.360.000146
ORF1ab/nsp3595E595del1gaGga-11B.1.36.100.004785
ORF1ab/nsp3595E595VgAggTg11B.1.36.100.004785
ORF1ab/nsp3595E595delGAG---11B.1.36.170.000494
ORF1ab/nsp3595E595XGagTag11B.1.36.170.000494
ORF1ab/nsp3595E595EgaGgaA11B.1.36.180.00042
ORF1ab/nsp3595E595DgaGgaT11B.1.36.220.001208
ORF1ab/nsp3595E595DgaGgaT11B.1.36.310.001751
ORF1ab/nsp3595E595delGAG---11B.1.36.350.002604
ORF1ab/nsp3595E595DgaGgaT11B.1.4270.00005
ORF1ab/nsp3595E595DgaGgaT11B.1.438.10.000107
ORF1ab/nsp3595E595DgaGgaT11B.1.4430.004673
ORF1ab/nsp3595E595DgaGgaT11B.1.4530.003236
ORF1ab/nsp3595E595DgaGgaT11B.1.4590.004082
ORF1ab/nsp3595E595GgAggGg11B.1.5170.000427
ORF1ab/nsp3595E595VgAggTg11B.1.5170.000427
ORF1ab/nsp3595E595XGagTag11B.1.5210.004975
ORF1ab/nsp3595E595EgaGgaA11B.1.5260.000024
ORF1ab/nsp3595E595GgAggGg11B.1.5260.000024
ORF1ab/nsp3595E595DgaGgaT11B.1.5320.006211
ORF1ab/nsp3595E595DgaGgaT11B.1.5440.006024
ORF1ab/nsp3595E595DgaGgaT11B.1.5610.000397
ORF1ab/nsp3595E595VgAGgTA11B.1.5750.000303
ORF1ab/nsp3595E595EgaGgaA11B.1.5770.000687
ORF1ab/nsp3595E595DgaGgaT11B.1.5870.001898
ORF1ab/nsp3595E595DgaGgaT11B.1.5880.00091
ORF1ab/nsp3595E595del1Gag-ag11B.1.5960.000087
ORF1ab/nsp3595E595EgaGgaA11B.1.5960.000087
ORF1ab/nsp3595E595DgaGgaT11B.1.5990.00365
ORF1ab/nsp3595E595DgaGgaT11B.1.6000.005848
ORF1ab/nsp3595E595DgaGgaT11B.1.6090.000479
ORF1ab/nsp3595E595XGagTag11B.1.617.10.000129
ORF1ab/nsp3595E595QGagCag11B.1.617.10.000129
ORF1ab/nsp3595E595VgAGgTC11B.1.617.20.000004
ORF1ab/nsp3595E595del2gAGg--11B.1.617.20.000004
ORF1ab/nsp3595E595del1gaGga-11B.1.617.20.000004
ORF1ab/nsp3595E595delGAG---11B.1.617.30.002985
ORF1ab/nsp3595E595VgAGgTT11B.1.6190.000871
ORF1ab/nsp3595E595DgaGgaT11B.1.9.50.005682
ORF1ab/nsp3595E595delGAG---11B.150.017544
ORF1ab/nsp3595E595DgaGgaT11B.270.015385
ORF1ab/nsp3595E595EgaGgaA11B.290.003509
ORF1ab/nsp3595E595XGagTag11B.60.00091
ORF1ab/nsp3595E595DgaGgaT11C.10.002392
ORF1ab/nsp3595E595GgAggGg11C.360.000911
ORF1ab/nsp3595E595delGAG---11C.360.000911
ORF1ab/nsp3595E595SGAGTCT11C.36.30.000567
ORF1ab/nsp3595E595DgaGgaT11C.36.30.000567
ORF1ab/nsp3595E595AgAGgCA11C.36.30.000567
ORF1ab/nsp3595E595AgAggCg11C.370.000116
ORF1ab/nsp3595E595EgaGgaA11D.20.000075
ORF1ab/nsp3595E595GgAggGg11D.20.000075
ORF1ab/nsp3595E595XGagTag11D.20.000075
ORF1ab/nsp3595E595EgaGgaA11N.40.004255
ORF1ab/nsp3595E595DgaGgaT11N.50.001767
ORF1ab/nsp3595E595VgAggTg11N.50.001767
ORF1ab/nsp3595E595GgAggGg11P.10.000016
ORF1ab/nsp3595E595EgaGgaA11P.10.000016
ORF1ab/nsp3595E595AgAggCg11P.10.000016
ORF1ab/nsp3595E595delGAG---11P.1.10.000318
ORF1ab/nsp3595E595AgAggCg11P.1.10.000318
ORF1ab/nsp3595E595DgaGgaT11P.1.110.010204
ORF1ab/nsp3595E595GgAggGg11P.1.170.000162
ORF1ab/nsp3595E595DgaGgaT11P.1.20.001156
ORF1ab/nsp3595E595delGAG---11P.1.40.000977
ORF1ab/nsp3595E595DgaGgaT11P.1.70.000319
ORF1ab/nsp3595E595DgaGgaT11P.20.000187
ORF1ab/nsp3595E595EgaGgaA11P.30.001595
ORF1ab/nsp3595E595EgaGgaA11Q.10.000126
ORF1ab/nsp3595E595VgAggTg11Q.10.000126
ORF1ab/nsp3595E595delGAG---11Q.80.000165
ORF1ab/nsp3595E595delGAG---11R.10.00009